RNA–Protein interactions for RNA: ENST00000514693.5

PROM1-217, Transcript of prominin 1, humanhuman

TSL 4

Gene PROM1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-217ENST00000514693 SSPOA2VEC9 5147 aa1.31□□□□□ -2.2
PROM1-217ENST00000514693 SYNE2Q8WXH0 6885 aaKnown RBP1.3□□□□□ -2.2
PROM1-217ENST00000514693 H3BNG1 76 aa1.29□□□□□ -2.2
PROM1-217ENST00000514693 FCGBPQ9Y6R7 5405 aaPredicted RBP1.29□□□□□ -2.2
PROM1-217ENST00000514693 PRLHP81277 87 aa1.28□□□□□ -2.2
PROM1-217ENST00000514693 PKHD1L1Q86WI1 4243 aa1.28□□□□□ -2.2
PROM1-217ENST00000514693 FAT3Q8TDW7 4589 aa1.27□□□□□ -2.21
PROM1-217ENST00000514693 MT1HL1P0DM35 61 aa1.27□□□□□ -2.21
PROM1-217ENST00000514693 DEFB136Q30KP8 78 aa1.27□□□□□ -2.21
PROM1-217ENST00000514693 SPART-AS1P0CW21 52 aa1.26□□□□□ -2.21
PROM1-217ENST00000514693 S4R3F8 94 aa1.26□□□□□ -2.21
PROM1-217ENST00000514693 NEBP20929 6669 aa1.26□□□□□ -2.21
PROM1-217ENST00000514693 A0A096LPF7 62 aa1.25□□□□□ -2.21
PROM1-217ENST00000514693 LINC01556Q5JQF7 62 aa1.25□□□□□ -2.21
PROM1-217ENST00000514693 TNXBP22105 4242 aa1.24□□□□□ -2.21
PROM1-217ENST00000514693 SPINK1P00995 79 aa1.24□□□□□ -2.21
PROM1-217ENST00000514693 LPAP08519 4548 aa1.24□□□□□ -2.21
PROM1-217ENST00000514693 MACF1Q9UPN3 7388 aaKnown RBP1.23□□□□□ -2.21
PROM1-217ENST00000514693 KRTAP20-1Q3LI63 56 aa1.22□□□□□ -2.21
PROM1-217ENST00000514693 HTN3P15516 51 aa1.2□□□□□ -2.22
PROM1-217ENST00000514693 DEFB135Q30KP9 77 aa1.2□□□□□ -2.22
PROM1-217ENST00000514693 GPR98Q8WXG9 6306 aa1.2□□□□□ -2.22
PROM1-217ENST00000514693 USH2AO75445 5202 aa1.2□□□□□ -2.22
PROM1-217ENST00000514693 DEFB4AO15263 64 aa1.19□□□□□ -2.22
PROM1-217ENST00000514693 M0QZ58 72 aa1.18□□□□□ -2.22
PROM1-217ENST00000514693 A0A096LNI7 61 aa1.16□□□□□ -2.22
PROM1-217ENST00000514693 DNAH8Q96JB1 4490 aa1.15□□□□□ -2.23
PROM1-217ENST00000514693 KRTAP2-3P0C7H8 128 aa1.14□□□□□ -2.23
PROM1-217ENST00000514693 KRTAP2-4Q9BYR9 128 aa1.14□□□□□ -2.23
PROM1-217ENST00000514693 KMT2DO14686 5537 aa1.14□□□□□ -2.23
PROM1-217ENST00000514693 SPINK6Q6UWN8 80 aa1.13□□□□□ -2.23
PROM1-217ENST00000514693 KRTAP19-3Q7Z4W3 81 aa1.11□□□□□ -2.23
PROM1-217ENST00000514693 RPS29P62273 56 aaKnown RBP1.1□□□□□ -2.23
PROM1-217ENST00000514693 MT1HP80294 61 aa1.1□□□□□ -2.23
PROM1-217ENST00000514693 MUC12Q9UKN1 5478 aa1.09□□□□□ -2.23
PROM1-217ENST00000514693 KRTAP19-2Q3LHN2 52 aa1.08□□□□□ -2.24
PROM1-217ENST00000514693 KRTAP2-1Q9BYU5 128 aa1.08□□□□□ -2.24
PROM1-217ENST00000514693 MUC17Q685J3 4493 aa1.06□□□□□ -2.24
PROM1-217ENST00000514693 KRTAP19-6Q3LI70 58 aa1.05□□□□□ -2.24
PROM1-217ENST00000514693 TNP1P09430 55 aa1.04□□□□□ -2.24
PROM1-217ENST00000514693 MDN1Q9NU22 5596 aa1.04□□□□□ -2.24
PROM1-217ENST00000514693 AHNAK2Q8IVF2 5795 aa1.02□□□□□ -2.25
PROM1-217ENST00000514693 C9orf92A6NGG3 77 aa1.01□□□□□ -2.25
PROM1-217ENST00000514693 M0R2T5 61 aa1.01□□□□□ -2.25
PROM1-217ENST00000514693 DSTQ03001 7570 aaKnown RBP1.01□□□□□ -2.25
PROM1-217ENST00000514693 KRTAP5-10Q6L8G5 202 aa0.98□□□□□ -2.25
PROM1-217ENST00000514693 FLGP20930 4061 aaPredicted RBP0.97□□□□□ -2.25
PROM1-217ENST00000514693 MT2AP02795 61 aa0.96□□□□□ -2.26
PROM1-217ENST00000514693 MT1FP04733 61 aa0.94□□□□□ -2.26
PROM1-217ENST00000514693 SPRR2EP22531 72 aa0.94□□□□□ -2.26
PROM1-217ENST00000514693 SPRR2BP35325 72 aa0.94□□□□□ -2.26
PROM1-217ENST00000514693 SPRR2AP35326 72 aa0.94□□□□□ -2.26
PROM1-217ENST00000514693 KRTAP8-1Q8IUC2 63 aa0.93□□□□□ -2.26
PROM1-217ENST00000514693 AHNAKQ09666 5890 aaKnown RBP0.93□□□□□ -2.26
PROM1-217ENST00000514693 SPRR2DP22532 72 aa0.91□□□□□ -2.26
PROM1-217ENST00000514693 MUC5BQ9HC84 5762 aaPredicted RBP0.89□□□□□ -2.27
PROM1-217ENST00000514693 SPRR2FQ96RM1 72 aa0.88□□□□□ -2.27
PROM1-217ENST00000514693 MUC5ACP98088 5654 aa0.86□□□□□ -2.27
PROM1-217ENST00000514693 MT4P47944 62 aa0.84□□□□□ -2.27
PROM1-217ENST00000514693 SPRR2GQ9BYE4 73 aa0.81□□□□□ -2.28
PROM1-217ENST00000514693 MT1BP07438 61 aa0.79□□□□□ -2.28
PROM1-217ENST00000514693 KRTAP19-5Q3LI72 72 aa0.78□□□□□ -2.28
PROM1-217ENST00000514693 PRM1P04553 51 aa0.77□□□□□ -2.29
PROM1-217ENST00000514693 MUC16Q8WXI7 14507 aa0.76□□□□□ -2.29
PROM1-217ENST00000514693 KRTAP19-8Q3LI54 63 aa0.76□□□□□ -2.29
PROM1-217ENST00000514693 MT1AP04731 61 aa0.75□□□□□ -2.29
PROM1-217ENST00000514693 MT1XP80297 61 aa0.72□□□□□ -2.29
PROM1-217ENST00000514693 KRTAP20-2Q3LI61 65 aa0.72□□□□□ -2.29
PROM1-217ENST00000514693 KRTAP21-1Q3LI58 79 aa0.71□□□□□ -2.3
PROM1-217ENST00000514693 SYNE1Q8NF91 8797 aaKnown RBP0.71□□□□□ -2.3
PROM1-217ENST00000514693 MT1EP04732 61 aa0.68□□□□□ -2.3
PROM1-217ENST00000514693 MT1LQ93083 61 aa0.66□□□□□ -2.3
PROM1-217ENST00000514693 KRTAP6-2Q3LI66 62 aa0.65□□□□□ -2.31
PROM1-217ENST00000514693 KRTAP19-7Q3SYF9 63 aa0.64□□□□□ -2.31
PROM1-217ENST00000514693 MT1GP13640 62 aa0.62□□□□□ -2.31
PROM1-217ENST00000514693 MT1MQ8N339 61 aa0.59□□□□□ -2.31
PROM1-217ENST00000514693 PHGR1C9JFL3 82 aa0.57□□□□□ -2.32
PROM1-217ENST00000514693 KRTAP6-1Q3LI64 71 aa0.52□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 92.4 ms