RNA–Protein interactions for RNA: ENST00000517534.5

CTNNA1-203, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-203ENST00000517534 MT1EP04732 61 aa3.13□□□□□ -1.91
CTNNA1-203ENST00000517534 KRTAP19-3Q7Z4W3 81 aa3.13□□□□□ -1.91
CTNNA1-203ENST00000517534 AHNAK2Q8IVF2 5795 aa3.12□□□□□ -1.91
CTNNA1-203ENST00000517534 LCE1FQ5T754 118 aa3.11□□□□□ -1.91
CTNNA1-203ENST00000517534 RPS28P62857 69 aaKnown RBP3.1□□□□□ -1.91
CTNNA1-203ENST00000517534 KRTAP13-4Q3LI77 160 aa3.1□□□□□ -1.91
CTNNA1-203ENST00000517534 KRTAP5-1Q6L8H4 278 aa3.08□□□□□ -1.92
CTNNA1-203ENST00000517534 SPTSSBQ8NFR3 76 aa3.08□□□□□ -1.92
CTNNA1-203ENST00000517534 SMIM26A0A096LP01 95 aa3.05□□□□□ -1.92
CTNNA1-203ENST00000517534 CAMK2N1Q7Z7J9 78 aa3.05□□□□□ -1.92
CTNNA1-203ENST00000517534 KRTAP5-4Q6L8H1 288 aa3.04□□□□□ -1.92
CTNNA1-203ENST00000517534 MT1GP13640 62 aa3.03□□□□□ -1.92
CTNNA1-203ENST00000517534 KRTAP4-4Q9BYR3 166 aa3.03□□□□□ -1.92
CTNNA1-203ENST00000517534 KRTAP19-5Q3LI72 72 aa3.02□□□□□ -1.93
CTNNA1-203ENST00000517534 KRTAP5-10Q6L8G5 202 aa3.02□□□□□ -1.93
CTNNA1-203ENST00000517534 LINC01558Q9Y6Z2 57 aa3.02□□□□□ -1.93
CTNNA1-203ENST00000517534 MT4P47944 62 aa3.01□□□□□ -1.93
CTNNA1-203ENST00000517534 Q1T7F1 81 aa3.01□□□□□ -1.93
CTNNA1-203ENST00000517534 A0A0D9SG42 100 aa3□□□□□ -1.93
CTNNA1-203ENST00000517534 V9GYY9 64 aa3□□□□□ -1.93
CTNNA1-203ENST00000517534 A0A1B0GU69 56 aa2.99□□□□□ -1.93
CTNNA1-203ENST00000517534 MT1MQ8N339 61 aa2.99□□□□□ -1.93
CTNNA1-203ENST00000517534 PRR15LQ9BU68 103 aa2.99□□□□□ -1.93
CTNNA1-203ENST00000517534 PSPHP1O15172 72 aa2.98□□□□□ -1.93
CTNNA1-203ENST00000517534 SEC61GP60059 68 aa2.98□□□□□ -1.93
CTNNA1-203ENST00000517534 PP632Q6XCG6 107 aa2.97□□□□□ -1.93
CTNNA1-203ENST00000517534 MT1LQ93083 61 aa2.96□□□□□ -1.94
CTNNA1-203ENST00000517534 KRTAP5-7Q6L8G8 165 aa2.94□□□□□ -1.94
CTNNA1-203ENST00000517534 KRTAP4-3Q9BYR4 195 aa2.94□□□□□ -1.94
CTNNA1-203ENST00000517534 A0A1B0GU33 70 aa2.92□□□□□ -1.94
CTNNA1-203ENST00000517534 LCE3CQ5T5A8 94 aa2.92□□□□□ -1.94
CTNNA1-203ENST00000517534 SPATA8Q6RVD6 105 aa2.91□□□□□ -1.94
CTNNA1-203ENST00000517534 SPINT4Q6UDR6 99 aa2.91□□□□□ -1.94
CTNNA1-203ENST00000517534 SYNE1Q8NF91 8797 aaKnown RBP2.9□□□□□ -1.94
CTNNA1-203ENST00000517534 KRTAP12-1P59990 96 aa2.9□□□□□ -1.95
CTNNA1-203ENST00000517534 A6NED7 52 aa2.88□□□□□ -1.95
CTNNA1-203ENST00000517534 UQCR11O14957 56 aa2.88□□□□□ -1.95
CTNNA1-203ENST00000517534 C10orf95Q9H7T3 257 aa2.86□□□□□ -1.95
CTNNA1-203ENST00000517534 A8MU10 97 aa2.85□□□□□ -1.95
CTNNA1-203ENST00000517534 MIR22HGQ0VDD5 57 aa2.85□□□□□ -1.95
CTNNA1-203ENST00000517534 LCE3AQ5TA76 89 aa2.85□□□□□ -1.95
CTNNA1-203ENST00000517534 CDC42SE1Q9NRR8 79 aa2.82□□□□□ -1.96
CTNNA1-203ENST00000517534 BRK1Q8WUW1 75 aa2.81□□□□□ -1.96
CTNNA1-203ENST00000517534 SPRR5A0A1B0GTR4 108 aa2.8□□□□□ -1.96
CTNNA1-203ENST00000517534 KRTAP20-2Q3LI61 65 aa2.79□□□□□ -1.96
CTNNA1-203ENST00000517534 LCE1EQ5T753 118 aa2.79□□□□□ -1.96
CTNNA1-203ENST00000517534 TNP1P09430 55 aa2.78□□□□□ -1.96
CTNNA1-203ENST00000517534 KRTAP5-5Q701N2 237 aaPredicted RBP2.77□□□□□ -1.97
CTNNA1-203ENST00000517534 KRTAP12-3P60328 96 aa2.74□□□□□ -1.97
CTNNA1-203ENST00000517534 K7ERS5 55 aa2.72□□□□□ -1.97
CTNNA1-203ENST00000517534 KRTAP12-4P60329 112 aa2.7□□□□□ -1.98
CTNNA1-203ENST00000517534 PRO0628Q9UI54 55 aa2.69□□□□□ -1.98
CTNNA1-203ENST00000517534 LCE3EQ5T5B0 92 aa2.68□□□□□ -1.98
CTNNA1-203ENST00000517534 AHNAKQ09666 5890 aaKnown RBP2.66□□□□□ -1.98
CTNNA1-203ENST00000517534 KRTAP5-2Q701N4 177 aa2.65□□□□□ -1.99
CTNNA1-203ENST00000517534 MUC5BQ9HC84 5762 aaPredicted RBP2.64□□□□□ -1.99
CTNNA1-203ENST00000517534 PMAIP1Q13794 54 aa2.64□□□□□ -1.99
CTNNA1-203ENST00000517534 ROMO1P60602 79 aa2.61□□□□□ -1.99
CTNNA1-203ENST00000517534 OBSCNQ5VST9 7968 aa2.58□□□□□ -2
CTNNA1-203ENST00000517534 KRTAP9-6A8MVA2 160 aa2.58□□□□□ -2
CTNNA1-203ENST00000517534 MUC5ACP98088 5654 aa2.57□□□□□ -2
CTNNA1-203ENST00000517534 KRTAP25-1Q3LHN0 102 aa2.54□□□□□ -2
CTNNA1-203ENST00000517534 KRTAP5-8O75690 187 aa2.52□□□□□ -2.01
CTNNA1-203ENST00000517534 MT1AP04731 61 aa2.51□□□□□ -2.01
CTNNA1-203ENST00000517534 KRTAP6-1Q3LI64 71 aa2.51□□□□□ -2.01
CTNNA1-203ENST00000517534 KTN1-AS1Q86SY8 53 aa2.51□□□□□ -2.01
CTNNA1-203ENST00000517534 KRTAP6-2Q3LI66 62 aa2.43□□□□□ -2.02
CTNNA1-203ENST00000517534 LUZP6Q538Z0 58 aa2.34□□□□□ -2.03
CTNNA1-203ENST00000517534 LCE3DQ9BYE3 92 aa2.28□□□□□ -2.04
CTNNA1-203ENST00000517534 LCE1BQ5T7P3 118 aa2.03□□□□□ -2.08
CTNNA1-203ENST00000517534 LCE1CQ5T751 118 aa2.01□□□□□ -2.09
CTNNA1-203ENST00000517534 PHGR1C9JFL3 82 aa1.76□□□□□ -2.13
CTNNA1-203ENST00000517534 KRTAP21-2Q3LI59 83 aa1.67□□□□□ -2.14
CTNNA1-203ENST00000517534 MUC19Q7Z5P9 8384 aa1.63□□□□□ -2.15
CTNNA1-203ENST00000517534 INE1O15225 51 aa1.58□□□□□ -2.16
CTNNA1-203ENST00000517534 PRM1P04553 51 aa1.38□□□□□ -2.19
CTNNA1-203ENST00000517534 KRTAP21-1Q3LI58 79 aa1.35□□□□□ -2.19
CTNNA1-203ENST00000517534 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 108.3 ms