RNA–Protein interactions for RNA: ENST00000515587.1

PDCD6-211, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 855 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-211ENST00000515587 TNP1P09430 55 aa5.85□□□□□ -1.47
PDCD6-211ENST00000515587 KRTAP4-12Q9BQ66 201 aa5.84□□□□□ -1.47
PDCD6-211ENST00000515587 CDC42SE1Q9NRR8 79 aa5.83□□□□□ -1.48
PDCD6-211ENST00000515587 LCE3BQ5TA77 95 aa5.8□□□□□ -1.48
PDCD6-211ENST00000515587 KRTAP25-1Q3LHN0 102 aa5.7□□□□□ -1.5
PDCD6-211ENST00000515587 DSTQ03001 7570 aaKnown RBP5.69□□□□□ -1.5
PDCD6-211ENST00000515587 LCE3AQ5TA76 89 aa5.65□□□□□ -1.5
PDCD6-211ENST00000515587 KRTAP4-9Q9BYQ8 210 aa5.65□□□□□ -1.5
PDCD6-211ENST00000515587 KRTAP23-1A1A580 65 aa5.61□□□□□ -1.51
PDCD6-211ENST00000515587 ROMO1P60602 79 aa5.61□□□□□ -1.51
PDCD6-211ENST00000515587 KRTAP19-7Q3SYF9 63 aa5.61□□□□□ -1.51
PDCD6-211ENST00000515587 KRTAP19-5Q3LI72 72 aa5.6□□□□□ -1.51
PDCD6-211ENST00000515587 BRK1Q8WUW1 75 aa5.6□□□□□ -1.51
PDCD6-211ENST00000515587 MT1EP04732 61 aa5.56□□□□□ -1.52
PDCD6-211ENST00000515587 LCE4AQ5TA78 99 aa5.56□□□□□ -1.52
PDCD6-211ENST00000515587 KRTAP9-9Q9BYP9 154 aa5.5□□□□□ -1.53
PDCD6-211ENST00000515587 KRTAP9-4Q9BYQ2 154 aa5.5□□□□□ -1.53
PDCD6-211ENST00000515587 KRTAP12-3P60328 96 aa5.46□□□□□ -1.54
PDCD6-211ENST00000515587 KRTAP19-3Q7Z4W3 81 aa5.45□□□□□ -1.54
PDCD6-211ENST00000515587 PRO0628Q9UI54 55 aa5.45□□□□□ -1.54
PDCD6-211ENST00000515587 LCE5AQ5TCM9 118 aa5.4□□□□□ -1.54
PDCD6-211ENST00000515587 PP632Q6XCG6 107 aa5.4□□□□□ -1.54
PDCD6-211ENST00000515587 AHNAK2Q8IVF2 5795 aa5.4□□□□□ -1.55
PDCD6-211ENST00000515587 LCE1DQ5T752 114 aa5.39□□□□□ -1.55
PDCD6-211ENST00000515587 HMCN1Q96RW7 5635 aa5.38□□□□□ -1.55
PDCD6-211ENST00000515587 MT1GP13640 62 aa5.38□□□□□ -1.55
PDCD6-211ENST00000515587 KRTAP5-10Q6L8G5 202 aa5.38□□□□□ -1.55
PDCD6-211ENST00000515587 MT1LQ93083 61 aa5.38□□□□□ -1.55
PDCD6-211ENST00000515587 PMAIP1Q13794 54 aa5.28□□□□□ -1.56
PDCD6-211ENST00000515587 MT1MQ8N339 61 aa5.28□□□□□ -1.56
PDCD6-211ENST00000515587 MT4P47944 62 aa5.25□□□□□ -1.57
PDCD6-211ENST00000515587 KRTAP5-7Q6L8G8 165 aa5.25□□□□□ -1.57
PDCD6-211ENST00000515587 KRTAP15-1Q3LI76 137 aa5.22□□□□□ -1.57
PDCD6-211ENST00000515587 SPRR5A0A1B0GTR4 108 aa5.15□□□□□ -1.59
PDCD6-211ENST00000515587 KRTAP4-7Q9BYR0 210 aa5.12□□□□□ -1.59
PDCD6-211ENST00000515587 KRTAP4-3Q9BYR4 195 aa5.11□□□□□ -1.59
PDCD6-211ENST00000515587 KRTAP5-3Q6L8H2 238 aa5.08□□□□□ -1.6
PDCD6-211ENST00000515587 LCE3CQ5T5A8 94 aa5.06□□□□□ -1.6
PDCD6-211ENST00000515587 KTN1-AS1Q86SY8 53 aa4.99□□□□□ -1.61
PDCD6-211ENST00000515587 KRTAP4-11Q9BYQ6 195 aa4.97□□□□□ -1.61
PDCD6-211ENST00000515587 PRAC1Q96KF2 57 aa4.95□□□□□ -1.62
PDCD6-211ENST00000515587 KRTAP5-4Q6L8H1 288 aa4.93□□□□□ -1.62
PDCD6-211ENST00000515587 KRTAP4-2Q9BYR5 136 aa4.89□□□□□ -1.63
PDCD6-211ENST00000515587 A0A0A0MQY5 61 aa4.77□□□□□ -1.65
PDCD6-211ENST00000515587 KRTAP5-5Q701N2 237 aaPredicted RBP4.77□□□□□ -1.65
PDCD6-211ENST00000515587 KRTAP20-2Q3LI61 65 aa4.72□□□□□ -1.65
PDCD6-211ENST00000515587 KRTAP9-6A8MVA2 160 aa4.7□□□□□ -1.66
PDCD6-211ENST00000515587 AHNAKQ09666 5890 aaKnown RBP4.66□□□□□ -1.66
PDCD6-211ENST00000515587 KRTAP12-4P60329 112 aa4.64□□□□□ -1.67
PDCD6-211ENST00000515587 MUC5ACP98088 5654 aa4.59□□□□□ -1.67
PDCD6-211ENST00000515587 MT1AP04731 61 aa4.59□□□□□ -1.67
PDCD6-211ENST00000515587 MUC5BQ9HC84 5762 aaPredicted RBP4.53□□□□□ -1.68
PDCD6-211ENST00000515587 KRTAP6-1Q3LI64 71 aa4.52□□□□□ -1.69
PDCD6-211ENST00000515587 SYNE1Q8NF91 8797 aaKnown RBP4.51□□□□□ -1.69
PDCD6-211ENST00000515587 KRTAP5-8O75690 187 aa4.42□□□□□ -1.7
PDCD6-211ENST00000515587 KRTAP6-2Q3LI66 62 aa4.27□□□□□ -1.73
PDCD6-211ENST00000515587 KRTAP5-2Q701N4 177 aa4.26□□□□□ -1.73
PDCD6-211ENST00000515587 MT3P25713 68 aa4.21□□□□□ -1.74
PDCD6-211ENST00000515587 LUZP6Q538Z0 58 aa4.21□□□□□ -1.74
PDCD6-211ENST00000515587 OBSCNQ5VST9 7968 aa4.14□□□□□ -1.75
PDCD6-211ENST00000515587 NDUFAF8A1L188 74 aa3.97□□□□□ -1.77
PDCD6-211ENST00000515587 KRTAP5-1Q6L8H4 278 aa3.91□□□□□ -1.78
PDCD6-211ENST00000515587 LCE1EQ5T753 118 aa3.76□□□□□ -1.81
PDCD6-211ENST00000515587 LCE3DQ9BYE3 92 aa3.74□□□□□ -1.81
PDCD6-211ENST00000515587 LCE1FQ5T754 118 aa3.65□□□□□ -1.83
PDCD6-211ENST00000515587 LCE3EQ5T5B0 92 aa3.57□□□□□ -1.84
PDCD6-211ENST00000515587 LCE1BQ5T7P3 118 aa3.53□□□□□ -1.84
PDCD6-211ENST00000515587 LCE1CQ5T751 118 aa3.49□□□□□ -1.85
PDCD6-211ENST00000515587 KRTAP5-11Q6L8G4 156 aa3.36□□□□□ -1.87
PDCD6-211ENST00000515587 INE1O15225 51 aa3.35□□□□□ -1.87
PDCD6-211ENST00000515587 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.2□□□□□ -1.9
PDCD6-211ENST00000515587 PHGR1C9JFL3 82 aa3.17□□□□□ -1.9
PDCD6-211ENST00000515587 KRTAP21-2Q3LI59 83 aa2.96□□□□□ -1.94
PDCD6-211ENST00000515587 PRM1P04553 51 aa2.87□□□□□ -1.95
PDCD6-211ENST00000515587 KRTAP4-4Q9BYR3 166 aa2.67□□□□□ -1.98
PDCD6-211ENST00000515587 MUC19Q7Z5P9 8384 aa2.62□□□□□ -1.99
PDCD6-211ENST00000515587 KRTAP21-1Q3LI58 79 aa2.38□□□□□ -2.03
PDCD6-211ENST00000515587 MUC16Q8WXI7 14507 aa1.81□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 80 ms