RNA–Protein interactions for RNA: ENST00000515636.1

NEK11-216, Transcript of NIMA related kinase 11, humanhuman

TSL 2

Gene NEK11, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK11-216ENST00000515636 LINC01558Q9Y6Z2 57 aa4.32□□□□□ -1.72
NEK11-216ENST00000515636 KRTAP19-7Q3SYF9 63 aa4.3□□□□□ -1.72
NEK11-216ENST00000515636 A8MU10 97 aa4.28□□□□□ -1.72
NEK11-216ENST00000515636 PRR15LQ9BU68 103 aa4.28□□□□□ -1.72
NEK11-216ENST00000515636 MT1EP04732 61 aa4.26□□□□□ -1.73
NEK11-216ENST00000515636 LCE5AQ5TCM9 118 aa4.23□□□□□ -1.73
NEK11-216ENST00000515636 KRTAP19-3Q7Z4W3 81 aa4.22□□□□□ -1.73
NEK11-216ENST00000515636 CDC42SE1Q9NRR8 79 aa4.22□□□□□ -1.73
NEK11-216ENST00000515636 A6NED7 52 aa4.21□□□□□ -1.74
NEK11-216ENST00000515636 KRTAP4-9Q9BYQ8 210 aa4.21□□□□□ -1.74
NEK11-216ENST00000515636 KRTAP4-2Q9BYR5 136 aa4.21□□□□□ -1.74
NEK11-216ENST00000515636 PMAIP1Q13794 54 aa4.18□□□□□ -1.74
NEK11-216ENST00000515636 KRTAP19-5Q3LI72 72 aa4.18□□□□□ -1.74
NEK11-216ENST00000515636 C10orf95Q9H7T3 257 aa4.16□□□□□ -1.74
NEK11-216ENST00000515636 TNP1P09430 55 aa4.13□□□□□ -1.75
NEK11-216ENST00000515636 DSTQ03001 7570 aaKnown RBP4.12□□□□□ -1.75
NEK11-216ENST00000515636 LCE3AQ5TA76 89 aa4.11□□□□□ -1.75
NEK11-216ENST00000515636 UQCR11O14957 56 aa4.1□□□□□ -1.75
NEK11-216ENST00000515636 MT1GP13640 62 aa4.1□□□□□ -1.75
NEK11-216ENST00000515636 KTN1-AS1Q86SY8 53 aa4.09□□□□□ -1.75
NEK11-216ENST00000515636 KRTAP23-1A1A580 65 aa4.08□□□□□ -1.76
NEK11-216ENST00000515636 MT1LQ93083 61 aa4.08□□□□□ -1.76
NEK11-216ENST00000515636 KRTAP4-11Q9BYQ6 195 aa4.08□□□□□ -1.76
NEK11-216ENST00000515636 PP632Q6XCG6 107 aa4.07□□□□□ -1.76
NEK11-216ENST00000515636 MIR22HGQ0VDD5 57 aa4.05□□□□□ -1.76
NEK11-216ENST00000515636 MT1MQ8N339 61 aa4.05□□□□□ -1.76
NEK11-216ENST00000515636 KRTAP5-3Q6L8H2 238 aa3.98□□□□□ -1.77
NEK11-216ENST00000515636 KRTAP12-3P60328 96 aa3.95□□□□□ -1.78
NEK11-216ENST00000515636 KRTAP4-3Q9BYR4 195 aa3.94□□□□□ -1.78
NEK11-216ENST00000515636 KRTAP25-1Q3LHN0 102 aa3.92□□□□□ -1.78
NEK11-216ENST00000515636 K7ERS5 55 aa3.91□□□□□ -1.78
NEK11-216ENST00000515636 MT4P47944 62 aa3.85□□□□□ -1.79
NEK11-216ENST00000515636 KRTAP5-4Q6L8H1 288 aa3.85□□□□□ -1.79
NEK11-216ENST00000515636 KRTAP15-1Q3LI76 137 aa3.82□□□□□ -1.8
NEK11-216ENST00000515636 PRAC1Q96KF2 57 aa3.8□□□□□ -1.8
NEK11-216ENST00000515636 GPR98Q8WXG9 6306 aa3.79□□□□□ -1.8
NEK11-216ENST00000515636 HMCN1Q96RW7 5635 aa3.75□□□□□ -1.81
NEK11-216ENST00000515636 KRTAP5-5Q701N2 237 aaPredicted RBP3.73□□□□□ -1.81
NEK11-216ENST00000515636 ROMO1P60602 79 aa3.71□□□□□ -1.82
NEK11-216ENST00000515636 LCE3CQ5T5A8 94 aa3.64□□□□□ -1.83
NEK11-216ENST00000515636 KRTAP20-2Q3LI61 65 aa3.63□□□□□ -1.83
NEK11-216ENST00000515636 KRTAP5-10Q6L8G5 202 aa3.61□□□□□ -1.83
NEK11-216ENST00000515636 SPRR5A0A1B0GTR4 108 aa3.6□□□□□ -1.83
NEK11-216ENST00000515636 KRTAP12-4P60329 112 aa3.58□□□□□ -1.84
NEK11-216ENST00000515636 AHNAK2Q8IVF2 5795 aa3.58□□□□□ -1.84
NEK11-216ENST00000515636 SYNE1Q8NF91 8797 aaKnown RBP3.58□□□□□ -1.84
NEK11-216ENST00000515636 MT1AP04731 61 aa3.47□□□□□ -1.85
NEK11-216ENST00000515636 KRTAP5-7Q6L8G8 165 aa3.46□□□□□ -1.86
NEK11-216ENST00000515636 KRTAP9-6A8MVA2 160 aa3.45□□□□□ -1.86
NEK11-216ENST00000515636 KRTAP6-1Q3LI64 71 aa3.44□□□□□ -1.86
NEK11-216ENST00000515636 KRTAP5-2Q701N4 177 aa3.39□□□□□ -1.87
NEK11-216ENST00000515636 KRTAP6-2Q3LI66 62 aa3.28□□□□□ -1.88
NEK11-216ENST00000515636 NDUFAF8A1L188 74 aa3.2□□□□□ -1.9
NEK11-216ENST00000515636 KRTAP5-8O75690 187 aa3.19□□□□□ -1.9
NEK11-216ENST00000515636 OBSCNQ5VST9 7968 aa3.17□□□□□ -1.9
NEK11-216ENST00000515636 MT3P25713 68 aa3.15□□□□□ -1.91
NEK11-216ENST00000515636 A0A0A0MQY5 61 aa3.13□□□□□ -1.91
NEK11-216ENST00000515636 LUZP6Q538Z0 58 aa3.13□□□□□ -1.91
NEK11-216ENST00000515636 KRTAP5-1Q6L8H4 278 aa3.02□□□□□ -1.93
NEK11-216ENST00000515636 MUC5ACP98088 5654 aa2.96□□□□□ -1.94
NEK11-216ENST00000515636 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.91□□□□□ -1.94
NEK11-216ENST00000515636 LCE1EQ5T753 118 aa2.9□□□□□ -1.95
NEK11-216ENST00000515636 MUC5BQ9HC84 5762 aaPredicted RBP2.9□□□□□ -1.95
NEK11-216ENST00000515636 AHNAKQ09666 5890 aaKnown RBP2.87□□□□□ -1.95
NEK11-216ENST00000515636 INE1O15225 51 aa2.74□□□□□ -1.97
NEK11-216ENST00000515636 KRTAP5-11Q6L8G4 156 aa2.72□□□□□ -1.97
NEK11-216ENST00000515636 LCE1BQ5T7P3 118 aa2.71□□□□□ -1.98
NEK11-216ENST00000515636 LCE1CQ5T751 118 aa2.69□□□□□ -1.98
NEK11-216ENST00000515636 LCE1FQ5T754 118 aa2.62□□□□□ -1.99
NEK11-216ENST00000515636 LCE3DQ9BYE3 92 aa2.62□□□□□ -1.99
NEK11-216ENST00000515636 LCE3EQ5T5B0 92 aa2.47□□□□□ -2.01
NEK11-216ENST00000515636 KRTAP4-4Q9BYR3 166 aa2.44□□□□□ -2.02
NEK11-216ENST00000515636 KRTAP21-2Q3LI59 83 aa2.27□□□□□ -2.05
NEK11-216ENST00000515636 PHGR1C9JFL3 82 aa2.11□□□□□ -2.07
NEK11-216ENST00000515636 MUC19Q7Z5P9 8384 aa1.97□□□□□ -2.09
NEK11-216ENST00000515636 PRM1P04553 51 aa1.92□□□□□ -2.1
NEK11-216ENST00000515636 KRTAP21-1Q3LI58 79 aa1.58□□□□□ -2.16
NEK11-216ENST00000515636 MUC16Q8WXI7 14507 aa1.34□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 74.8 ms