RNA–Protein interactions for RNA: ENST00000515833.2

MATR3-226, Transcript of matrin 3, humanhuman

TSL 5

Gene MATR3, Length 1,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-226ENST00000515833 NIPBLQ6KC79 2804 aaeCLIP0.17□□□□□ -2.38
MATR3-226ENST00000515833 MUC12Q9UKN1 5478 aa0.16□□□□□ -2.38
MATR3-226ENST00000515833 LRBAP50851 2863 aa0.16□□□□□ -2.38
MATR3-226ENST00000515833 SPRR2GQ9BYE4 73 aa0.15□□□□□ -2.39
MATR3-226ENST00000515833 RPL39P5Q59GN2 51 aa0.14□□□□□ -2.39
MATR3-226ENST00000515833 USH2AO75445 5202 aa0.14□□□□□ -2.39
MATR3-226ENST00000515833 MYO9AB2RTY4 2548 aa0.13□□□□□ -2.39
MATR3-226ENST00000515833 CEP295Q9C0D2 2601 aa0.13□□□□□ -2.39
MATR3-226ENST00000515833 TLN1Q9Y490 2541 aaKnown RBP0.11□□□□□ -2.39
MATR3-226ENST00000515833 MT1LQ93083 61 aa0.11□□□□□ -2.39
MATR3-226ENST00000515833 PRUNE2Q8WUY3 3088 aa0.11□□□□□ -2.39
MATR3-226ENST00000515833 FRYLO94915 3013 aa0.11□□□□□ -2.39
MATR3-226ENST00000515833 VPS13CQ709C8 3753 aa0.09□□□□□ -2.39
MATR3-226ENST00000515833 A0A096LNI7 61 aa0.09□□□□□ -2.4
MATR3-226ENST00000515833 LAMA2P24043 3122 aaKnown RBP0.09□□□□□ -2.4
MATR3-226ENST00000515833 DNHD1Q96M86 4753 aa0.08□□□□□ -2.4
MATR3-226ENST00000515833 RPS29P62273 56 aaKnown RBP0.08□□□□□ -2.4
MATR3-226ENST00000515833 DMDP11532 3685 aa0.08□□□□□ -2.4
MATR3-226ENST00000515833 SRCAPQ6ZRS2 3230 aa0.08□□□□□ -2.4
MATR3-226ENST00000515833 CSMD2Q7Z408 3487 aa0.07□□□□□ -2.4
MATR3-226ENST00000515833 HERC2O95714 4834 aa0.06□□□□□ -2.4
MATR3-226ENST00000515833 DNAH12Q6ZR08 3092 aa0.06□□□□□ -2.4
MATR3-226ENST00000515833 DEFB108AA8MXU0 73 aa0.05□□□□□ -2.4
MATR3-226ENST00000515833 DEFB133Q30KQ1 61 aa0.05□□□□□ -2.4
MATR3-226ENST00000515833 BIRC6Q9NR09 4857 aa0.05□□□□□ -2.4
MATR3-226ENST00000515833 MT1XP80297 61 aa0.04□□□□□ -2.4
MATR3-226ENST00000515833 KRTAP19-7Q3SYF9 63 aa0.04□□□□□ -2.4
MATR3-226ENST00000515833 SZT2Q5T011 3432 aa0.04□□□□□ -2.4
MATR3-226ENST00000515833 UNC80Q8N2C7 3258 aa0.04□□□□□ -2.4
MATR3-226ENST00000515833 BOD1L1Q8NFC6 3051 aa0.03□□□□□ -2.4
MATR3-226ENST00000515833 HTN1P15515 57 aa0.02□□□□□ -2.41
MATR3-226ENST00000515833 KRTAP6-1Q3LI64 71 aa0.02□□□□□ -2.41
MATR3-226ENST00000515833 MUC3AQ02505 3323 aa0.02□□□□□ -2.41
MATR3-226ENST00000515833 DCHS1Q96JQ0 3298 aa0.02□□□□□ -2.41
MATR3-226ENST00000515833 FREM2Q5SZK8 3169 aa0□□□□□ -2.41
MATR3-226ENST00000515833 SPEGQ15772 3267 aa-0.01□□□□□ -2.41
MATR3-226ENST00000515833 MKI67P46013 3256 aaKnown RBP-0.01□□□□□ -2.41
MATR3-226ENST00000515833 XIRP2A4UGR9 3374 aa-0.02□□□□□ -2.41
MATR3-226ENST00000515833 EP400Q96L91 3159 aa-0.02□□□□□ -2.41
MATR3-226ENST00000515833 KRTAP19-8Q3LI54 63 aa-0.02□□□□□ -2.41
MATR3-226ENST00000515833 CENPEQ02224 2701 aa-0.02□□□□□ -2.41
MATR3-226ENST00000515833 EYSQ5T1H1 3165 aa-0.03□□□□□ -2.41
MATR3-226ENST00000515833 CFAP47Q6ZTR5 3102 aa-0.04□□□□□ -2.42
MATR3-226ENST00000515833 PCNTO95613 3336 aa-0.05□□□□□ -2.42
MATR3-226ENST00000515833 CEP350Q5VT06 3117 aa-0.06□□□□□ -2.42
MATR3-226ENST00000515833 DEFB4AO15263 64 aa-0.06□□□□□ -2.42
MATR3-226ENST00000515833 MT4P47944 62 aa-0.07□□□□□ -2.42
MATR3-226ENST00000515833 KRTAP19-6Q3LI70 58 aa-0.07□□□□□ -2.42
MATR3-226ENST00000515833 LOC400499M0QZD8 3231 aa-0.07□□□□□ -2.42
MATR3-226ENST00000515833 MYO15AQ9UKN7 3530 aa-0.08□□□□□ -2.42
MATR3-226ENST00000515833 CD52P31358 61 aa-0.08□□□□□ -2.42
MATR3-226ENST00000515833 APELAP0DMC3 54 aa-0.09□□□□□ -2.42
MATR3-226ENST00000515833 LINC01556Q5JQF7 62 aa-0.12□□□□□ -2.43
MATR3-226ENST00000515833 KRTAP20-2Q3LI61 65 aa-0.13□□□□□ -2.43
MATR3-226ENST00000515833 MT1HL1P0DM35 61 aa-0.15□□□□□ -2.43
MATR3-226ENST00000515833 VCANP13611 3396 aa-0.15□□□□□ -2.43
MATR3-226ENST00000515833 MT1MQ8N339 61 aa-0.17□□□□□ -2.44
MATR3-226ENST00000515833 Q9Y3F1 56 aa-0.17□□□□□ -2.44
MATR3-226ENST00000515833 MT2AP02795 61 aa-0.18□□□□□ -2.44
MATR3-226ENST00000515833 CENPFP49454 3210 aa-0.18□□□□□ -2.44
MATR3-226ENST00000515833 MT1GP13640 62 aa-0.19□□□□□ -2.44
MATR3-226ENST00000515833 VPS13AQ96RL7 3174 aa-0.2□□□□□ -2.44
MATR3-226ENST00000515833 A0A096LPF7 62 aa-0.23□□□□□ -2.45
MATR3-226ENST00000515833 BRCA2P51587 3418 aa-0.23□□□□□ -2.45
MATR3-226ENST00000515833 USP34Q70CQ2 3546 aa-0.24□□□□□ -2.45
MATR3-226ENST00000515833 WDFY3Q8IZQ1 3526 aa-0.25□□□□□ -2.45
MATR3-226ENST00000515833 MT1BP07438 61 aa-0.26□□□□□ -2.45
MATR3-226ENST00000515833 UTRNP46939 3433 aa-0.26□□□□□ -2.45
MATR3-226ENST00000515833 CDH23Q9H251 3354 aa-0.28□□□□□ -2.45
MATR3-226ENST00000515833 ASPMQ8IZT6 3477 aa-0.3□□□□□ -2.46
MATR3-226ENST00000515833 MT1FP04733 61 aa-0.33□□□□□ -2.46
MATR3-226ENST00000515833 GOLGB1Q14789 3259 aaKnown RBP-0.35□□□□□ -2.46
MATR3-226ENST00000515833 DNAH14Q0VDD8 3507 aa-0.38□□□□□ -2.47
MATR3-226ENST00000515833 DEFB108BQ8NET1 73 aa-0.39□□□□□ -2.47
MATR3-226ENST00000515833 COX14Q96I36 57 aa-0.44□□□□□ -2.48
MATR3-226ENST00000515833 STATHP02808 62 aa-0.47□□□□□ -2.48
MATR3-226ENST00000515833 HTN3P15516 51 aa-0.51□□□□□ -2.49
MATR3-226ENST00000515833 KRTAP19-2Q3LHN2 52 aa-0.53□□□□□ -2.49
Retrieved 78 of 20,778 RNA–protein pairs in 94 ms