RNA–Protein interactions for RNA: ENST00000514089.5

SNF8-212, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 571 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-212ENST00000514089 KRTAP19-3Q7Z4W3 81 aa5.28□□□□□ -1.56
SNF8-212ENST00000514089 KRTAP12-3P60328 96 aa5.23□□□□□ -1.57
SNF8-212ENST00000514089 LCE5AQ5TCM9 118 aa5.22□□□□□ -1.57
SNF8-212ENST00000514089 PP632Q6XCG6 107 aa5.22□□□□□ -1.57
SNF8-212ENST00000514089 MT1GP13640 62 aa5.21□□□□□ -1.58
SNF8-212ENST00000514089 LCE3BQ5TA77 95 aa5.21□□□□□ -1.58
SNF8-212ENST00000514089 KRTAP2-2Q9BYT5 123 aa5.21□□□□□ -1.58
SNF8-212ENST00000514089 KRTAP2-1Q9BYU5 128 aa5.21□□□□□ -1.58
SNF8-212ENST00000514089 BRK1Q8WUW1 75 aa5.18□□□□□ -1.58
SNF8-212ENST00000514089 KRTAP23-1A1A580 65 aa5.17□□□□□ -1.58
SNF8-212ENST00000514089 MT1LQ93083 61 aa5.17□□□□□ -1.58
SNF8-212ENST00000514089 MT1MQ8N339 61 aa5.09□□□□□ -1.59
SNF8-212ENST00000514089 DSTQ03001 7570 aaKnown RBP4.98□□□□□ -1.61
SNF8-212ENST00000514089 KRTAP15-1Q3LI76 137 aa4.98□□□□□ -1.61
SNF8-212ENST00000514089 KRTAP4-3Q9BYR4 195 aa4.96□□□□□ -1.62
SNF8-212ENST00000514089 KRTAP19-4Q3LI73 84 aa4.94□□□□□ -1.62
SNF8-212ENST00000514089 KRTAP4-7Q9BYR0 210 aa4.94□□□□□ -1.62
SNF8-212ENST00000514089 PMAIP1Q13794 54 aa4.9□□□□□ -1.63
SNF8-212ENST00000514089 LCE3CQ5T5A8 94 aa4.83□□□□□ -1.64
SNF8-212ENST00000514089 KRTAP4-9Q9BYQ8 210 aa4.78□□□□□ -1.64
SNF8-212ENST00000514089 LCE4AQ5TA78 99 aa4.76□□□□□ -1.65
SNF8-212ENST00000514089 MT4P47944 62 aa4.71□□□□□ -1.66
SNF8-212ENST00000514089 PRO0628Q9UI54 55 aa4.71□□□□□ -1.66
SNF8-212ENST00000514089 LOC100996750A0A140TA64 210 aa4.67□□□□□ -1.66
SNF8-212ENST00000514089 LCE1DQ5T752 114 aa4.67□□□□□ -1.66
SNF8-212ENST00000514089 KRTAP5-4Q6L8H1 288 aa4.64□□□□□ -1.67
SNF8-212ENST00000514089 PRAC1Q96KF2 57 aa4.59□□□□□ -1.67
SNF8-212ENST00000514089 KRTAP5-5Q701N2 237 aaPredicted RBP4.58□□□□□ -1.68
SNF8-212ENST00000514089 KRTAP12-4P60329 112 aa4.55□□□□□ -1.68
SNF8-212ENST00000514089 KRTAP4-6Q9BYQ5 205 aa4.54□□□□□ -1.68
SNF8-212ENST00000514089 HMCN1Q96RW7 5635 aa4.52□□□□□ -1.69
SNF8-212ENST00000514089 SVIPQ8NHG7 77 aa4.51□□□□□ -1.69
SNF8-212ENST00000514089 KRTAP9-6A8MVA2 160 aa4.46□□□□□ -1.7
SNF8-212ENST00000514089 KTN1-AS1Q86SY8 53 aa4.44□□□□□ -1.7
SNF8-212ENST00000514089 SPRR5A0A1B0GTR4 108 aa4.42□□□□□ -1.7
SNF8-212ENST00000514089 MT1AP04731 61 aa4.41□□□□□ -1.7
SNF8-212ENST00000514089 KRTAP20-2Q3LI61 65 aa4.4□□□□□ -1.71
SNF8-212ENST00000514089 KRTAP6-1Q3LI64 71 aa4.36□□□□□ -1.71
SNF8-212ENST00000514089 SYNE1Q8NF91 8797 aaKnown RBP4.33□□□□□ -1.72
SNF8-212ENST00000514089 GPR98Q8WXG9 6306 aa4.33□□□□□ -1.72
SNF8-212ENST00000514089 KRTAP9-4Q9BYQ2 154 aa4.26□□□□□ -1.73
SNF8-212ENST00000514089 KRTAP5-3Q6L8H2 238 aa4.22□□□□□ -1.73
SNF8-212ENST00000514089 AHNAK2Q8IVF2 5795 aa4.21□□□□□ -1.73
SNF8-212ENST00000514089 KRTAP6-2Q3LI66 62 aa4.15□□□□□ -1.75
SNF8-212ENST00000514089 KRTAP5-10Q6L8G5 202 aa4.15□□□□□ -1.75
SNF8-212ENST00000514089 KRTAP5-2Q701N4 177 aa4.1□□□□□ -1.75
SNF8-212ENST00000514089 MT3P25713 68 aa4.08□□□□□ -1.76
SNF8-212ENST00000514089 KRTAP4-11Q9BYQ6 195 aa3.98□□□□□ -1.77
SNF8-212ENST00000514089 LUZP6Q538Z0 58 aa3.97□□□□□ -1.77
SNF8-212ENST00000514089 KRTAP5-7Q6L8G8 165 aa3.96□□□□□ -1.78
SNF8-212ENST00000514089 OBSCNQ5VST9 7968 aa3.8□□□□□ -1.8
SNF8-212ENST00000514089 KRTAP5-8O75690 187 aa3.79□□□□□ -1.8
SNF8-212ENST00000514089 KRTAP9-9Q9BYP9 154 aa3.65□□□□□ -1.83
SNF8-212ENST00000514089 KRTAP5-1Q6L8H4 278 aa3.64□□□□□ -1.83
SNF8-212ENST00000514089 LCE1EQ5T753 118 aa3.63□□□□□ -1.83
SNF8-212ENST00000514089 LCE3DQ9BYE3 92 aa3.57□□□□□ -1.84
SNF8-212ENST00000514089 MUC5ACP98088 5654 aa3.51□□□□□ -1.85
SNF8-212ENST00000514089 LCE1BQ5T7P3 118 aa3.48□□□□□ -1.85
SNF8-212ENST00000514089 MUC5BQ9HC84 5762 aaPredicted RBP3.45□□□□□ -1.86
SNF8-212ENST00000514089 AHNAKQ09666 5890 aaKnown RBP3.41□□□□□ -1.86
SNF8-212ENST00000514089 LCE3EQ5T5B0 92 aa3.4□□□□□ -1.87
SNF8-212ENST00000514089 NDUFAF8A1L188 74 aa3.38□□□□□ -1.87
SNF8-212ENST00000514089 LCE1CQ5T751 118 aa3.36□□□□□ -1.87
SNF8-212ENST00000514089 KRTAP4-2Q9BYR5 136 aa3.35□□□□□ -1.87
SNF8-212ENST00000514089 H3BS24 57 aa3.17□□□□□ -1.9
SNF8-212ENST00000514089 A0A0A0MQY5 61 aa3.07□□□□□ -1.92
SNF8-212ENST00000514089 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.04□□□□□ -1.92
SNF8-212ENST00000514089 KRTAP4-12Q9BQ66 201 aa3.03□□□□□ -1.92
SNF8-212ENST00000514089 KRTAP5-11Q6L8G4 156 aa2.99□□□□□ -1.93
SNF8-212ENST00000514089 LCE1FQ5T754 118 aa2.89□□□□□ -1.95
SNF8-212ENST00000514089 KRTAP21-2Q3LI59 83 aa2.84□□□□□ -1.95
SNF8-212ENST00000514089 INE1O15225 51 aa2.76□□□□□ -1.97
SNF8-212ENST00000514089 PRM1P04553 51 aa2.71□□□□□ -1.98
SNF8-212ENST00000514089 KRTAP4-4Q9BYR3 166 aa2.63□□□□□ -1.99
SNF8-212ENST00000514089 PHGR1C9JFL3 82 aa2.59□□□□□ -1.99
SNF8-212ENST00000514089 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
SNF8-212ENST00000514089 KRTAP21-1Q3LI58 79 aa1.87□□□□□ -2.11
SNF8-212ENST00000514089 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 115.8 ms