RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 A8MU10 97 aa4.37□□□□□ -1.71
TRAPPC9-203ENST00000517667 PMAIP1Q13794 54 aa4.37□□□□□ -1.71
TRAPPC9-203ENST00000517667 SPINT4Q6UDR6 99 aa4.35□□□□□ -1.71
TRAPPC9-203ENST00000517667 HMCN1Q96RW7 5635 aa4.35□□□□□ -1.71
TRAPPC9-203ENST00000517667 KRTAP19-3Q7Z4W3 81 aa4.34□□□□□ -1.71
TRAPPC9-203ENST00000517667 LCE4AQ5TA78 99 aa4.32□□□□□ -1.72
TRAPPC9-203ENST00000517667 MT4P47944 62 aa4.3□□□□□ -1.72
TRAPPC9-203ENST00000517667 KRTAP12-1P59990 96 aa4.29□□□□□ -1.72
TRAPPC9-203ENST00000517667 KRTAP19-7Q3SYF9 63 aa4.29□□□□□ -1.72
TRAPPC9-203ENST00000517667 KRTAP5-10Q6L8G5 202 aa4.29□□□□□ -1.72
TRAPPC9-203ENST00000517667 MT1EP04732 61 aa4.28□□□□□ -1.72
TRAPPC9-203ENST00000517667 AHNAK2Q8IVF2 5795 aa4.26□□□□□ -1.73
TRAPPC9-203ENST00000517667 CAMK2N1Q7Z7J9 78 aa4.26□□□□□ -1.73
TRAPPC9-203ENST00000517667 MT1GP13640 62 aa4.21□□□□□ -1.74
TRAPPC9-203ENST00000517667 ROMO1P60602 79 aa4.21□□□□□ -1.74
TRAPPC9-203ENST00000517667 PP632Q6XCG6 107 aa4.21□□□□□ -1.74
TRAPPC9-203ENST00000517667 KRTAP4-12Q9BQ66 201 aa4.21□□□□□ -1.74
TRAPPC9-203ENST00000517667 KTN1-AS1Q86SY8 53 aa4.2□□□□□ -1.74
TRAPPC9-203ENST00000517667 KRTAP5-7Q6L8G8 165 aa4.19□□□□□ -1.74
TRAPPC9-203ENST00000517667 KRTAP9-9Q9BYP9 154 aa4.16□□□□□ -1.74
TRAPPC9-203ENST00000517667 KRTAP9-4Q9BYQ2 154 aa4.16□□□□□ -1.74
TRAPPC9-203ENST00000517667 KRTAP5-4Q6L8H1 288 aa4.15□□□□□ -1.75
TRAPPC9-203ENST00000517667 MT1MQ8N339 61 aa4.11□□□□□ -1.75
TRAPPC9-203ENST00000517667 KRTAP5-3Q6L8H2 238 aa4.1□□□□□ -1.75
TRAPPC9-203ENST00000517667 KRTAP19-5Q3LI72 72 aa4.08□□□□□ -1.76
TRAPPC9-203ENST00000517667 SVIPQ8NHG7 77 aa4.08□□□□□ -1.76
TRAPPC9-203ENST00000517667 KRTAP25-1Q3LHN0 102 aa4.07□□□□□ -1.76
TRAPPC9-203ENST00000517667 TNP1P09430 55 aa4.05□□□□□ -1.76
TRAPPC9-203ENST00000517667 MT1LQ93083 61 aa4.03□□□□□ -1.76
TRAPPC9-203ENST00000517667 SPRR5A0A1B0GTR4 108 aa4.01□□□□□ -1.77
TRAPPC9-203ENST00000517667 C10orf95Q9H7T3 257 aa4.01□□□□□ -1.77
TRAPPC9-203ENST00000517667 KRTAP4-7Q9BYR0 210 aa4□□□□□ -1.77
TRAPPC9-203ENST00000517667 KRTAP4-3Q9BYR4 195 aa3.98□□□□□ -1.77
TRAPPC9-203ENST00000517667 PRAC1Q96KF2 57 aa3.97□□□□□ -1.77
TRAPPC9-203ENST00000517667 KRTAP23-1A1A580 65 aa3.95□□□□□ -1.78
TRAPPC9-203ENST00000517667 KRTAP20-2Q3LI61 65 aa3.94□□□□□ -1.78
TRAPPC9-203ENST00000517667 KRTAP12-4P60329 112 aa3.83□□□□□ -1.8
TRAPPC9-203ENST00000517667 KRTAP4-2Q9BYR5 136 aa3.82□□□□□ -1.8
TRAPPC9-203ENST00000517667 LCE3AQ5TA76 89 aa3.8□□□□□ -1.8
TRAPPC9-203ENST00000517667 KRTAP5-5Q701N2 237 aaPredicted RBP3.8□□□□□ -1.8
TRAPPC9-203ENST00000517667 SYNE1Q8NF91 8797 aaKnown RBP3.74□□□□□ -1.81
TRAPPC9-203ENST00000517667 KRTAP4-11Q9BYQ6 195 aa3.71□□□□□ -1.82
TRAPPC9-203ENST00000517667 KRTAP12-3P60328 96 aa3.68□□□□□ -1.82
TRAPPC9-203ENST00000517667 AHNAKQ09666 5890 aaKnown RBP3.68□□□□□ -1.82
TRAPPC9-203ENST00000517667 MUC5ACP98088 5654 aa3.65□□□□□ -1.82
TRAPPC9-203ENST00000517667 MUC5BQ9HC84 5762 aaPredicted RBP3.61□□□□□ -1.83
TRAPPC9-203ENST00000517667 KRTAP19-4Q3LI73 84 aa3.59□□□□□ -1.83
TRAPPC9-203ENST00000517667 KRTAP15-1Q3LI76 137 aa3.59□□□□□ -1.83
TRAPPC9-203ENST00000517667 H3BS24 57 aa3.57□□□□□ -1.84
TRAPPC9-203ENST00000517667 KRTAP5-8O75690 187 aa3.57□□□□□ -1.84
TRAPPC9-203ENST00000517667 KRTAP5-2Q701N4 177 aa3.57□□□□□ -1.84
TRAPPC9-203ENST00000517667 OBSCNQ5VST9 7968 aa3.47□□□□□ -1.85
TRAPPC9-203ENST00000517667 LUZP6Q538Z0 58 aa3.46□□□□□ -1.86
TRAPPC9-203ENST00000517667 MT1AP04731 61 aa3.43□□□□□ -1.86
TRAPPC9-203ENST00000517667 KRTAP6-1Q3LI64 71 aa3.41□□□□□ -1.86
TRAPPC9-203ENST00000517667 LCE3CQ5T5A8 94 aa3.4□□□□□ -1.87
TRAPPC9-203ENST00000517667 KRTAP6-2Q3LI66 62 aa3.35□□□□□ -1.87
TRAPPC9-203ENST00000517667 KRTAP5-1Q6L8H4 278 aa3.26□□□□□ -1.89
TRAPPC9-203ENST00000517667 NDUFAF8A1L188 74 aa3.23□□□□□ -1.89
TRAPPC9-203ENST00000517667 MT3P25713 68 aa3.17□□□□□ -1.9
TRAPPC9-203ENST00000517667 KRTAP9-6A8MVA2 160 aa3.13□□□□□ -1.91
TRAPPC9-203ENST00000517667 LCE1EQ5T753 118 aa3.01□□□□□ -1.93
TRAPPC9-203ENST00000517667 A0A0A0MQY5 61 aa2.99□□□□□ -1.93
TRAPPC9-203ENST00000517667 LCE1BQ5T7P3 118 aa2.83□□□□□ -1.96
TRAPPC9-203ENST00000517667 LCE1CQ5T751 118 aa2.79□□□□□ -1.96
TRAPPC9-203ENST00000517667 INE1O15225 51 aa2.78□□□□□ -1.96
TRAPPC9-203ENST00000517667 LCE1FQ5T754 118 aa2.61□□□□□ -1.99
TRAPPC9-203ENST00000517667 KRTAP5-11Q6L8G4 156 aa2.61□□□□□ -1.99
TRAPPC9-203ENST00000517667 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.59□□□□□ -1.99
TRAPPC9-203ENST00000517667 LCE3DQ9BYE3 92 aa2.58□□□□□ -2
TRAPPC9-203ENST00000517667 PHGR1C9JFL3 82 aa2.53□□□□□ -2
TRAPPC9-203ENST00000517667 LCE3EQ5T5B0 92 aa2.52□□□□□ -2.01
TRAPPC9-203ENST00000517667 KRTAP21-2Q3LI59 83 aa2.26□□□□□ -2.05
TRAPPC9-203ENST00000517667 KRTAP4-4Q9BYR3 166 aa2.18□□□□□ -2.06
TRAPPC9-203ENST00000517667 MUC19Q7Z5P9 8384 aa2.17□□□□□ -2.06
TRAPPC9-203ENST00000517667 PRM1P04553 51 aa2.14□□□□□ -2.07
TRAPPC9-203ENST00000517667 KRTAP21-1Q3LI58 79 aa1.94□□□□□ -2.1
TRAPPC9-203ENST00000517667 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 104.4 ms