RNA–Protein interactions for RNA: ENST00000515180.5

CDK7-212, Transcript of cyclin dependent kinase 7, humanhuman

TSL 3

Gene CDK7, Length 486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-212ENST00000515180 SMIM26A0A096LP01 95 aa4.85□□□□□ -1.63
CDK7-212ENST00000515180 PCP4P48539 62 aa4.85□□□□□ -1.63
CDK7-212ENST00000515180 KRTAP19-5Q3LI72 72 aa4.81□□□□□ -1.64
CDK7-212ENST00000515180 KRTAP19-3Q7Z4W3 81 aa4.81□□□□□ -1.64
CDK7-212ENST00000515180 ATP5EP56381 51 aaPredicted RBP4.77□□□□□ -1.65
CDK7-212ENST00000515180 C10orf95Q9H7T3 257 aa4.76□□□□□ -1.65
CDK7-212ENST00000515180 PRR15LQ9BU68 103 aa4.74□□□□□ -1.65
CDK7-212ENST00000515180 LINC01558Q9Y6Z2 57 aa4.74□□□□□ -1.65
CDK7-212ENST00000515180 LCE3AQ5TA76 89 aa4.71□□□□□ -1.66
CDK7-212ENST00000515180 TNP1P09430 55 aa4.69□□□□□ -1.66
CDK7-212ENST00000515180 MT1GP13640 62 aa4.69□□□□□ -1.66
CDK7-212ENST00000515180 TMEM258P61165 79 aa4.67□□□□□ -1.66
CDK7-212ENST00000515180 MT1LQ93083 61 aa4.66□□□□□ -1.66
CDK7-212ENST00000515180 MT1MQ8N339 61 aa4.63□□□□□ -1.67
CDK7-212ENST00000515180 PP632Q6XCG6 107 aa4.62□□□□□ -1.67
CDK7-212ENST00000515180 A0A0A0MQY5 61 aa4.6□□□□□ -1.67
CDK7-212ENST00000515180 UQCR11O14957 56 aa4.6□□□□□ -1.67
CDK7-212ENST00000515180 KRTAP4-3Q9BYR4 195 aa4.59□□□□□ -1.67
CDK7-212ENST00000515180 DSTQ03001 7570 aaKnown RBP4.56□□□□□ -1.68
CDK7-212ENST00000515180 MIR22HGQ0VDD5 57 aa4.52□□□□□ -1.69
CDK7-212ENST00000515180 KRTAP12-3P60328 96 aa4.5□□□□□ -1.69
CDK7-212ENST00000515180 PSPHP1O15172 72 aa4.47□□□□□ -1.69
CDK7-212ENST00000515180 MT4P47944 62 aa4.47□□□□□ -1.69
CDK7-212ENST00000515180 KRTAP25-1Q3LHN0 102 aa4.41□□□□□ -1.7
CDK7-212ENST00000515180 Q1T7F1 81 aa4.4□□□□□ -1.71
CDK7-212ENST00000515180 V9GYY9 64 aa4.4□□□□□ -1.71
CDK7-212ENST00000515180 K7ERS5 55 aa4.39□□□□□ -1.71
CDK7-212ENST00000515180 KRTAP5-4Q6L8H1 288 aa4.39□□□□□ -1.71
CDK7-212ENST00000515180 A6NED7 52 aa4.28□□□□□ -1.72
CDK7-212ENST00000515180 KRTAP5-5Q701N2 237 aaPredicted RBP4.23□□□□□ -1.73
CDK7-212ENST00000515180 HMCN1Q96RW7 5635 aa4.23□□□□□ -1.73
CDK7-212ENST00000515180 GPR98Q8WXG9 6306 aa4.23□□□□□ -1.73
CDK7-212ENST00000515180 CDC42SE1Q9NRR8 79 aa4.18□□□□□ -1.74
CDK7-212ENST00000515180 KRTAP20-2Q3LI61 65 aa4.16□□□□□ -1.74
CDK7-212ENST00000515180 RPS28P62857 69 aaKnown RBP4.15□□□□□ -1.75
CDK7-212ENST00000515180 KRTAP5-10Q6L8G5 202 aa4.15□□□□□ -1.75
CDK7-212ENST00000515180 LCE3CQ5T5A8 94 aa4.14□□□□□ -1.75
CDK7-212ENST00000515180 ROMO1P60602 79 aa4.13□□□□□ -1.75
CDK7-212ENST00000515180 SPRR5A0A1B0GTR4 108 aa4.1□□□□□ -1.75
CDK7-212ENST00000515180 KRTAP12-4P60329 112 aa4.1□□□□□ -1.75
CDK7-212ENST00000515180 AHNAK2Q8IVF2 5795 aa4.06□□□□□ -1.76
CDK7-212ENST00000515180 SYNE1Q8NF91 8797 aaKnown RBP4.01□□□□□ -1.77
CDK7-212ENST00000515180 KRTAP5-7Q6L8G8 165 aa3.97□□□□□ -1.77
CDK7-212ENST00000515180 MT3P25713 68 aa3.96□□□□□ -1.78
CDK7-212ENST00000515180 KRTAP6-1Q3LI64 71 aa3.96□□□□□ -1.78
CDK7-212ENST00000515180 KRTAP9-6A8MVA2 160 aa3.95□□□□□ -1.78
CDK7-212ENST00000515180 MT1AP04731 61 aa3.95□□□□□ -1.78
CDK7-212ENST00000515180 KRTAP5-2Q701N4 177 aa3.85□□□□□ -1.79
CDK7-212ENST00000515180 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.81□□□□□ -1.8
CDK7-212ENST00000515180 PRAC1Q96KF2 57 aa3.78□□□□□ -1.8
CDK7-212ENST00000515180 KRTAP6-2Q3LI66 62 aa3.77□□□□□ -1.81
CDK7-212ENST00000515180 NDUFAF8A1L188 74 aa3.68□□□□□ -1.82
CDK7-212ENST00000515180 BRK1Q8WUW1 75 aa3.68□□□□□ -1.82
CDK7-212ENST00000515180 KRTAP5-8O75690 187 aa3.67□□□□□ -1.82
CDK7-212ENST00000515180 KRTAP5-11Q6L8G4 156 aa3.65□□□□□ -1.83
CDK7-212ENST00000515180 LCE1FQ5T754 118 aa3.49□□□□□ -1.85
CDK7-212ENST00000515180 OBSCNQ5VST9 7968 aa3.46□□□□□ -1.86
CDK7-212ENST00000515180 KRTAP5-1Q6L8H4 278 aa3.46□□□□□ -1.86
CDK7-212ENST00000515180 PMAIP1Q13794 54 aa3.44□□□□□ -1.86
CDK7-212ENST00000515180 LCE1EQ5T753 118 aa3.44□□□□□ -1.86
CDK7-212ENST00000515180 MUC5ACP98088 5654 aa3.32□□□□□ -1.88
CDK7-212ENST00000515180 MUC5BQ9HC84 5762 aaPredicted RBP3.31□□□□□ -1.88
CDK7-212ENST00000515180 AHNAKQ09666 5890 aaKnown RBP3.25□□□□□ -1.89
CDK7-212ENST00000515180 KRTAP4-4Q9BYR3 166 aa3.18□□□□□ -1.9
CDK7-212ENST00000515180 LCE1BQ5T7P3 118 aa3.16□□□□□ -1.9
CDK7-212ENST00000515180 PRO0628Q9UI54 55 aa3.12□□□□□ -1.91
CDK7-212ENST00000515180 LCE1CQ5T751 118 aa3.05□□□□□ -1.92
CDK7-212ENST00000515180 KTN1-AS1Q86SY8 53 aa3.01□□□□□ -1.93
CDK7-212ENST00000515180 LCE3DQ9BYE3 92 aa2.98□□□□□ -1.93
CDK7-212ENST00000515180 LCE3EQ5T5B0 92 aa2.96□□□□□ -1.94
CDK7-212ENST00000515180 LUZP6Q538Z0 58 aa2.77□□□□□ -1.97
CDK7-212ENST00000515180 KRTAP21-2Q3LI59 83 aa2.6□□□□□ -1.99
CDK7-212ENST00000515180 PHGR1C9JFL3 82 aa2.42□□□□□ -2.02
CDK7-212ENST00000515180 MUC19Q7Z5P9 8384 aa2.15□□□□□ -2.07
CDK7-212ENST00000515180 PRM1P04553 51 aa2.14□□□□□ -2.07
CDK7-212ENST00000515180 INE1O15225 51 aa1.86□□□□□ -2.11
CDK7-212ENST00000515180 KRTAP21-1Q3LI58 79 aa1.8□□□□□ -2.12
CDK7-212ENST00000515180 MUC16Q8WXI7 14507 aa1.55□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 7.2 ms