RNA–Protein interactions for RNA: ENST00000513436.6

SERF1A-209, Transcript of small EDRK-rich factor 1A, humanhuman

TSL 3 BASIC

Gene SERF1A, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-209ENST00000513436 MDN1Q9NU22 5596 aa5.1□□□□□ -1.59
SERF1A-209ENST00000513436 MT1XP80297 61 aa5.08□□□□□ -1.6
SERF1A-209ENST00000513436 SPRR2FQ96RM1 72 aa5.07□□□□□ -1.6
SERF1A-209ENST00000513436 KRTAP4-7Q9BYR0 210 aa5.05□□□□□ -1.6
SERF1A-209ENST00000513436 KRTAP8-1Q8IUC2 63 aa5.03□□□□□ -1.6
SERF1A-209ENST00000513436 LCE1DQ5T752 114 aa5.02□□□□□ -1.61
SERF1A-209ENST00000513436 SPRR2EP22531 72 aa5.01□□□□□ -1.61
SERF1A-209ENST00000513436 SPRR2BP35325 72 aa5.01□□□□□ -1.61
SERF1A-209ENST00000513436 SPRR2AP35326 72 aa5.01□□□□□ -1.61
SERF1A-209ENST00000513436 KRTAP2-3P0C7H8 128 aa4.99□□□□□ -1.61
SERF1A-209ENST00000513436 KRTAP2-4Q9BYR9 128 aa4.99□□□□□ -1.61
SERF1A-209ENST00000513436 C10orf95Q9H7T3 257 aa4.94□□□□□ -1.62
SERF1A-209ENST00000513436 KRTAP4-9Q9BYQ8 210 aa4.9□□□□□ -1.62
SERF1A-209ENST00000513436 LCE1AQ5T7P2 110 aa4.89□□□□□ -1.63
SERF1A-209ENST00000513436 KRTAP10-7P60409 375 aaPredicted RBP4.87□□□□□ -1.63
SERF1A-209ENST00000513436 KRTAP4-2Q9BYR5 136 aa4.86□□□□□ -1.63
SERF1A-209ENST00000513436 SPRR2DP22532 72 aa4.85□□□□□ -1.63
SERF1A-209ENST00000513436 KRTAP10-12P60413 245 aa4.84□□□□□ -1.63
SERF1A-209ENST00000513436 KRTAP2-2Q9BYT5 123 aa4.83□□□□□ -1.64
SERF1A-209ENST00000513436 KRTAP2-1Q9BYU5 128 aa4.83□□□□□ -1.64
SERF1A-209ENST00000513436 LCE4AQ5TA78 99 aa4.72□□□□□ -1.65
SERF1A-209ENST00000513436 KRTAP4-11Q9BYQ6 195 aa4.7□□□□□ -1.66
SERF1A-209ENST00000513436 TNP1P09430 55 aa4.64□□□□□ -1.67
SERF1A-209ENST00000513436 MT3P25713 68 aa4.63□□□□□ -1.67
SERF1A-209ENST00000513436 INE1O15225 51 aa4.61□□□□□ -1.67
SERF1A-209ENST00000513436 PP632Q6XCG6 107 aa4.58□□□□□ -1.68
SERF1A-209ENST00000513436 KRTAP19-7Q3SYF9 63 aa4.54□□□□□ -1.68
SERF1A-209ENST00000513436 MT1EP04732 61 aa4.52□□□□□ -1.69
SERF1A-209ENST00000513436 LCE3AQ5TA76 89 aa4.52□□□□□ -1.69
SERF1A-209ENST00000513436 KRTAP19-3Q7Z4W3 81 aa4.51□□□□□ -1.69
SERF1A-209ENST00000513436 DSTQ03001 7570 aaKnown RBP4.51□□□□□ -1.69
SERF1A-209ENST00000513436 LCE1FQ5T754 118 aa4.46□□□□□ -1.7
SERF1A-209ENST00000513436 KRTAP19-5Q3LI72 72 aa4.45□□□□□ -1.7
SERF1A-209ENST00000513436 KRTAP5-3Q6L8H2 238 aa4.44□□□□□ -1.7
SERF1A-209ENST00000513436 MT1GP13640 62 aa4.42□□□□□ -1.7
SERF1A-209ENST00000513436 MT1LQ93083 61 aa4.32□□□□□ -1.72
SERF1A-209ENST00000513436 MT1MQ8N339 61 aa4.31□□□□□ -1.72
SERF1A-209ENST00000513436 KRTAP12-3P60328 96 aa4.29□□□□□ -1.72
SERF1A-209ENST00000513436 GPR98Q8WXG9 6306 aa4.27□□□□□ -1.73
SERF1A-209ENST00000513436 SPRR5A0A1B0GTR4 108 aa4.26□□□□□ -1.73
SERF1A-209ENST00000513436 MT4P47944 62 aa4.25□□□□□ -1.73
SERF1A-209ENST00000513436 KRTAP4-3Q9BYR4 195 aa4.22□□□□□ -1.73
SERF1A-209ENST00000513436 HMCN1Q96RW7 5635 aa4.17□□□□□ -1.74
SERF1A-209ENST00000513436 KRTAP5-4Q6L8H1 288 aa4.12□□□□□ -1.75
SERF1A-209ENST00000513436 LCE3CQ5T5A8 94 aa4.07□□□□□ -1.76
SERF1A-209ENST00000513436 AHNAK2Q8IVF2 5795 aa4.04□□□□□ -1.76
SERF1A-209ENST00000513436 KRTAP5-10Q6L8G5 202 aa3.97□□□□□ -1.77
SERF1A-209ENST00000513436 KRTAP12-4P60329 112 aa3.94□□□□□ -1.78
SERF1A-209ENST00000513436 KRTAP20-2Q3LI61 65 aa3.92□□□□□ -1.78
SERF1A-209ENST00000513436 KRTAP5-5Q701N2 237 aaPredicted RBP3.92□□□□□ -1.78
SERF1A-209ENST00000513436 KRTAP9-6A8MVA2 160 aa3.91□□□□□ -1.78
SERF1A-209ENST00000513436 KRTAP5-7Q6L8G8 165 aa3.83□□□□□ -1.8
SERF1A-209ENST00000513436 SYNE1Q8NF91 8797 aaKnown RBP3.83□□□□□ -1.8
SERF1A-209ENST00000513436 LCE1EQ5T753 118 aa3.77□□□□□ -1.81
SERF1A-209ENST00000513436 LCE3EQ5T5B0 92 aa3.74□□□□□ -1.81
SERF1A-209ENST00000513436 MT1AP04731 61 aa3.68□□□□□ -1.82
SERF1A-209ENST00000513436 KRTAP6-1Q3LI64 71 aa3.65□□□□□ -1.82
SERF1A-209ENST00000513436 KRTAP5-2Q701N4 177 aa3.59□□□□□ -1.84
SERF1A-209ENST00000513436 KRTAP6-2Q3LI66 62 aa3.52□□□□□ -1.85
SERF1A-209ENST00000513436 OBSCNQ5VST9 7968 aa3.48□□□□□ -1.85
SERF1A-209ENST00000513436 KRTAP5-8O75690 187 aa3.46□□□□□ -1.86
SERF1A-209ENST00000513436 LCE3DQ9BYE3 92 aa3.43□□□□□ -1.86
SERF1A-209ENST00000513436 MUC5BQ9HC84 5762 aaPredicted RBP3.34□□□□□ -1.88
SERF1A-209ENST00000513436 AHNAKQ09666 5890 aaKnown RBP3.33□□□□□ -1.88
SERF1A-209ENST00000513436 MUC5ACP98088 5654 aa3.32□□□□□ -1.88
SERF1A-209ENST00000513436 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.29□□□□□ -1.88
SERF1A-209ENST00000513436 KRTAP5-1Q6L8H4 278 aa3.24□□□□□ -1.89
SERF1A-209ENST00000513436 KRTAP5-11Q6L8G4 156 aa3.19□□□□□ -1.9
SERF1A-209ENST00000513436 LCE1BQ5T7P3 118 aa2.98□□□□□ -1.93
SERF1A-209ENST00000513436 LCE1CQ5T751 118 aa2.88□□□□□ -1.95
SERF1A-209ENST00000513436 KRTAP4-4Q9BYR3 166 aa2.76□□□□□ -1.97
SERF1A-209ENST00000513436 PRM1P04553 51 aa2.7□□□□□ -1.98
SERF1A-209ENST00000513436 KRTAP21-2Q3LI59 83 aa2.38□□□□□ -2.03
SERF1A-209ENST00000513436 PHGR1C9JFL3 82 aa2.36□□□□□ -2.03
SERF1A-209ENST00000513436 MUC19Q7Z5P9 8384 aa2.15□□□□□ -2.07
SERF1A-209ENST00000513436 KRTAP21-1Q3LI58 79 aa1.79□□□□□ -2.12
SERF1A-209ENST00000513436 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 41.4 ms