RNA–Protein interactions for RNA: ENST00000515982.1

SCARNA6-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 265 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6-201ENST00000515982 KRTAP4-8Q9BYQ9 185 aa2.74□□□□□ -1.97
SCARNA6-201ENST00000515982 SPRR2FQ96RM1 72 aa2.72□□□□□ -1.97
SCARNA6-201ENST00000515982 GPR98Q8WXG9 6306 aa2.71□□□□□ -1.98
SCARNA6-201ENST00000515982 LCE1AQ5T7P2 110 aa2.7□□□□□ -1.98
SCARNA6-201ENST00000515982 KRTAP23-1A1A580 65 aa2.68□□□□□ -1.98
SCARNA6-201ENST00000515982 LCE3AQ5TA76 89 aa2.67□□□□□ -1.98
SCARNA6-201ENST00000515982 SPRR2DP22532 72 aa2.66□□□□□ -1.98
SCARNA6-201ENST00000515982 PP632Q6XCG6 107 aa2.64□□□□□ -1.99
SCARNA6-201ENST00000515982 KRTAP19-5Q3LI72 72 aa2.62□□□□□ -1.99
SCARNA6-201ENST00000515982 KRTAP19-7Q3SYF9 63 aa2.62□□□□□ -1.99
SCARNA6-201ENST00000515982 LCE3BQ5TA77 95 aa2.62□□□□□ -1.99
SCARNA6-201ENST00000515982 MT1EP04732 61 aa2.59□□□□□ -1.99
SCARNA6-201ENST00000515982 KRTAP12-3P60328 96 aa2.59□□□□□ -1.99
SCARNA6-201ENST00000515982 DSTQ03001 7570 aaKnown RBP2.55□□□□□ -2
SCARNA6-201ENST00000515982 MT1GP13640 62 aa2.54□□□□□ -2
SCARNA6-201ENST00000515982 KRTAP19-3Q7Z4W3 81 aa2.54□□□□□ -2
SCARNA6-201ENST00000515982 KRTAP4-9Q9BYQ8 210 aa2.54□□□□□ -2
SCARNA6-201ENST00000515982 KRTAP19-4Q3LI73 84 aa2.53□□□□□ -2
SCARNA6-201ENST00000515982 KRTAP15-1Q3LI76 137 aa2.51□□□□□ -2.01
SCARNA6-201ENST00000515982 LCE5AQ5TCM9 118 aa2.51□□□□□ -2.01
SCARNA6-201ENST00000515982 MT1LQ93083 61 aa2.51□□□□□ -2.01
SCARNA6-201ENST00000515982 A0A0A0MQY5 61 aa2.5□□□□□ -2.01
SCARNA6-201ENST00000515982 MT1MQ8N339 61 aa2.46□□□□□ -2.02
SCARNA6-201ENST00000515982 LCE1DQ5T752 114 aa2.44□□□□□ -2.02
SCARNA6-201ENST00000515982 NDUFAF8A1L188 74 aa2.43□□□□□ -2.02
SCARNA6-201ENST00000515982 KRTAP5-10Q6L8G5 202 aa2.43□□□□□ -2.02
SCARNA6-201ENST00000515982 HMCN1Q96RW7 5635 aa2.41□□□□□ -2.02
SCARNA6-201ENST00000515982 LCE3CQ5T5A8 94 aa2.41□□□□□ -2.02
SCARNA6-201ENST00000515982 AHNAK2Q8IVF2 5795 aa2.4□□□□□ -2.03
SCARNA6-201ENST00000515982 LUZP6Q538Z0 58 aa2.38□□□□□ -2.03
SCARNA6-201ENST00000515982 KRTAP5-7Q6L8G8 165 aa2.38□□□□□ -2.03
SCARNA6-201ENST00000515982 KRTAP4-7Q9BYR0 210 aa2.38□□□□□ -2.03
SCARNA6-201ENST00000515982 MT4P47944 62 aa2.36□□□□□ -2.03
SCARNA6-201ENST00000515982 KRTAP4-3Q9BYR4 195 aa2.36□□□□□ -2.03
SCARNA6-201ENST00000515982 LCE4AQ5TA78 99 aa2.33□□□□□ -2.04
SCARNA6-201ENST00000515982 SPRR5A0A1B0GTR4 108 aa2.3□□□□□ -2.04
SCARNA6-201ENST00000515982 KRTAP5-3Q6L8H2 238 aa2.3□□□□□ -2.04
SCARNA6-201ENST00000515982 KRTAP4-6Q9BYQ5 205 aa2.28□□□□□ -2.04
SCARNA6-201ENST00000515982 KRTAP5-4Q6L8H1 288 aa2.25□□□□□ -2.05
SCARNA6-201ENST00000515982 LOC100996750A0A140TA64 210 aa2.24□□□□□ -2.05
SCARNA6-201ENST00000515982 KRTAP9-6A8MVA2 160 aa2.22□□□□□ -2.05
SCARNA6-201ENST00000515982 KRTAP5-5Q701N2 237 aaPredicted RBP2.22□□□□□ -2.05
SCARNA6-201ENST00000515982 MT1AP04731 61 aa2.16□□□□□ -2.06
SCARNA6-201ENST00000515982 KRTAP12-4P60329 112 aa2.16□□□□□ -2.06
SCARNA6-201ENST00000515982 SYNE1Q8NF91 8797 aaKnown RBP2.15□□□□□ -2.07
SCARNA6-201ENST00000515982 KRTAP20-2Q3LI61 65 aa2.14□□□□□ -2.07
SCARNA6-201ENST00000515982 KRTAP6-1Q3LI64 71 aa2.11□□□□□ -2.07
SCARNA6-201ENST00000515982 INE1O15225 51 aa2.08□□□□□ -2.08
SCARNA6-201ENST00000515982 KRTAP9-4Q9BYQ2 154 aa2.08□□□□□ -2.08
SCARNA6-201ENST00000515982 AHNAKQ09666 5890 aaKnown RBP2.08□□□□□ -2.08
SCARNA6-201ENST00000515982 MUC5ACP98088 5654 aa2.07□□□□□ -2.08
SCARNA6-201ENST00000515982 KRTAP4-11Q9BYQ6 195 aa2.04□□□□□ -2.08
SCARNA6-201ENST00000515982 MUC5BQ9HC84 5762 aaPredicted RBP2.03□□□□□ -2.08
SCARNA6-201ENST00000515982 KRTAP5-8O75690 187 aa2□□□□□ -2.09
SCARNA6-201ENST00000515982 MT3P25713 68 aa1.98□□□□□ -2.09
SCARNA6-201ENST00000515982 KRTAP6-2Q3LI66 62 aa1.98□□□□□ -2.09
SCARNA6-201ENST00000515982 KRTAP5-2Q701N4 177 aa1.98□□□□□ -2.09
SCARNA6-201ENST00000515982 KRTAP9-9Q9BYP9 154 aa1.92□□□□□ -2.1
SCARNA6-201ENST00000515982 OBSCNQ5VST9 7968 aa1.89□□□□□ -2.11
SCARNA6-201ENST00000515982 KRTAP4-12Q9BQ66 201 aa1.83□□□□□ -2.12
SCARNA6-201ENST00000515982 LCE3DQ9BYE3 92 aa1.79□□□□□ -2.12
SCARNA6-201ENST00000515982 KRTAP5-1Q6L8H4 278 aa1.78□□□□□ -2.12
SCARNA6-201ENST00000515982 LCE1EQ5T753 118 aa1.77□□□□□ -2.13
SCARNA6-201ENST00000515982 LCE3EQ5T5B0 92 aa1.73□□□□□ -2.13
SCARNA6-201ENST00000515982 LCE1CQ5T751 118 aa1.64□□□□□ -2.15
SCARNA6-201ENST00000515982 LCE1BQ5T7P3 118 aa1.64□□□□□ -2.15
SCARNA6-201ENST00000515982 KRTAP4-2Q9BYR5 136 aa1.61□□□□□ -2.15
SCARNA6-201ENST00000515982 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.51□□□□□ -2.17
SCARNA6-201ENST00000515982 KRTAP5-11Q6L8G4 156 aa1.45□□□□□ -2.18
SCARNA6-201ENST00000515982 PHGR1C9JFL3 82 aa1.42□□□□□ -2.18
SCARNA6-201ENST00000515982 PRM1P04553 51 aa1.4□□□□□ -2.19
SCARNA6-201ENST00000515982 KRTAP21-2Q3LI59 83 aa1.39□□□□□ -2.19
SCARNA6-201ENST00000515982 LCE1FQ5T754 118 aa1.39□□□□□ -2.19
SCARNA6-201ENST00000515982 KRTAP4-4Q9BYR3 166 aa1.23□□□□□ -2.21
SCARNA6-201ENST00000515982 MUC19Q7Z5P9 8384 aa1.18□□□□□ -2.22
SCARNA6-201ENST00000515982 KRTAP21-1Q3LI58 79 aa1.08□□□□□ -2.24
SCARNA6-201ENST00000515982 MUC16Q8WXI7 14507 aa0.87□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 11.9 ms