RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 SPRR2FQ96RM1 72 aa3.75□□□□□ -1.81
CLN8-202ENST00000517514 KRTAP19-7Q3SYF9 63 aa3.73□□□□□ -1.81
CLN8-202ENST00000517514 LCE3AQ5TA76 89 aa3.73□□□□□ -1.81
CLN8-202ENST00000517514 NEBP20929 6669 aa3.7□□□□□ -1.82
CLN8-202ENST00000517514 KRTAP25-1Q3LHN0 102 aa3.69□□□□□ -1.82
CLN8-202ENST00000517514 KRTAP19-5Q3LI72 72 aa3.68□□□□□ -1.82
CLN8-202ENST00000517514 BRK1Q8WUW1 75 aa3.68□□□□□ -1.82
CLN8-202ENST00000517514 LCE1AQ5T7P2 110 aa3.67□□□□□ -1.82
CLN8-202ENST00000517514 MT1EP04732 61 aa3.66□□□□□ -1.82
CLN8-202ENST00000517514 ROMO1P60602 79 aa3.66□□□□□ -1.82
CLN8-202ENST00000517514 SPRR2EP22531 72 aa3.63□□□□□ -1.83
CLN8-202ENST00000517514 SPRR2BP35325 72 aa3.63□□□□□ -1.83
CLN8-202ENST00000517514 SPRR2AP35326 72 aa3.63□□□□□ -1.83
CLN8-202ENST00000517514 KRTAP23-1A1A580 65 aa3.61□□□□□ -1.83
CLN8-202ENST00000517514 KRTAP12-3P60328 96 aa3.55□□□□□ -1.84
CLN8-202ENST00000517514 KRTAP19-3Q7Z4W3 81 aa3.55□□□□□ -1.84
CLN8-202ENST00000517514 MT1LQ93083 61 aa3.55□□□□□ -1.84
CLN8-202ENST00000517514 SPRR2DP22532 72 aa3.5□□□□□ -1.85
CLN8-202ENST00000517514 MT1GP13640 62 aa3.49□□□□□ -1.85
CLN8-202ENST00000517514 KRTAP5-3Q6L8H2 238 aa3.47□□□□□ -1.85
CLN8-202ENST00000517514 PMAIP1Q13794 54 aa3.46□□□□□ -1.86
CLN8-202ENST00000517514 PP632Q6XCG6 107 aa3.46□□□□□ -1.86
CLN8-202ENST00000517514 MT1MQ8N339 61 aa3.46□□□□□ -1.86
CLN8-202ENST00000517514 PRO0628Q9UI54 55 aa3.46□□□□□ -1.86
CLN8-202ENST00000517514 KRTAP20-1Q3LI63 56 aa3.44□□□□□ -1.86
CLN8-202ENST00000517514 KRTAP15-1Q3LI76 137 aa3.44□□□□□ -1.86
CLN8-202ENST00000517514 KRTAP2-3P0C7H8 128 aa3.43□□□□□ -1.86
CLN8-202ENST00000517514 KRTAP2-4Q9BYR9 128 aa3.43□□□□□ -1.86
CLN8-202ENST00000517514 KRTAP4-3Q9BYR4 195 aa3.41□□□□□ -1.86
CLN8-202ENST00000517514 PRAC1Q96KF2 57 aa3.35□□□□□ -1.87
CLN8-202ENST00000517514 DSTQ03001 7570 aaKnown RBP3.35□□□□□ -1.87
CLN8-202ENST00000517514 KRTAP2-2Q9BYT5 123 aa3.34□□□□□ -1.87
CLN8-202ENST00000517514 KRTAP2-1Q9BYU5 128 aa3.34□□□□□ -1.87
CLN8-202ENST00000517514 LCE3CQ5T5A8 94 aa3.31□□□□□ -1.88
CLN8-202ENST00000517514 KTN1-AS1Q86SY8 53 aa3.24□□□□□ -1.89
CLN8-202ENST00000517514 KRTAP9-6A8MVA2 160 aa3.2□□□□□ -1.9
CLN8-202ENST00000517514 KRTAP5-5Q701N2 237 aaPredicted RBP3.18□□□□□ -1.9
CLN8-202ENST00000517514 KRTAP5-4Q6L8H1 288 aa3.16□□□□□ -1.9
CLN8-202ENST00000517514 HMCN1Q96RW7 5635 aa3.07□□□□□ -1.92
CLN8-202ENST00000517514 SYNE1Q8NF91 8797 aaKnown RBP3.06□□□□□ -1.92
CLN8-202ENST00000517514 SPRR5A0A1B0GTR4 108 aa3.05□□□□□ -1.92
CLN8-202ENST00000517514 MT4P47944 62 aa3.04□□□□□ -1.92
CLN8-202ENST00000517514 MT1AP04731 61 aa3.01□□□□□ -1.93
CLN8-202ENST00000517514 KRTAP6-1Q3LI64 71 aa3.01□□□□□ -1.93
CLN8-202ENST00000517514 KRTAP20-2Q3LI61 65 aa2.95□□□□□ -1.94
CLN8-202ENST00000517514 KRTAP12-4P60329 112 aa2.93□□□□□ -1.94
CLN8-202ENST00000517514 AHNAK2Q8IVF2 5795 aa2.91□□□□□ -1.94
CLN8-202ENST00000517514 A0A0A0MQY5 61 aa2.84□□□□□ -1.95
CLN8-202ENST00000517514 KRTAP5-2Q701N4 177 aa2.83□□□□□ -1.96
CLN8-202ENST00000517514 KRTAP6-2Q3LI66 62 aa2.79□□□□□ -1.96
CLN8-202ENST00000517514 GPR98Q8WXG9 6306 aa2.78□□□□□ -1.96
CLN8-202ENST00000517514 KRTAP5-10Q6L8G5 202 aa2.73□□□□□ -1.97
CLN8-202ENST00000517514 MT3P25713 68 aa2.7□□□□□ -1.98
CLN8-202ENST00000517514 LUZP6Q538Z0 58 aa2.65□□□□□ -1.99
CLN8-202ENST00000517514 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.65□□□□□ -1.99
CLN8-202ENST00000517514 KRTAP5-11Q6L8G4 156 aa2.62□□□□□ -1.99
CLN8-202ENST00000517514 LCE1EQ5T753 118 aa2.57□□□□□ -2
CLN8-202ENST00000517514 KRTAP5-7Q6L8G8 165 aa2.57□□□□□ -2
CLN8-202ENST00000517514 KRTAP5-8O75690 187 aa2.55□□□□□ -2
CLN8-202ENST00000517514 OBSCNQ5VST9 7968 aa2.55□□□□□ -2
CLN8-202ENST00000517514 KRTAP5-1Q6L8H4 278 aa2.49□□□□□ -2.01
CLN8-202ENST00000517514 MUC5ACP98088 5654 aa2.46□□□□□ -2.02
CLN8-202ENST00000517514 NDUFAF8A1L188 74 aa2.46□□□□□ -2.02
CLN8-202ENST00000517514 LCE1FQ5T754 118 aa2.43□□□□□ -2.02
CLN8-202ENST00000517514 LCE3DQ9BYE3 92 aa2.42□□□□□ -2.02
CLN8-202ENST00000517514 LCE3EQ5T5B0 92 aa2.32□□□□□ -2.04
CLN8-202ENST00000517514 MUC5BQ9HC84 5762 aaPredicted RBP2.31□□□□□ -2.04
CLN8-202ENST00000517514 AHNAKQ09666 5890 aaKnown RBP2.3□□□□□ -2.04
CLN8-202ENST00000517514 LCE1CQ5T751 118 aa2.27□□□□□ -2.05
CLN8-202ENST00000517514 LCE1BQ5T7P3 118 aa2.27□□□□□ -2.05
CLN8-202ENST00000517514 KRTAP4-4Q9BYR3 166 aa2.13□□□□□ -2.07
CLN8-202ENST00000517514 KRTAP21-2Q3LI59 83 aa1.99□□□□□ -2.09
CLN8-202ENST00000517514 INE1O15225 51 aa1.98□□□□□ -2.09
CLN8-202ENST00000517514 PRM1P04553 51 aa1.91□□□□□ -2.1
CLN8-202ENST00000517514 PHGR1C9JFL3 82 aa1.75□□□□□ -2.13
CLN8-202ENST00000517514 MUC19Q7Z5P9 8384 aa1.57□□□□□ -2.16
CLN8-202ENST00000517514 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
CLN8-202ENST00000517514 KRTAP21-1Q3LI58 79 aa1.15□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 39.6 ms