RNA–Protein interactions for RNA: ENST00000515588.1

SERF1B-208, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 2 BASIC

Gene SERF1B, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-208ENST00000515588 PRR15LQ9BU68 103 aa5.87□□□□□ -1.47
SERF1B-208ENST00000515588 KRTAP19-5Q3LI72 72 aa5.8□□□□□ -1.48
SERF1B-208ENST00000515588 C10orf95Q9H7T3 257 aa5.8□□□□□ -1.48
SERF1B-208ENST00000515588 KRTAP19-3Q7Z4W3 81 aa5.79□□□□□ -1.48
SERF1B-208ENST00000515588 TNP1P09430 55 aa5.71□□□□□ -1.5
SERF1B-208ENST00000515588 UQCR11O14957 56 aa5.7□□□□□ -1.5
SERF1B-208ENST00000515588 LCE3AQ5TA76 89 aa5.7□□□□□ -1.5
SERF1B-208ENST00000515588 MT1GP13640 62 aa5.65□□□□□ -1.5
SERF1B-208ENST00000515588 MT1LQ93083 61 aa5.62□□□□□ -1.51
SERF1B-208ENST00000515588 MIR22HGQ0VDD5 57 aa5.59□□□□□ -1.51
SERF1B-208ENST00000515588 DSTQ03001 7570 aaKnown RBP5.58□□□□□ -1.52
SERF1B-208ENST00000515588 MT1MQ8N339 61 aa5.57□□□□□ -1.52
SERF1B-208ENST00000515588 PP632Q6XCG6 107 aa5.56□□□□□ -1.52
SERF1B-208ENST00000515588 PSPHP1O15172 72 aa5.55□□□□□ -1.52
SERF1B-208ENST00000515588 Q1T7F1 81 aa5.53□□□□□ -1.52
SERF1B-208ENST00000515588 V9GYY9 64 aa5.53□□□□□ -1.52
SERF1B-208ENST00000515588 KRTAP12-3P60328 96 aa5.47□□□□□ -1.53
SERF1B-208ENST00000515588 KRTAP4-3Q9BYR4 195 aa5.47□□□□□ -1.53
SERF1B-208ENST00000515588 KRTAP25-1Q3LHN0 102 aa5.43□□□□□ -1.54
SERF1B-208ENST00000515588 K7ERS5 55 aa5.42□□□□□ -1.54
SERF1B-208ENST00000515588 PCP4P48539 62 aa5.39□□□□□ -1.55
SERF1B-208ENST00000515588 A6NED7 52 aa5.33□□□□□ -1.56
SERF1B-208ENST00000515588 RPS28P62857 69 aaKnown RBP5.3□□□□□ -1.56
SERF1B-208ENST00000515588 KRTAP5-4Q6L8H1 288 aa5.28□□□□□ -1.56
SERF1B-208ENST00000515588 MT4P47944 62 aa5.27□□□□□ -1.57
SERF1B-208ENST00000515588 HMCN1Q96RW7 5635 aa5.25□□□□□ -1.57
SERF1B-208ENST00000515588 KRTAP23-1A1A580 65 aa5.23□□□□□ -1.57
SERF1B-208ENST00000515588 CDC42SE1Q9NRR8 79 aa5.18□□□□□ -1.58
SERF1B-208ENST00000515588 GPR98Q8WXG9 6306 aa5.17□□□□□ -1.58
SERF1B-208ENST00000515588 KRTAP15-1Q3LI76 137 aa5.13□□□□□ -1.59
SERF1B-208ENST00000515588 ROMO1P60602 79 aa5.12□□□□□ -1.59
SERF1B-208ENST00000515588 KRTAP5-5Q701N2 237 aaPredicted RBP5.12□□□□□ -1.59
SERF1B-208ENST00000515588 LCE3CQ5T5A8 94 aa5.05□□□□□ -1.6
SERF1B-208ENST00000515588 AHNAK2Q8IVF2 5795 aa5□□□□□ -1.61
SERF1B-208ENST00000515588 KRTAP20-2Q3LI61 65 aa4.97□□□□□ -1.61
SERF1B-208ENST00000515588 SPRR5A0A1B0GTR4 108 aa4.93□□□□□ -1.62
SERF1B-208ENST00000515588 KRTAP5-10Q6L8G5 202 aa4.92□□□□□ -1.62
SERF1B-208ENST00000515588 KRTAP12-4P60329 112 aa4.91□□□□□ -1.62
SERF1B-208ENST00000515588 SYNE1Q8NF91 8797 aaKnown RBP4.91□□□□□ -1.62
SERF1B-208ENST00000515588 KRTAP9-6A8MVA2 160 aa4.81□□□□□ -1.64
SERF1B-208ENST00000515588 MT1AP04731 61 aa4.77□□□□□ -1.65
SERF1B-208ENST00000515588 KRTAP6-1Q3LI64 71 aa4.76□□□□□ -1.65
SERF1B-208ENST00000515588 BRK1Q8WUW1 75 aa4.71□□□□□ -1.66
SERF1B-208ENST00000515588 KRTAP5-7Q6L8G8 165 aa4.69□□□□□ -1.66
SERF1B-208ENST00000515588 KRTAP5-2Q701N4 177 aa4.64□□□□□ -1.67
SERF1B-208ENST00000515588 SVIPQ8NHG7 77 aa4.56□□□□□ -1.68
SERF1B-208ENST00000515588 KRTAP6-2Q3LI66 62 aa4.52□□□□□ -1.69
SERF1B-208ENST00000515588 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.41□□□□□ -1.7
SERF1B-208ENST00000515588 PMAIP1Q13794 54 aa4.4□□□□□ -1.71
SERF1B-208ENST00000515588 KRTAP5-8O75690 187 aa4.37□□□□□ -1.71
SERF1B-208ENST00000515588 KRTAP5-11Q6L8G4 156 aa4.35□□□□□ -1.71
SERF1B-208ENST00000515588 MT3P25713 68 aa4.34□□□□□ -1.71
SERF1B-208ENST00000515588 PRAC1Q96KF2 57 aa4.3□□□□□ -1.72
SERF1B-208ENST00000515588 OBSCNQ5VST9 7968 aa4.25□□□□□ -1.73
SERF1B-208ENST00000515588 PRO0628Q9UI54 55 aa4.18□□□□□ -1.74
SERF1B-208ENST00000515588 KRTAP5-1Q6L8H4 278 aa4.15□□□□□ -1.75
SERF1B-208ENST00000515588 MUC5BQ9HC84 5762 aaPredicted RBP4.11□□□□□ -1.75
SERF1B-208ENST00000515588 LCE1EQ5T753 118 aa4.07□□□□□ -1.76
SERF1B-208ENST00000515588 MUC5ACP98088 5654 aa4.07□□□□□ -1.76
SERF1B-208ENST00000515588 AHNAKQ09666 5890 aaKnown RBP4.05□□□□□ -1.76
SERF1B-208ENST00000515588 KTN1-AS1Q86SY8 53 aa3.97□□□□□ -1.77
SERF1B-208ENST00000515588 LCE1BQ5T7P3 118 aa3.74□□□□□ -1.81
SERF1B-208ENST00000515588 LCE1CQ5T751 118 aa3.7□□□□□ -1.82
SERF1B-208ENST00000515588 KRTAP4-4Q9BYR3 166 aa3.7□□□□□ -1.82
SERF1B-208ENST00000515588 LCE3DQ9BYE3 92 aa3.64□□□□□ -1.83
SERF1B-208ENST00000515588 LUZP6Q538Z0 58 aa3.5□□□□□ -1.85
SERF1B-208ENST00000515588 LCE3EQ5T5B0 92 aa3.43□□□□□ -1.86
SERF1B-208ENST00000515588 LCE1FQ5T754 118 aa3.33□□□□□ -1.88
SERF1B-208ENST00000515588 KRTAP21-2Q3LI59 83 aa3.14□□□□□ -1.91
SERF1B-208ENST00000515588 NDUFAF8A1L188 74 aa3□□□□□ -1.93
SERF1B-208ENST00000515588 PHGR1C9JFL3 82 aa2.89□□□□□ -1.95
SERF1B-208ENST00000515588 A0A0A0MQY5 61 aa2.75□□□□□ -1.97
SERF1B-208ENST00000515588 PRM1P04553 51 aa2.64□□□□□ -1.99
SERF1B-208ENST00000515588 MUC19Q7Z5P9 8384 aa2.62□□□□□ -1.99
SERF1B-208ENST00000515588 INE1O15225 51 aa2.53□□□□□ -2
SERF1B-208ENST00000515588 KRTAP21-1Q3LI58 79 aa2.14□□□□□ -2.07
SERF1B-208ENST00000515588 MUC16Q8WXI7 14507 aa1.91□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 171.2 ms