RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 KRTAP2-2Q9BYT5 123 aa9.39□□□□□ -0.91
DDR1-279ENST00000515529 KRTAP2-1Q9BYU5 128 aa9.39□□□□□ -0.91
DDR1-279ENST00000515529 LCE3BQ5TA77 95 aa9.38□□□□□ -0.91
DDR1-279ENST00000515529 CDC42SE1Q9NRR8 79 aa9.35□□□□□ -0.91
DDR1-279ENST00000515529 MT1GP13640 62 aa9.3□□□□□ -0.92
DDR1-279ENST00000515529 PP632Q6XCG6 107 aa9.29□□□□□ -0.92
DDR1-279ENST00000515529 MT1LQ93083 61 aa9.26□□□□□ -0.93
DDR1-279ENST00000515529 KRTAP12-3P60328 96 aa9.25□□□□□ -0.93
DDR1-279ENST00000515529 ROMO1P60602 79 aa9.17□□□□□ -0.94
DDR1-279ENST00000515529 MT1MQ8N339 61 aa9.13□□□□□ -0.95
DDR1-279ENST00000515529 KRTAP23-1A1A580 65 aa9.11□□□□□ -0.95
DDR1-279ENST00000515529 DSTQ03001 7570 aaKnown RBP9.05□□□□□ -0.96
DDR1-279ENST00000515529 KRTAP4-3Q9BYR4 195 aa8.88□□□□□ -0.99
DDR1-279ENST00000515529 BRK1Q8WUW1 75 aa8.82□□□□□ -1
DDR1-279ENST00000515529 KRTAP4-7Q9BYR0 210 aa8.8□□□□□ -1
DDR1-279ENST00000515529 KRTAP15-1Q3LI76 137 aa8.78□□□□□ -1
DDR1-279ENST00000515529 KRTAP19-4Q3LI73 84 aa8.76□□□□□ -1.01
DDR1-279ENST00000515529 KRTAP4-9Q9BYQ8 210 aa8.6□□□□□ -1.03
DDR1-279ENST00000515529 LCE4AQ5TA78 99 aa8.59□□□□□ -1.03
DDR1-279ENST00000515529 LCE3CQ5T5A8 94 aa8.54□□□□□ -1.04
DDR1-279ENST00000515529 LCE1DQ5T752 114 aa8.45□□□□□ -1.06
DDR1-279ENST00000515529 MT4P47944 62 aa8.44□□□□□ -1.06
DDR1-279ENST00000515529 KRTAP5-4Q6L8H1 288 aa8.43□□□□□ -1.06
DDR1-279ENST00000515529 LOC100996750A0A140TA64 210 aa8.32□□□□□ -1.08
DDR1-279ENST00000515529 PMAIP1Q13794 54 aa8.31□□□□□ -1.08
DDR1-279ENST00000515529 KRTAP5-5Q701N2 237 aaPredicted RBP8.28□□□□□ -1.08
DDR1-279ENST00000515529 GPR98Q8WXG9 6306 aa8.26□□□□□ -1.09
DDR1-279ENST00000515529 HMCN1Q96RW7 5635 aa8.26□□□□□ -1.09
DDR1-279ENST00000515529 KRTAP4-6Q9BYQ5 205 aa8.19□□□□□ -1.1
DDR1-279ENST00000515529 KRTAP12-4P60329 112 aa8.09□□□□□ -1.11
DDR1-279ENST00000515529 SPRR5A0A1B0GTR4 108 aa7.99□□□□□ -1.13
DDR1-279ENST00000515529 PRO0628Q9UI54 55 aa7.99□□□□□ -1.13
DDR1-279ENST00000515529 KRTAP9-6A8MVA2 160 aa7.97□□□□□ -1.13
DDR1-279ENST00000515529 KRTAP20-2Q3LI61 65 aa7.96□□□□□ -1.14
DDR1-279ENST00000515529 SYNE1Q8NF91 8797 aaKnown RBP7.92□□□□□ -1.14
DDR1-279ENST00000515529 MT1AP04731 61 aa7.9□□□□□ -1.14
DDR1-279ENST00000515529 PRAC1Q96KF2 57 aa7.87□□□□□ -1.15
DDR1-279ENST00000515529 AHNAK2Q8IVF2 5795 aa7.84□□□□□ -1.15
DDR1-279ENST00000515529 KRTAP6-1Q3LI64 71 aa7.81□□□□□ -1.16
DDR1-279ENST00000515529 KRTAP5-3Q6L8H2 238 aa7.68□□□□□ -1.18
DDR1-279ENST00000515529 KRTAP5-10Q6L8G5 202 aa7.67□□□□□ -1.18
DDR1-279ENST00000515529 KRTAP9-4Q9BYQ2 154 aa7.59□□□□□ -1.19
DDR1-279ENST00000515529 KTN1-AS1Q86SY8 53 aa7.57□□□□□ -1.2
DDR1-279ENST00000515529 KRTAP5-2Q701N4 177 aa7.46□□□□□ -1.22
DDR1-279ENST00000515529 KRTAP5-7Q6L8G8 165 aa7.44□□□□□ -1.22
DDR1-279ENST00000515529 KRTAP6-2Q3LI66 62 aa7.4□□□□□ -1.22
DDR1-279ENST00000515529 SVIPQ8NHG7 77 aa7.3□□□□□ -1.24
DDR1-279ENST00000515529 MT3P25713 68 aa7.24□□□□□ -1.25
DDR1-279ENST00000515529 KRTAP4-11Q9BYQ6 195 aa7.18□□□□□ -1.26
DDR1-279ENST00000515529 KRTAP5-8O75690 187 aa6.9□□□□□ -1.3
DDR1-279ENST00000515529 OBSCNQ5VST9 7968 aa6.87□□□□□ -1.31
DDR1-279ENST00000515529 LUZP6Q538Z0 58 aa6.7□□□□□ -1.34
DDR1-279ENST00000515529 KRTAP5-1Q6L8H4 278 aa6.61□□□□□ -1.35
DDR1-279ENST00000515529 KRTAP9-9Q9BYP9 154 aa6.55□□□□□ -1.36
DDR1-279ENST00000515529 LCE1EQ5T753 118 aa6.52□□□□□ -1.37
DDR1-279ENST00000515529 MUC5ACP98088 5654 aa6.46□□□□□ -1.38
DDR1-279ENST00000515529 MUC5BQ9HC84 5762 aaPredicted RBP6.43□□□□□ -1.38
DDR1-279ENST00000515529 AHNAKQ09666 5890 aaKnown RBP6.4□□□□□ -1.38
DDR1-279ENST00000515529 LCE3DQ9BYE3 92 aa6.26□□□□□ -1.41
DDR1-279ENST00000515529 LCE1BQ5T7P3 118 aa6.16□□□□□ -1.42
DDR1-279ENST00000515529 KRTAP4-2Q9BYR5 136 aa6.08□□□□□ -1.44
DDR1-279ENST00000515529 LCE1CQ5T751 118 aa6.04□□□□□ -1.44
DDR1-279ENST00000515529 LCE3EQ5T5B0 92 aa5.96□□□□□ -1.46
DDR1-279ENST00000515529 NDUFAF8A1L188 74 aa5.68□□□□□ -1.5
DDR1-279ENST00000515529 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.52□□□□□ -1.53
DDR1-279ENST00000515529 KRTAP5-11Q6L8G4 156 aa5.43□□□□□ -1.54
DDR1-279ENST00000515529 KRTAP4-12Q9BQ66 201 aa5.4□□□□□ -1.54
DDR1-279ENST00000515529 LCE1FQ5T754 118 aa5.2□□□□□ -1.58
DDR1-279ENST00000515529 KRTAP21-2Q3LI59 83 aa5.11□□□□□ -1.59
DDR1-279ENST00000515529 A0A0A0MQY5 61 aa4.74□□□□□ -1.65
DDR1-279ENST00000515529 PRM1P04553 51 aa4.69□□□□□ -1.66
DDR1-279ENST00000515529 PHGR1C9JFL3 82 aa4.67□□□□□ -1.66
DDR1-279ENST00000515529 KRTAP4-4Q9BYR3 166 aa4.66□□□□□ -1.66
DDR1-279ENST00000515529 INE1O15225 51 aa4.64□□□□□ -1.67
DDR1-279ENST00000515529 MUC19Q7Z5P9 8384 aa4.23□□□□□ -1.73
DDR1-279ENST00000515529 KRTAP21-1Q3LI58 79 aa3.48□□□□□ -1.85
DDR1-279ENST00000515529 MUC16Q8WXI7 14507 aa3.05□□□□□ -1.92
DDR1-279ENST00000515529 H3BS24 57 aa2.99□□□□□ -1.93
Retrieved 78 of 20,778 RNA–protein pairs in 158.8 ms