RNA–Protein interactions for RNA: ENST00000514326.5

SEC31A-238, Transcript of SEC31 homolog A, COPII coat complex component, human

TSL 3

Gene SEC31A, Length 847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC31A-238	ENST00000514326	KRTAP2-1	Q9BYU5	128 aa		5.97	□□□□□ -1.45
SEC31A-238	ENST00000514326	PRR15L	Q9BU68	103 aa		5.96	□□□□□ -1.46
SEC31A-238	ENST00000514326		A8MU10	97 aa		5.93	□□□□□ -1.46
SEC31A-238	ENST00000514326	KRTAP19-7	Q3SYF9	63 aa		5.92	□□□□□ -1.46
SEC31A-238	ENST00000514326	KRTAP5-3	Q6L8H2	238 aa		5.91	□□□□□ -1.46
SEC31A-238	ENST00000514326	KRTAP23-1	A1A580	65 aa		5.87	□□□□□ -1.47
SEC31A-238	ENST00000514326	MT1E	P04732	61 aa		5.86	□□□□□ -1.47
SEC31A-238	ENST00000514326	PSPHP1	O15172	72 aa		5.82	□□□□□ -1.48
SEC31A-238	ENST00000514326	KRTAP19-5	Q3LI72	72 aa		5.79	□□□□□ -1.48
SEC31A-238	ENST00000514326	KRTAP15-1	Q3LI76	137 aa		5.78	□□□□□ -1.48
SEC31A-238	ENST00000514326	KRTAP19-3	Q7Z4W3	81 aa		5.78	□□□□□ -1.48
SEC31A-238	ENST00000514326	UQCR11	O14957	56 aa		5.77	□□□□□ -1.49
SEC31A-238	ENST00000514326	C10orf95	Q9H7T3	257 aa		5.76	□□□□□ -1.49
SEC31A-238	ENST00000514326	DST	Q03001	7570 aa	Known RBP	5.71	□□□□□ -1.5
SEC31A-238	ENST00000514326		A6NED7	52 aa		5.69	□□□□□ -1.5
SEC31A-238	ENST00000514326	TNP1	P09430	55 aa		5.68	□□□□□ -1.5
SEC31A-238	ENST00000514326	MIR22HG	Q0VDD5	57 aa		5.68	□□□□□ -1.5
SEC31A-238	ENST00000514326	LCE3A	Q5TA76	89 aa		5.68	□□□□□ -1.5
SEC31A-238	ENST00000514326	MT1G	P13640	62 aa		5.64	□□□□□ -1.51
SEC31A-238	ENST00000514326	MT1L	Q93083	61 aa		5.61	□□□□□ -1.51
SEC31A-238	ENST00000514326	CDC42SE1	Q9NRR8	79 aa		5.58	□□□□□ -1.52
SEC31A-238	ENST00000514326	PP632	Q6XCG6	107 aa		5.57	□□□□□ -1.52
SEC31A-238	ENST00000514326	MT1M	Q8N339	61 aa		5.57	□□□□□ -1.52
SEC31A-238	ENST00000514326		K7ERS5	55 aa		5.5	□□□□□ -1.53
SEC31A-238	ENST00000514326	BRK1	Q8WUW1	75 aa		5.5	□□□□□ -1.53
SEC31A-238	ENST00000514326	KRTAP4-3	Q9BYR4	195 aa		5.49	□□□□□ -1.53
SEC31A-238	ENST00000514326	KRTAP12-3	P60328	96 aa		5.44	□□□□□ -1.54
SEC31A-238	ENST00000514326	GPR98	Q8WXG9	6306 aa		5.38	□□□□□ -1.55
SEC31A-238	ENST00000514326	KRTAP25-1	Q3LHN0	102 aa		5.38	□□□□□ -1.55
SEC31A-238	ENST00000514326	PRO0628	Q9UI54	55 aa		5.36	□□□□□ -1.55
SEC31A-238	ENST00000514326	MT4	P47944	62 aa		5.32	□□□□□ -1.56
SEC31A-238	ENST00000514326	HMCN1	Q96RW7	5635 aa		5.32	□□□□□ -1.56
SEC31A-238	ENST00000514326	KRTAP5-4	Q6L8H1	288 aa		5.27	□□□□□ -1.57
SEC31A-238	ENST00000514326	PMAIP1	Q13794	54 aa		5.23	□□□□□ -1.57
SEC31A-238	ENST00000514326	ROMO1	P60602	79 aa		5.2	□□□□□ -1.58
SEC31A-238	ENST00000514326	AHNAK2	Q8IVF2	5795 aa		5.17	□□□□□ -1.58
SEC31A-238	ENST00000514326	KRTAP5-5	Q701N2	237 aa	Predicted RBP	5.1	□□□□□ -1.59
SEC31A-238	ENST00000514326	LCE3C	Q5T5A8	94 aa		5.02	□□□□□ -1.61
SEC31A-238	ENST00000514326	KRTAP20-2	Q3LI61	65 aa		4.98	□□□□□ -1.61
SEC31A-238	ENST00000514326	KTN1-AS1	Q86SY8	53 aa		4.98	□□□□□ -1.61
SEC31A-238	ENST00000514326	SPRR5	A0A1B0GTR4	108 aa		4.94	□□□□□ -1.62
SEC31A-238	ENST00000514326	KRTAP12-4	P60329	112 aa		4.94	□□□□□ -1.62
SEC31A-238	ENST00000514326	KRTAP5-10	Q6L8G5	202 aa		4.94	□□□□□ -1.62
SEC31A-238	ENST00000514326	SYNE1	Q8NF91	8797 aa	Known RBP	4.93	□□□□□ -1.62
SEC31A-238	ENST00000514326	PRAC1	Q96KF2	57 aa		4.82	□□□□□ -1.64
SEC31A-238	ENST00000514326	KRTAP9-6	A8MVA2	160 aa		4.77	□□□□□ -1.65
SEC31A-238	ENST00000514326	MT1A	P04731	61 aa		4.76	□□□□□ -1.65
SEC31A-238	ENST00000514326	KRTAP6-1	Q3LI64	71 aa		4.75	□□□□□ -1.65
SEC31A-238	ENST00000514326	KRTAP5-7	Q6L8G8	165 aa		4.73	□□□□□ -1.65
SEC31A-238	ENST00000514326	SVIP	Q8NHG7	77 aa		4.66	□□□□□ -1.66
SEC31A-238	ENST00000514326	KRTAP5-2	Q701N4	177 aa		4.62	□□□□□ -1.67
SEC31A-238	ENST00000514326	KRTAP5-11	Q6L8G4	156 aa		4.55	□□□□□ -1.68
SEC31A-238	ENST00000514326	KRTAP6-2	Q3LI66	62 aa		4.53	□□□□□ -1.68
SEC31A-238	ENST00000514326	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.47	□□□□□ -1.69
SEC31A-238	ENST00000514326	KRTAP5-8	O75690	187 aa		4.38	□□□□□ -1.71
SEC31A-238	ENST00000514326	MT3	P25713	68 aa		4.35	□□□□□ -1.71
SEC31A-238	ENST00000514326	OBSCN	Q5VST9	7968 aa		4.34	□□□□□ -1.71
SEC31A-238	ENST00000514326	LCE1E	Q5T753	118 aa		4.34	□□□□□ -1.71
SEC31A-238	ENST00000514326	AHNAK	Q09666	5890 aa	Known RBP	4.26	□□□□□ -1.73
SEC31A-238	ENST00000514326	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.23	□□□□□ -1.73
SEC31A-238	ENST00000514326		A0A0A0MQY5	61 aa		4.2	□□□□□ -1.74
SEC31A-238	ENST00000514326	MUC5AC	P98088	5654 aa		4.18	□□□□□ -1.74
SEC31A-238	ENST00000514326	KRTAP5-1	Q6L8H4	278 aa		4.15	□□□□□ -1.75
SEC31A-238	ENST00000514326	LUZP6	Q538Z0	58 aa		4.07	□□□□□ -1.76
SEC31A-238	ENST00000514326	LCE1F	Q5T754	118 aa		4.04	□□□□□ -1.76
SEC31A-238	ENST00000514326	NDUFAF8	A1L188	74 aa		3.8	□□□□□ -1.8
SEC31A-238	ENST00000514326	LCE1B	Q5T7P3	118 aa		3.78	□□□□□ -1.8
SEC31A-238	ENST00000514326	KRTAP4-4	Q9BYR3	166 aa		3.75	□□□□□ -1.81
SEC31A-238	ENST00000514326	LCE1C	Q5T751	118 aa		3.68	□□□□□ -1.82
SEC31A-238	ENST00000514326	LCE3D	Q9BYE3	92 aa		3.62	□□□□□ -1.83
SEC31A-238	ENST00000514326	LCE3E	Q5T5B0	92 aa		3.49	□□□□□ -1.85
SEC31A-238	ENST00000514326	INE1	O15225	51 aa		3.23	□□□□□ -1.89
SEC31A-238	ENST00000514326	KRTAP21-2	Q3LI59	83 aa		3.12	□□□□□ -1.91
SEC31A-238	ENST00000514326	PHGR1	C9JFL3	82 aa		2.89	□□□□□ -1.95
SEC31A-238	ENST00000514326	PRM1	P04553	51 aa		2.69	□□□□□ -1.98
SEC31A-238	ENST00000514326	MUC19	Q7Z5P9	8384 aa		2.68	□□□□□ -1.98
SEC31A-238	ENST00000514326	KRTAP21-1	Q3LI58	79 aa		2.17	□□□□□ -2.06
SEC31A-238	ENST00000514326	MUC16	Q8WXI7	14507 aa		1.91	□□□□□ -2.1

Retrieved 78 of 20,778 RNA–protein pairs in 107.1 ms