RNA–Protein interactions for RNA: ENST00000515417.5

RACK1-234, Transcript of receptor for activated C kinase 1, humanhuman

TSL 3

Gene RACK1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-234ENST00000515417 KRTAP4-9Q9BYQ8 210 aa3.66□□□□□ -1.82
RACK1-234ENST00000515417 C10orf95Q9H7T3 257 aa3.66□□□□□ -1.82
RACK1-234ENST00000515417 ROMO1P60602 79 aa3.65□□□□□ -1.83
RACK1-234ENST00000515417 KRTAP19-7Q3SYF9 63 aa3.65□□□□□ -1.83
RACK1-234ENST00000515417 KTN1-AS1Q86SY8 53 aa3.65□□□□□ -1.83
RACK1-234ENST00000515417 DSTQ03001 7570 aaKnown RBP3.64□□□□□ -1.83
RACK1-234ENST00000515417 MT1EP04732 61 aa3.62□□□□□ -1.83
RACK1-234ENST00000515417 KRTAP19-5Q3LI72 72 aa3.61□□□□□ -1.83
RACK1-234ENST00000515417 LCE3AQ5TA76 89 aa3.58□□□□□ -1.84
RACK1-234ENST00000515417 TNP1P09430 55 aa3.57□□□□□ -1.84
RACK1-234ENST00000515417 KRTAP19-3Q7Z4W3 81 aa3.54□□□□□ -1.84
RACK1-234ENST00000515417 PRAC1Q96KF2 57 aa3.54□□□□□ -1.84
RACK1-234ENST00000515417 LCE5AQ5TCM9 118 aa3.53□□□□□ -1.84
RACK1-234ENST00000515417 KRTAP25-1Q3LHN0 102 aa3.5□□□□□ -1.85
RACK1-234ENST00000515417 MT1LQ93083 61 aa3.48□□□□□ -1.85
RACK1-234ENST00000515417 LCE1DQ5T752 114 aa3.47□□□□□ -1.85
RACK1-234ENST00000515417 HMCN1Q96RW7 5635 aa3.45□□□□□ -1.86
RACK1-234ENST00000515417 MT1GP13640 62 aa3.44□□□□□ -1.86
RACK1-234ENST00000515417 MT1MQ8N339 61 aa3.43□□□□□ -1.86
RACK1-234ENST00000515417 KRTAP23-1A1A580 65 aa3.42□□□□□ -1.86
RACK1-234ENST00000515417 MT4P47944 62 aa3.42□□□□□ -1.86
RACK1-234ENST00000515417 KRTAP12-3P60328 96 aa3.41□□□□□ -1.86
RACK1-234ENST00000515417 KRTAP4-3Q9BYR4 195 aa3.41□□□□□ -1.86
RACK1-234ENST00000515417 PP632Q6XCG6 107 aa3.4□□□□□ -1.87
RACK1-234ENST00000515417 AHNAK2Q8IVF2 5795 aa3.4□□□□□ -1.87
RACK1-234ENST00000515417 KRTAP5-10Q6L8G5 202 aa3.37□□□□□ -1.87
RACK1-234ENST00000515417 KRTAP4-7Q9BYR0 210 aa3.36□□□□□ -1.87
RACK1-234ENST00000515417 KRTAP4-6Q9BYQ5 205 aa3.31□□□□□ -1.88
RACK1-234ENST00000515417 LCE4AQ5TA78 99 aa3.28□□□□□ -1.88
RACK1-234ENST00000515417 KRTAP5-7Q6L8G8 165 aa3.23□□□□□ -1.89
RACK1-234ENST00000515417 KRTAP15-1Q3LI76 137 aa3.22□□□□□ -1.89
RACK1-234ENST00000515417 KRTAP5-4Q6L8H1 288 aa3.22□□□□□ -1.89
RACK1-234ENST00000515417 KRTAP5-3Q6L8H2 238 aa3.22□□□□□ -1.89
RACK1-234ENST00000515417 SPRR5A0A1B0GTR4 108 aa3.18□□□□□ -1.9
RACK1-234ENST00000515417 LOC100996750A0A140TA64 210 aa3.17□□□□□ -1.9
RACK1-234ENST00000515417 LCE3CQ5T5A8 94 aa3.15□□□□□ -1.91
RACK1-234ENST00000515417 KRTAP5-5Q701N2 237 aaPredicted RBP3.12□□□□□ -1.91
RACK1-234ENST00000515417 KRTAP19-4Q3LI73 84 aa3.1□□□□□ -1.91
RACK1-234ENST00000515417 KRTAP20-2Q3LI61 65 aa3.08□□□□□ -1.92
RACK1-234ENST00000515417 KRTAP9-6A8MVA2 160 aa3.02□□□□□ -1.93
RACK1-234ENST00000515417 KRTAP12-4P60329 112 aa2.99□□□□□ -1.93
RACK1-234ENST00000515417 SYNE1Q8NF91 8797 aaKnown RBP2.97□□□□□ -1.93
RACK1-234ENST00000515417 KRTAP6-1Q3LI64 71 aa2.95□□□□□ -1.94
RACK1-234ENST00000515417 MT1AP04731 61 aa2.94□□□□□ -1.94
RACK1-234ENST00000515417 KRTAP4-11Q9BYQ6 195 aa2.88□□□□□ -1.95
RACK1-234ENST00000515417 LUZP6Q538Z0 58 aa2.87□□□□□ -1.95
RACK1-234ENST00000515417 MUC5ACP98088 5654 aa2.84□□□□□ -1.95
RACK1-234ENST00000515417 AHNAKQ09666 5890 aaKnown RBP2.84□□□□□ -1.96
RACK1-234ENST00000515417 MUC5BQ9HC84 5762 aaPredicted RBP2.83□□□□□ -1.96
RACK1-234ENST00000515417 KRTAP5-8O75690 187 aa2.83□□□□□ -1.96
RACK1-234ENST00000515417 NDUFAF8A1L188 74 aa2.82□□□□□ -1.96
RACK1-234ENST00000515417 KRTAP9-4Q9BYQ2 154 aa2.82□□□□□ -1.96
RACK1-234ENST00000515417 KRTAP5-2Q701N4 177 aa2.81□□□□□ -1.96
RACK1-234ENST00000515417 KRTAP6-2Q3LI66 62 aa2.8□□□□□ -1.96
RACK1-234ENST00000515417 OBSCNQ5VST9 7968 aa2.75□□□□□ -1.97
RACK1-234ENST00000515417 MT3P25713 68 aa2.67□□□□□ -1.98
RACK1-234ENST00000515417 KRTAP9-9Q9BYP9 154 aa2.66□□□□□ -1.98
RACK1-234ENST00000515417 KRTAP5-1Q6L8H4 278 aa2.57□□□□□ -2
RACK1-234ENST00000515417 KRTAP4-12Q9BQ66 201 aa2.53□□□□□ -2
RACK1-234ENST00000515417 A0A0A0MQY5 61 aa2.47□□□□□ -2.01
RACK1-234ENST00000515417 H3BS24 57 aa2.47□□□□□ -2.01
RACK1-234ENST00000515417 LCE1EQ5T753 118 aa2.39□□□□□ -2.03
RACK1-234ENST00000515417 INE1O15225 51 aa2.36□□□□□ -2.03
RACK1-234ENST00000515417 KRTAP4-2Q9BYR5 136 aa2.36□□□□□ -2.03
RACK1-234ENST00000515417 LCE1BQ5T7P3 118 aa2.33□□□□□ -2.04
RACK1-234ENST00000515417 LCE3DQ9BYE3 92 aa2.28□□□□□ -2.04
RACK1-234ENST00000515417 LCE1CQ5T751 118 aa2.23□□□□□ -2.05
RACK1-234ENST00000515417 LCE3EQ5T5B0 92 aa2.18□□□□□ -2.06
RACK1-234ENST00000515417 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.03□□□□□ -2.08
RACK1-234ENST00000515417 KRTAP5-11Q6L8G4 156 aa2.02□□□□□ -2.09
RACK1-234ENST00000515417 PHGR1C9JFL3 82 aa1.97□□□□□ -2.09
RACK1-234ENST00000515417 KRTAP21-2Q3LI59 83 aa1.92□□□□□ -2.1
RACK1-234ENST00000515417 LCE1FQ5T754 118 aa1.9□□□□□ -2.11
RACK1-234ENST00000515417 PRM1P04553 51 aa1.89□□□□□ -2.11
RACK1-234ENST00000515417 KRTAP4-4Q9BYR3 166 aa1.81□□□□□ -2.12
RACK1-234ENST00000515417 MUC19Q7Z5P9 8384 aa1.68□□□□□ -2.14
RACK1-234ENST00000515417 KRTAP21-1Q3LI58 79 aa1.44□□□□□ -2.18
RACK1-234ENST00000515417 MUC16Q8WXI7 14507 aa1.22□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 93.8 ms