RNA–Protein interactions for RNA: ENST00000514055.5

CAST-240, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-240ENST00000514055 KRTAP12-2P59991 146 aa3.5□□□□□ -1.85
CAST-240ENST00000514055 A8MU10 97 aa3.49□□□□□ -1.85
CAST-240ENST00000514055 KRTAP12-1P59990 96 aa3.49□□□□□ -1.85
CAST-240ENST00000514055 V9GYY9 64 aa3.47□□□□□ -1.85
CAST-240ENST00000514055 UQCR11O14957 56 aa3.46□□□□□ -1.86
CAST-240ENST00000514055 KRTAP10-7P60409 375 aaPredicted RBP3.45□□□□□ -1.86
CAST-240ENST00000514055 KRTAP10-12P60413 245 aa3.44□□□□□ -1.86
CAST-240ENST00000514055 Q1T7F1 81 aa3.44□□□□□ -1.86
CAST-240ENST00000514055 PSPHP1O15172 72 aa3.43□□□□□ -1.86
CAST-240ENST00000514055 RPS28P62857 69 aaKnown RBP3.41□□□□□ -1.86
CAST-240ENST00000514055 KRTAP5-10Q6L8G5 202 aa3.41□□□□□ -1.86
CAST-240ENST00000514055 MIR22HGQ0VDD5 57 aa3.4□□□□□ -1.87
CAST-240ENST00000514055 MT4P47944 62 aa3.36□□□□□ -1.87
CAST-240ENST00000514055 A6NED7 52 aa3.32□□□□□ -1.88
CAST-240ENST00000514055 C10orf95Q9H7T3 257 aa3.32□□□□□ -1.88
CAST-240ENST00000514055 K7ERS5 55 aa3.31□□□□□ -1.88
CAST-240ENST00000514055 KRTAP5-7Q6L8G8 165 aa3.31□□□□□ -1.88
CAST-240ENST00000514055 SPRR5A0A1B0GTR4 108 aa3.3□□□□□ -1.88
CAST-240ENST00000514055 TNP1P09430 55 aa3.29□□□□□ -1.88
CAST-240ENST00000514055 KRTAP19-7Q3SYF9 63 aa3.23□□□□□ -1.89
CAST-240ENST00000514055 LCE3AQ5TA76 89 aa3.22□□□□□ -1.89
CAST-240ENST00000514055 CDC42SE1Q9NRR8 79 aa3.21□□□□□ -1.9
CAST-240ENST00000514055 MT1EP04732 61 aa3.2□□□□□ -1.9
CAST-240ENST00000514055 KRTAP19-5Q3LI72 72 aa3.2□□□□□ -1.9
CAST-240ENST00000514055 KRTAP19-3Q7Z4W3 81 aa3.2□□□□□ -1.9
CAST-240ENST00000514055 KRTAP25-1Q3LHN0 102 aa3.19□□□□□ -1.9
CAST-240ENST00000514055 KRTAP5-4Q6L8H1 288 aa3.14□□□□□ -1.91
CAST-240ENST00000514055 ROMO1P60602 79 aa3.11□□□□□ -1.91
CAST-240ENST00000514055 KRTAP12-3P60328 96 aa3.09□□□□□ -1.91
CAST-240ENST00000514055 MT1GP13640 62 aa3.08□□□□□ -1.92
CAST-240ENST00000514055 MT1LQ93083 61 aa3.08□□□□□ -1.92
CAST-240ENST00000514055 AHNAKQ09666 5890 aaKnown RBP3.08□□□□□ -1.92
CAST-240ENST00000514055 PP632Q6XCG6 107 aa3.07□□□□□ -1.92
CAST-240ENST00000514055 KRTAP23-1A1A580 65 aa3.06□□□□□ -1.92
CAST-240ENST00000514055 KRTAP4-3Q9BYR4 195 aa3.06□□□□□ -1.92
CAST-240ENST00000514055 BRK1Q8WUW1 75 aa3.05□□□□□ -1.92
CAST-240ENST00000514055 MT1MQ8N339 61 aa3.04□□□□□ -1.92
CAST-240ENST00000514055 KRTAP20-2Q3LI61 65 aa3.01□□□□□ -1.93
CAST-240ENST00000514055 MUC5BQ9HC84 5762 aaPredicted RBP2.99□□□□□ -1.93
CAST-240ENST00000514055 KRTAP15-1Q3LI76 137 aa2.95□□□□□ -1.94
CAST-240ENST00000514055 MUC5ACP98088 5654 aa2.94□□□□□ -1.94
CAST-240ENST00000514055 SYNE1Q8NF91 8797 aaKnown RBP2.92□□□□□ -1.94
CAST-240ENST00000514055 PMAIP1Q13794 54 aa2.86□□□□□ -1.95
CAST-240ENST00000514055 LCE3CQ5T5A8 94 aa2.86□□□□□ -1.95
CAST-240ENST00000514055 KRTAP5-5Q701N2 237 aaPredicted RBP2.82□□□□□ -1.96
CAST-240ENST00000514055 KRTAP5-8O75690 187 aa2.81□□□□□ -1.96
CAST-240ENST00000514055 KRTAP12-4P60329 112 aa2.81□□□□□ -1.96
CAST-240ENST00000514055 PRO0628Q9UI54 55 aa2.79□□□□□ -1.96
CAST-240ENST00000514055 PRAC1Q96KF2 57 aa2.73□□□□□ -1.97
CAST-240ENST00000514055 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.71□□□□□ -1.98
CAST-240ENST00000514055 KRTAP9-6A8MVA2 160 aa2.68□□□□□ -1.98
CAST-240ENST00000514055 KRTAP5-2Q701N4 177 aa2.68□□□□□ -1.98
CAST-240ENST00000514055 OBSCNQ5VST9 7968 aa2.66□□□□□ -1.98
CAST-240ENST00000514055 KRTAP5-11Q6L8G4 156 aa2.64□□□□□ -1.99
CAST-240ENST00000514055 KTN1-AS1Q86SY8 53 aa2.64□□□□□ -1.99
CAST-240ENST00000514055 MT1AP04731 61 aa2.63□□□□□ -1.99
CAST-240ENST00000514055 KRTAP6-1Q3LI64 71 aa2.6□□□□□ -1.99
CAST-240ENST00000514055 SVIPQ8NHG7 77 aa2.53□□□□□ -2
CAST-240ENST00000514055 KRTAP6-2Q3LI66 62 aa2.5□□□□□ -2.01
CAST-240ENST00000514055 KRTAP5-1Q6L8H4 278 aa2.5□□□□□ -2.01
CAST-240ENST00000514055 LCE1EQ5T753 118 aa2.47□□□□□ -2.01
CAST-240ENST00000514055 MT3P25713 68 aa2.39□□□□□ -2.03
CAST-240ENST00000514055 LUZP6Q538Z0 58 aa2.28□□□□□ -2.04
CAST-240ENST00000514055 KRTAP4-4Q9BYR3 166 aa2.26□□□□□ -2.05
CAST-240ENST00000514055 LCE1BQ5T7P3 118 aa2.15□□□□□ -2.07
CAST-240ENST00000514055 LCE3DQ9BYE3 92 aa2.1□□□□□ -2.07
CAST-240ENST00000514055 LCE1CQ5T751 118 aa2.02□□□□□ -2.09
CAST-240ENST00000514055 PHGR1C9JFL3 82 aa2.01□□□□□ -2.09
CAST-240ENST00000514055 LCE3EQ5T5B0 92 aa2□□□□□ -2.09
CAST-240ENST00000514055 NDUFAF8A1L188 74 aa1.98□□□□□ -2.09
CAST-240ENST00000514055 LCE1FQ5T754 118 aa1.95□□□□□ -2.1
CAST-240ENST00000514055 KRTAP21-2Q3LI59 83 aa1.7□□□□□ -2.14
CAST-240ENST00000514055 MUC19Q7Z5P9 8384 aa1.69□□□□□ -2.14
CAST-240ENST00000514055 A0A0A0MQY5 61 aa1.65□□□□□ -2.15
CAST-240ENST00000514055 INE1O15225 51 aa1.62□□□□□ -2.15
CAST-240ENST00000514055 PRM1P04553 51 aa1.6□□□□□ -2.15
CAST-240ENST00000514055 KRTAP21-1Q3LI58 79 aa1.51□□□□□ -2.17
CAST-240ENST00000514055 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 178 ms