RNA–Protein interactions for RNA: ENST00000513666.5

CAST-239, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 1,539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-239ENST00000513666 COX7CP15954 63 aa3.44□□□□□ -1.86
CAST-239ENST00000513666 MT4P47944 62 aa3.44□□□□□ -1.86
CAST-239ENST00000513666 A6NED7 52 aa3.42□□□□□ -1.86
CAST-239ENST00000513666 KRTAP9-6A8MVA2 160 aa3.42□□□□□ -1.86
CAST-239ENST00000513666 P0C880 135 aa3.41□□□□□ -1.86
CAST-239ENST00000513666 LCE1FQ5T754 118 aa3.41□□□□□ -1.86
CAST-239ENST00000513666 KRTAP5-7Q6L8G8 165 aa3.41□□□□□ -1.86
CAST-239ENST00000513666 KRTAP19-3Q7Z4W3 81 aa3.41□□□□□ -1.86
CAST-239ENST00000513666 ATP5EP56381 51 aaPredicted RBP3.4□□□□□ -1.86
CAST-239ENST00000513666 C20orf197Q8N268 126 aa3.4□□□□□ -1.86
CAST-239ENST00000513666 H0Y9P7 68 aa3.38□□□□□ -1.87
CAST-239ENST00000513666 KRTAP19-7Q3SYF9 63 aa3.37□□□□□ -1.87
CAST-239ENST00000513666 MT1EP04732 61 aa3.36□□□□□ -1.87
CAST-239ENST00000513666 CYSTM1Q9H1C7 97 aa3.36□□□□□ -1.87
CAST-239ENST00000513666 TRAV7A0A075B6U4 112 aa3.34□□□□□ -1.87
CAST-239ENST00000513666 LINC00208Q96KT6 92 aa3.33□□□□□ -1.88
CAST-239ENST00000513666 SPANXA2-OT1Q8N9U9 137 aa3.29□□□□□ -1.88
CAST-239ENST00000513666 MT1GP13640 62 aa3.29□□□□□ -1.88
CAST-239ENST00000513666 SERP2Q8N6R1 65 aa3.29□□□□□ -1.88
CAST-239ENST00000513666 NDUFAF8A1L188 74 aa3.28□□□□□ -1.88
CAST-239ENST00000513666 Q1T7F1 81 aa3.28□□□□□ -1.88
CAST-239ENST00000513666 SPRR5A0A1B0GTR4 108 aa3.27□□□□□ -1.89
CAST-239ENST00000513666 ROMO1P60602 79 aa3.27□□□□□ -1.89
CAST-239ENST00000513666 PP632Q6XCG6 107 aa3.26□□□□□ -1.89
CAST-239ENST00000513666 DMAC1Q96GE9 116 aa3.25□□□□□ -1.89
CAST-239ENST00000513666 ACYP2P14621 99 aa3.23□□□□□ -1.89
CAST-239ENST00000513666 MT1MQ8N339 61 aa3.23□□□□□ -1.89
CAST-239ENST00000513666 SPTSSBQ8NFR3 76 aa3.22□□□□□ -1.89
CAST-239ENST00000513666 LCE3CQ5T5A8 94 aa3.19□□□□□ -1.9
CAST-239ENST00000513666 KRTAP19-5Q3LI72 72 aa3.18□□□□□ -1.9
CAST-239ENST00000513666 A0A1B0GU33 70 aa3.16□□□□□ -1.9
CAST-239ENST00000513666 KRTAP4-3Q9BYR4 195 aa3.16□□□□□ -1.9
CAST-239ENST00000513666 SNURFQ9Y675 71 aa3.16□□□□□ -1.9
CAST-239ENST00000513666 CHKB-CPT1BH3BT56 60 aa3.15□□□□□ -1.9
CAST-239ENST00000513666 CDC42SE1Q9NRR8 79 aa3.15□□□□□ -1.9
CAST-239ENST00000513666 H7BZZ5 65 aa3.14□□□□□ -1.91
CAST-239ENST00000513666 MIR22HGQ0VDD5 57 aa3.14□□□□□ -1.91
CAST-239ENST00000513666 KRTAP20-2Q3LI61 65 aa3.14□□□□□ -1.91
CAST-239ENST00000513666 MT1LQ93083 61 aa3.14□□□□□ -1.91
CAST-239ENST00000513666 A0A0D9SG42 100 aa3.11□□□□□ -1.91
CAST-239ENST00000513666 AHNAKQ09666 5890 aaKnown RBP3.1□□□□□ -1.91
CAST-239ENST00000513666 KRTAP25-1Q3LHN0 102 aa3.08□□□□□ -1.92
CAST-239ENST00000513666 COA5Q86WW8 74 aa3.06□□□□□ -1.92
CAST-239ENST00000513666 KRTAP13-4Q3LI77 160 aa3.03□□□□□ -1.92
CAST-239ENST00000513666 SPINT4Q6UDR6 99 aa3.03□□□□□ -1.92
CAST-239ENST00000513666 KRTAP5-2Q701N4 177 aa3.03□□□□□ -1.92
CAST-239ENST00000513666 MUC5ACP98088 5654 aa3.02□□□□□ -1.93
CAST-239ENST00000513666 KRTAP12-4P60329 112 aa3.01□□□□□ -1.93
CAST-239ENST00000513666 KRTAP5-5Q701N2 237 aaPredicted RBP3□□□□□ -1.93
CAST-239ENST00000513666 MUC5BQ9HC84 5762 aaPredicted RBP2.99□□□□□ -1.93
CAST-239ENST00000513666 SYNE1Q8NF91 8797 aaKnown RBP2.98□□□□□ -1.93
CAST-239ENST00000513666 OBSCNQ5VST9 7968 aa2.97□□□□□ -1.93
CAST-239ENST00000513666 PRR15LQ9BU68 103 aa2.97□□□□□ -1.93
CAST-239ENST00000513666 C10orf95Q9H7T3 257 aa2.96□□□□□ -1.94
CAST-239ENST00000513666 A0A1B0GU69 56 aa2.94□□□□□ -1.94
CAST-239ENST00000513666 A8MU10 97 aa2.94□□□□□ -1.94
CAST-239ENST00000513666 LCE3AQ5TA76 89 aa2.92□□□□□ -1.94
CAST-239ENST00000513666 LCE3EQ5T5B0 92 aa2.9□□□□□ -1.95
CAST-239ENST00000513666 LINC01558Q9Y6Z2 57 aa2.9□□□□□ -1.95
CAST-239ENST00000513666 KRTAP5-8O75690 187 aa2.88□□□□□ -1.95
CAST-239ENST00000513666 UQCR11O14957 56 aa2.84□□□□□ -1.95
CAST-239ENST00000513666 KRTAP12-1P59990 96 aa2.83□□□□□ -1.96
CAST-239ENST00000513666 KRTAP12-3P60328 96 aa2.8□□□□□ -1.96
CAST-239ENST00000513666 SPATA8Q6RVD6 105 aa2.8□□□□□ -1.96
CAST-239ENST00000513666 TNP1P09430 55 aa2.79□□□□□ -1.96
CAST-239ENST00000513666 INE1O15225 51 aa2.71□□□□□ -1.98
CAST-239ENST00000513666 KRTAP6-1Q3LI64 71 aa2.68□□□□□ -1.98
CAST-239ENST00000513666 MT1AP04731 61 aa2.68□□□□□ -1.98
CAST-239ENST00000513666 KRTAP6-2Q3LI66 62 aa2.63□□□□□ -1.99
CAST-239ENST00000513666 LCE1CQ5T751 118 aa2.55□□□□□ -2
CAST-239ENST00000513666 LCE1BQ5T7P3 118 aa2.55□□□□□ -2
CAST-239ENST00000513666 LCE3DQ9BYE3 92 aa2.27□□□□□ -2.05
CAST-239ENST00000513666 MUC19Q7Z5P9 8384 aa2.08□□□□□ -2.08
CAST-239ENST00000513666 PHGR1C9JFL3 82 aa2.04□□□□□ -2.08
CAST-239ENST00000513666 KRTAP21-2Q3LI59 83 aa1.83□□□□□ -2.12
CAST-239ENST00000513666 KRTAP21-1Q3LI58 79 aa1.56□□□□□ -2.16
CAST-239ENST00000513666 MUC16Q8WXI7 14507 aa1.28□□□□□ -2.2
CAST-239ENST00000513666 PRM1P04553 51 aa1.25□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 147.7 ms