RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 SPRR2BP35325 72 aa3.92□□□□□ -1.78
SNF8-214ENST00000515174 SPRR2AP35326 72 aa3.92□□□□□ -1.78
SNF8-214ENST00000515174 KRTAP2-2Q9BYT5 123 aa3.89□□□□□ -1.79
SNF8-214ENST00000515174 KRTAP2-1Q9BYU5 128 aa3.89□□□□□ -1.79
SNF8-214ENST00000515174 KRTAP12-3P60328 96 aa3.88□□□□□ -1.79
SNF8-214ENST00000515174 SPRR2FQ96RM1 72 aa3.88□□□□□ -1.79
SNF8-214ENST00000515174 GPR98Q8WXG9 6306 aa3.83□□□□□ -1.8
SNF8-214ENST00000515174 KRTAP4-8A0A0G2JLE6 195 aa3.81□□□□□ -1.8
SNF8-214ENST00000515174 SPRR5A0A1B0GTR4 108 aa3.81□□□□□ -1.8
SNF8-214ENST00000515174 KRTAP19-4Q3LI73 84 aa3.81□□□□□ -1.8
SNF8-214ENST00000515174 KRTAP4-8Q9BYQ9 185 aa3.81□□□□□ -1.8
SNF8-214ENST00000515174 SPRR2DP22532 72 aa3.79□□□□□ -1.8
SNF8-214ENST00000515174 KRTAP19-5Q3LI72 72 aa3.79□□□□□ -1.8
SNF8-214ENST00000515174 LCE1AQ5T7P2 110 aa3.76□□□□□ -1.81
SNF8-214ENST00000515174 KRTAP19-7Q3SYF9 63 aa3.75□□□□□ -1.81
SNF8-214ENST00000515174 LCE3BQ5TA77 95 aa3.7□□□□□ -1.82
SNF8-214ENST00000515174 MT1EP04732 61 aa3.68□□□□□ -1.82
SNF8-214ENST00000515174 LUZP6Q538Z0 58 aa3.67□□□□□ -1.82
SNF8-214ENST00000515174 LCE3CQ5T5A8 94 aa3.64□□□□□ -1.83
SNF8-214ENST00000515174 MT1LQ93083 61 aa3.62□□□□□ -1.83
SNF8-214ENST00000515174 NDUFAF8A1L188 74 aa3.6□□□□□ -1.83
SNF8-214ENST00000515174 DSTQ03001 7570 aaKnown RBP3.58□□□□□ -1.84
SNF8-214ENST00000515174 MT1GP13640 62 aa3.54□□□□□ -1.84
SNF8-214ENST00000515174 KRTAP4-9Q9BYQ8 210 aa3.54□□□□□ -1.84
SNF8-214ENST00000515174 KRTAP19-3Q7Z4W3 81 aa3.52□□□□□ -1.85
SNF8-214ENST00000515174 LCE5AQ5TCM9 118 aa3.47□□□□□ -1.85
SNF8-214ENST00000515174 MT1MQ8N339 61 aa3.45□□□□□ -1.86
SNF8-214ENST00000515174 KRTAP4-7Q9BYR0 210 aa3.43□□□□□ -1.86
SNF8-214ENST00000515174 KRTAP9-6A8MVA2 160 aa3.41□□□□□ -1.86
SNF8-214ENST00000515174 HMCN1Q96RW7 5635 aa3.4□□□□□ -1.87
SNF8-214ENST00000515174 A0A0A0MQY5 61 aa3.39□□□□□ -1.87
SNF8-214ENST00000515174 LCE1DQ5T752 114 aa3.39□□□□□ -1.87
SNF8-214ENST00000515174 AHNAK2Q8IVF2 5795 aa3.36□□□□□ -1.87
SNF8-214ENST00000515174 KRTAP4-3Q9BYR4 195 aa3.36□□□□□ -1.87
SNF8-214ENST00000515174 MT4P47944 62 aa3.35□□□□□ -1.87
SNF8-214ENST00000515174 LOC100996750A0A140TA64 210 aa3.29□□□□□ -1.88
SNF8-214ENST00000515174 LCE4AQ5TA78 99 aa3.29□□□□□ -1.88
SNF8-214ENST00000515174 KRTAP4-6Q9BYQ5 205 aa3.29□□□□□ -1.88
SNF8-214ENST00000515174 KRTAP5-10Q6L8G5 202 aa3.28□□□□□ -1.88
SNF8-214ENST00000515174 KRTAP5-7Q6L8G8 165 aa3.21□□□□□ -1.9
SNF8-214ENST00000515174 KRTAP4-12Q9BQ66 201 aa3.18□□□□□ -1.9
SNF8-214ENST00000515174 KRTAP5-3Q6L8H2 238 aa3.15□□□□□ -1.91
SNF8-214ENST00000515174 KRTAP5-5Q701N2 237 aaPredicted RBP3.14□□□□□ -1.91
SNF8-214ENST00000515174 KRTAP5-4Q6L8H1 288 aa3.12□□□□□ -1.91
SNF8-214ENST00000515174 MT1AP04731 61 aa3.1□□□□□ -1.91
SNF8-214ENST00000515174 INE1O15225 51 aa3.08□□□□□ -1.92
SNF8-214ENST00000515174 KRTAP9-4Q9BYQ2 154 aa3.04□□□□□ -1.92
SNF8-214ENST00000515174 KRTAP6-1Q3LI64 71 aa3.02□□□□□ -1.93
SNF8-214ENST00000515174 KRTAP9-9Q9BYP9 154 aa3.01□□□□□ -1.93
SNF8-214ENST00000515174 KRTAP20-2Q3LI61 65 aa3□□□□□ -1.93
SNF8-214ENST00000515174 KRTAP12-4P60329 112 aa2.94□□□□□ -1.94
SNF8-214ENST00000515174 AHNAKQ09666 5890 aaKnown RBP2.94□□□□□ -1.94
SNF8-214ENST00000515174 SYNE1Q8NF91 8797 aaKnown RBP2.91□□□□□ -1.94
SNF8-214ENST00000515174 MUC5ACP98088 5654 aa2.86□□□□□ -1.95
SNF8-214ENST00000515174 KRTAP4-11Q9BYQ6 195 aa2.83□□□□□ -1.96
SNF8-214ENST00000515174 MT3P25713 68 aa2.81□□□□□ -1.96
SNF8-214ENST00000515174 MUC5BQ9HC84 5762 aaPredicted RBP2.8□□□□□ -1.96
SNF8-214ENST00000515174 KRTAP5-8O75690 187 aa2.75□□□□□ -1.97
SNF8-214ENST00000515174 KRTAP6-2Q3LI66 62 aa2.75□□□□□ -1.97
SNF8-214ENST00000515174 LCE3DQ9BYE3 92 aa2.75□□□□□ -1.97
SNF8-214ENST00000515174 KRTAP5-2Q701N4 177 aa2.72□□□□□ -1.97
SNF8-214ENST00000515174 LCE3EQ5T5B0 92 aa2.7□□□□□ -1.98
SNF8-214ENST00000515174 OBSCNQ5VST9 7968 aa2.61□□□□□ -1.99
SNF8-214ENST00000515174 KRTAP4-2Q9BYR5 136 aa2.58□□□□□ -2
SNF8-214ENST00000515174 LCE1EQ5T753 118 aa2.47□□□□□ -2.01
SNF8-214ENST00000515174 KRTAP5-1Q6L8H4 278 aa2.46□□□□□ -2.02
SNF8-214ENST00000515174 PRM1P04553 51 aa2.34□□□□□ -2.03
SNF8-214ENST00000515174 LCE1CQ5T751 118 aa2.28□□□□□ -2.04
SNF8-214ENST00000515174 LCE1BQ5T7P3 118 aa2.28□□□□□ -2.04
SNF8-214ENST00000515174 LCE1FQ5T754 118 aa2.27□□□□□ -2.05
SNF8-214ENST00000515174 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.17□□□□□ -2.06
SNF8-214ENST00000515174 KRTAP21-2Q3LI59 83 aa2.01□□□□□ -2.09
SNF8-214ENST00000515174 KRTAP5-11Q6L8G4 156 aa2□□□□□ -2.09
SNF8-214ENST00000515174 PHGR1C9JFL3 82 aa1.98□□□□□ -2.09
SNF8-214ENST00000515174 KRTAP4-4Q9BYR3 166 aa1.76□□□□□ -2.13
SNF8-214ENST00000515174 MUC19Q7Z5P9 8384 aa1.64□□□□□ -2.15
SNF8-214ENST00000515174 KRTAP21-1Q3LI58 79 aa1.51□□□□□ -2.17
SNF8-214ENST00000515174 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 39.4 ms