RNA–Protein interactions for RNA: ENST00000513996.5

HERC4-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HERC4, Length 944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-214ENST00000513996 KRTAP10-12P60413 245 aa3.48□□□□□ -1.85
HERC4-214ENST00000513996 MT3P25713 68 aa3.47□□□□□ -1.85
HERC4-214ENST00000513996 KRTAP2-3P0C7H8 128 aa3.46□□□□□ -1.86
HERC4-214ENST00000513996 KRTAP2-4Q9BYR9 128 aa3.46□□□□□ -1.86
HERC4-214ENST00000513996 A0A1B0GU33 70 aa3.45□□□□□ -1.86
HERC4-214ENST00000513996 PRO0628Q9UI54 55 aa3.45□□□□□ -1.86
HERC4-214ENST00000513996 UQCR11O14957 56 aa3.43□□□□□ -1.86
HERC4-214ENST00000513996 SPATA8Q6RVD6 105 aa3.39□□□□□ -1.87
HERC4-214ENST00000513996 A6NED7 52 aa3.38□□□□□ -1.87
HERC4-214ENST00000513996 SPRR2DP22532 72 aa3.37□□□□□ -1.87
HERC4-214ENST00000513996 MIR22HGQ0VDD5 57 aa3.37□□□□□ -1.87
HERC4-214ENST00000513996 LCE1EQ5T753 118 aa3.36□□□□□ -1.87
HERC4-214ENST00000513996 CDC42SE1Q9NRR8 79 aa3.36□□□□□ -1.87
HERC4-214ENST00000513996 KRTAP5-11Q6L8G4 156 aa3.35□□□□□ -1.87
HERC4-214ENST00000513996 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.35□□□□□ -1.87
HERC4-214ENST00000513996 KRTAP2-1Q9BYU5 128 aa3.35□□□□□ -1.87
HERC4-214ENST00000513996 A0A0D9SG42 100 aa3.34□□□□□ -1.87
HERC4-214ENST00000513996 KRTAP12-1P59990 96 aa3.3□□□□□ -1.88
HERC4-214ENST00000513996 KRTAP19-7Q3SYF9 63 aa3.3□□□□□ -1.88
HERC4-214ENST00000513996 BRK1Q8WUW1 75 aa3.29□□□□□ -1.88
HERC4-214ENST00000513996 SPINT4Q6UDR6 99 aa3.28□□□□□ -1.88
HERC4-214ENST00000513996 A8MU10 97 aa3.27□□□□□ -1.89
HERC4-214ENST00000513996 LCE1FQ5T754 118 aa3.27□□□□□ -1.89
HERC4-214ENST00000513996 K7ERS5 55 aa3.26□□□□□ -1.89
HERC4-214ENST00000513996 MT1EP04732 61 aa3.25□□□□□ -1.89
HERC4-214ENST00000513996 LUZP6Q538Z0 58 aa3.21□□□□□ -1.9
HERC4-214ENST00000513996 KRTAP19-3Q7Z4W3 81 aa3.21□□□□□ -1.9
HERC4-214ENST00000513996 KRTAP19-5Q3LI72 72 aa3.2□□□□□ -1.9
HERC4-214ENST00000513996 C10orf95Q9H7T3 257 aa3.17□□□□□ -1.9
HERC4-214ENST00000513996 PMAIP1Q13794 54 aa3.16□□□□□ -1.9
HERC4-214ENST00000513996 MT1GP13640 62 aa3.14□□□□□ -1.91
HERC4-214ENST00000513996 LCE3AQ5TA76 89 aa3.13□□□□□ -1.91
HERC4-214ENST00000513996 MT1LQ93083 61 aa3.11□□□□□ -1.91
HERC4-214ENST00000513996 TNP1P09430 55 aa3.1□□□□□ -1.91
HERC4-214ENST00000513996 MT1MQ8N339 61 aa3.1□□□□□ -1.91
HERC4-214ENST00000513996 ROMO1P60602 79 aa3.09□□□□□ -1.91
HERC4-214ENST00000513996 DSTQ03001 7570 aaKnown RBP3.07□□□□□ -1.92
HERC4-214ENST00000513996 PP632Q6XCG6 107 aa3.06□□□□□ -1.92
HERC4-214ENST00000513996 KRTAP4-3Q9BYR4 195 aa3.06□□□□□ -1.92
HERC4-214ENST00000513996 KRTAP25-1Q3LHN0 102 aa3.04□□□□□ -1.92
HERC4-214ENST00000513996 LCE3CQ5T5A8 94 aa3.02□□□□□ -1.93
HERC4-214ENST00000513996 KTN1-AS1Q86SY8 53 aa3□□□□□ -1.93
HERC4-214ENST00000513996 KRTAP12-3P60328 96 aa2.99□□□□□ -1.93
HERC4-214ENST00000513996 MT4P47944 62 aa2.96□□□□□ -1.94
HERC4-214ENST00000513996 KRTAP5-4Q6L8H1 288 aa2.96□□□□□ -1.94
HERC4-214ENST00000513996 KRTAP9-6A8MVA2 160 aa2.92□□□□□ -1.94
HERC4-214ENST00000513996 HMCN1Q96RW7 5635 aa2.9□□□□□ -1.94
HERC4-214ENST00000513996 GPR98Q8WXG9 6306 aa2.88□□□□□ -1.95
HERC4-214ENST00000513996 KRTAP5-1Q6L8H4 278 aa2.88□□□□□ -1.95
HERC4-214ENST00000513996 KRTAP5-5Q701N2 237 aaPredicted RBP2.85□□□□□ -1.95
HERC4-214ENST00000513996 AHNAK2Q8IVF2 5795 aa2.83□□□□□ -1.96
HERC4-214ENST00000513996 KRTAP5-10Q6L8G5 202 aa2.79□□□□□ -1.96
HERC4-214ENST00000513996 KRTAP20-2Q3LI61 65 aa2.78□□□□□ -1.96
HERC4-214ENST00000513996 LCE3EQ5T5B0 92 aa2.76□□□□□ -1.97
HERC4-214ENST00000513996 SPRR5A0A1B0GTR4 108 aa2.75□□□□□ -1.97
HERC4-214ENST00000513996 KRTAP4-4Q9BYR3 166 aa2.74□□□□□ -1.97
HERC4-214ENST00000513996 SYNE1Q8NF91 8797 aaKnown RBP2.74□□□□□ -1.97
HERC4-214ENST00000513996 KRTAP12-4P60329 112 aa2.73□□□□□ -1.97
HERC4-214ENST00000513996 KRTAP5-7Q6L8G8 165 aa2.67□□□□□ -1.98
HERC4-214ENST00000513996 KRTAP6-1Q3LI64 71 aa2.65□□□□□ -1.99
HERC4-214ENST00000513996 MT1AP04731 61 aa2.64□□□□□ -1.99
HERC4-214ENST00000513996 OBSCNQ5VST9 7968 aa2.6□□□□□ -1.99
HERC4-214ENST00000513996 KRTAP5-2Q701N4 177 aa2.59□□□□□ -1.99
HERC4-214ENST00000513996 KRTAP6-2Q3LI66 62 aa2.51□□□□□ -2.01
HERC4-214ENST00000513996 KRTAP5-8O75690 187 aa2.47□□□□□ -2.01
HERC4-214ENST00000513996 LCE3DQ9BYE3 92 aa2.29□□□□□ -2.04
HERC4-214ENST00000513996 MUC5BQ9HC84 5762 aaPredicted RBP2.29□□□□□ -2.04
HERC4-214ENST00000513996 AHNAKQ09666 5890 aaKnown RBP2.28□□□□□ -2.04
HERC4-214ENST00000513996 MUC5ACP98088 5654 aa2.27□□□□□ -2.05
HERC4-214ENST00000513996 INE1O15225 51 aa2.19□□□□□ -2.06
HERC4-214ENST00000513996 LCE1CQ5T751 118 aa2.19□□□□□ -2.06
HERC4-214ENST00000513996 LCE1BQ5T7P3 118 aa2.19□□□□□ -2.06
HERC4-214ENST00000513996 MUC19Q7Z5P9 8384 aa1.83□□□□□ -2.12
HERC4-214ENST00000513996 KRTAP21-2Q3LI59 83 aa1.75□□□□□ -2.13
HERC4-214ENST00000513996 PHGR1C9JFL3 82 aa1.61□□□□□ -2.15
HERC4-214ENST00000513996 PRM1P04553 51 aa1.57□□□□□ -2.16
HERC4-214ENST00000513996 KRTAP21-1Q3LI58 79 aa1.21□□□□□ -2.22
HERC4-214ENST00000513996 MUC16Q8WXI7 14507 aa1.1□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 49.2 ms