RNA–Protein interactions for RNA: ENST00000515233.5

DDR1-278, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-278ENST00000515233 MIR22HGQ0VDD5 57 aa5.49□□□□□ -1.53
DDR1-278ENST00000515233 LCE4AQ5TA78 99 aa5.47□□□□□ -1.53
DDR1-278ENST00000515233 PMAIP1Q13794 54 aa5.45□□□□□ -1.54
DDR1-278ENST00000515233 A0A0D9SG42 100 aa5.43□□□□□ -1.54
DDR1-278ENST00000515233 A0A1B0GU33 70 aa5.43□□□□□ -1.54
DDR1-278ENST00000515233 PP632Q6XCG6 107 aa5.43□□□□□ -1.54
DDR1-278ENST00000515233 HMCN1Q96RW7 5635 aa5.42□□□□□ -1.54
DDR1-278ENST00000515233 KRTAP19-5Q3LI72 72 aa5.41□□□□□ -1.54
DDR1-278ENST00000515233 MT4P47944 62 aa5.4□□□□□ -1.54
DDR1-278ENST00000515233 A8MU10 97 aa5.39□□□□□ -1.55
DDR1-278ENST00000515233 MT1MQ8N339 61 aa5.36□□□□□ -1.55
DDR1-278ENST00000515233 K7ERS5 55 aa5.33□□□□□ -1.56
DDR1-278ENST00000515233 AHNAK2Q8IVF2 5795 aa5.33□□□□□ -1.56
DDR1-278ENST00000515233 KRTAP5-4Q6L8H1 288 aa5.32□□□□□ -1.56
DDR1-278ENST00000515233 KTN1-AS1Q86SY8 53 aa5.32□□□□□ -1.56
DDR1-278ENST00000515233 MT1LQ93083 61 aa5.31□□□□□ -1.56
DDR1-278ENST00000515233 KRTAP5-10Q6L8G5 202 aa5.29□□□□□ -1.56
DDR1-278ENST00000515233 SPINT4Q6UDR6 99 aa5.29□□□□□ -1.56
DDR1-278ENST00000515233 KRTAP12-1P59990 96 aa5.25□□□□□ -1.57
DDR1-278ENST00000515233 KRTAP4-6Q9BYQ5 205 aa5.25□□□□□ -1.57
DDR1-278ENST00000515233 KRTAP4-3Q9BYR4 195 aa5.23□□□□□ -1.57
DDR1-278ENST00000515233 C10orf95Q9H7T3 257 aa5.17□□□□□ -1.58
DDR1-278ENST00000515233 LCE3AQ5TA76 89 aa5.14□□□□□ -1.59
DDR1-278ENST00000515233 KRTAP5-7Q6L8G8 165 aa5.13□□□□□ -1.59
DDR1-278ENST00000515233 KRTAP5-3Q6L8H2 238 aa5.11□□□□□ -1.59
DDR1-278ENST00000515233 TNP1P09430 55 aa5.09□□□□□ -1.59
DDR1-278ENST00000515233 ROMO1P60602 79 aa5.04□□□□□ -1.6
DDR1-278ENST00000515233 KRTAP4-7Q9BYR0 210 aa5.03□□□□□ -1.6
DDR1-278ENST00000515233 KRTAP20-2Q3LI61 65 aa5.02□□□□□ -1.61
DDR1-278ENST00000515233 SPRR5A0A1B0GTR4 108 aa4.98□□□□□ -1.61
DDR1-278ENST00000515233 KRTAP5-5Q701N2 237 aaPredicted RBP4.97□□□□□ -1.61
DDR1-278ENST00000515233 PRAC1Q96KF2 57 aa4.97□□□□□ -1.61
DDR1-278ENST00000515233 KRTAP12-3P60328 96 aa4.95□□□□□ -1.62
DDR1-278ENST00000515233 KRTAP25-1Q3LHN0 102 aa4.91□□□□□ -1.62
DDR1-278ENST00000515233 KRTAP12-4P60329 112 aa4.9□□□□□ -1.63
DDR1-278ENST00000515233 SYNE1Q8NF91 8797 aaKnown RBP4.88□□□□□ -1.63
DDR1-278ENST00000515233 LOC100996750A0A140TA64 210 aa4.78□□□□□ -1.64
DDR1-278ENST00000515233 KRTAP19-4Q3LI73 84 aa4.73□□□□□ -1.65
DDR1-278ENST00000515233 KRTAP4-11Q9BYQ6 195 aa4.66□□□□□ -1.66
DDR1-278ENST00000515233 KRTAP23-1A1A580 65 aa4.63□□□□□ -1.67
DDR1-278ENST00000515233 KRTAP5-2Q701N4 177 aa4.59□□□□□ -1.67
DDR1-278ENST00000515233 KRTAP15-1Q3LI76 137 aa4.55□□□□□ -1.68
DDR1-278ENST00000515233 LCE3CQ5T5A8 94 aa4.54□□□□□ -1.68
DDR1-278ENST00000515233 OBSCNQ5VST9 7968 aa4.54□□□□□ -1.68
DDR1-278ENST00000515233 MT1AP04731 61 aa4.52□□□□□ -1.69
DDR1-278ENST00000515233 KRTAP5-8O75690 187 aa4.51□□□□□ -1.69
DDR1-278ENST00000515233 KRTAP6-1Q3LI64 71 aa4.51□□□□□ -1.69
DDR1-278ENST00000515233 MUC5ACP98088 5654 aa4.44□□□□□ -1.7
DDR1-278ENST00000515233 AHNAKQ09666 5890 aaKnown RBP4.44□□□□□ -1.7
DDR1-278ENST00000515233 MUC5BQ9HC84 5762 aaPredicted RBP4.42□□□□□ -1.7
DDR1-278ENST00000515233 KRTAP9-4Q9BYQ2 154 aa4.42□□□□□ -1.7
DDR1-278ENST00000515233 KRTAP6-2Q3LI66 62 aa4.36□□□□□ -1.71
DDR1-278ENST00000515233 KRTAP9-9Q9BYP9 154 aa4.32□□□□□ -1.72
DDR1-278ENST00000515233 KRTAP9-6A8MVA2 160 aa4.29□□□□□ -1.72
DDR1-278ENST00000515233 LUZP6Q538Z0 58 aa4.21□□□□□ -1.74
DDR1-278ENST00000515233 KRTAP5-1Q6L8H4 278 aa4.19□□□□□ -1.74
DDR1-278ENST00000515233 MT3P25713 68 aa4.17□□□□□ -1.74
DDR1-278ENST00000515233 NDUFAF8A1L188 74 aa4.11□□□□□ -1.75
DDR1-278ENST00000515233 H3BS24 57 aa3.95□□□□□ -1.78
DDR1-278ENST00000515233 LCE1EQ5T753 118 aa3.91□□□□□ -1.78
DDR1-278ENST00000515233 A0A0A0MQY5 61 aa3.82□□□□□ -1.8
DDR1-278ENST00000515233 KRTAP4-2Q9BYR5 136 aa3.71□□□□□ -1.82
DDR1-278ENST00000515233 LCE1BQ5T7P3 118 aa3.65□□□□□ -1.83
DDR1-278ENST00000515233 LCE1CQ5T751 118 aa3.63□□□□□ -1.83
DDR1-278ENST00000515233 INE1O15225 51 aa3.54□□□□□ -1.84
DDR1-278ENST00000515233 KRTAP4-12Q9BQ66 201 aa3.43□□□□□ -1.86
DDR1-278ENST00000515233 LCE1FQ5T754 118 aa3.31□□□□□ -1.88
DDR1-278ENST00000515233 KRTAP5-11Q6L8G4 156 aa3.3□□□□□ -1.88
DDR1-278ENST00000515233 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.27□□□□□ -1.89
DDR1-278ENST00000515233 LCE3DQ9BYE3 92 aa3.22□□□□□ -1.89
DDR1-278ENST00000515233 PHGR1C9JFL3 82 aa3.08□□□□□ -1.92
DDR1-278ENST00000515233 KRTAP21-2Q3LI59 83 aa2.99□□□□□ -1.93
DDR1-278ENST00000515233 LCE3EQ5T5B0 92 aa2.98□□□□□ -1.93
DDR1-278ENST00000515233 MUC19Q7Z5P9 8384 aa2.8□□□□□ -1.96
DDR1-278ENST00000515233 KRTAP4-4Q9BYR3 166 aa2.74□□□□□ -1.97
DDR1-278ENST00000515233 PRM1P04553 51 aa2.59□□□□□ -1.99
DDR1-278ENST00000515233 KRTAP21-1Q3LI58 79 aa2.35□□□□□ -2.03
DDR1-278ENST00000515233 MUC16Q8WXI7 14507 aa1.92□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 150.1 ms