RNA–Protein interactions for RNA: ENST00000513263.1

SKP2-207, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2

Gene SKP2, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-207ENST00000513263 PRR15LQ9BU68 103 aa3.99□□□□□ -1.77
SKP2-207ENST00000513263 LCE1DQ5T752 114 aa3.97□□□□□ -1.77
SKP2-207ENST00000513263 SPINT4Q6UDR6 99 aa3.96□□□□□ -1.78
SKP2-207ENST00000513263 LINC01558Q9Y6Z2 57 aa3.96□□□□□ -1.78
SKP2-207ENST00000513263 A0A1B0GU33 70 aa3.95□□□□□ -1.78
SKP2-207ENST00000513263 KRTAP19-5Q3LI72 72 aa3.95□□□□□ -1.78
SKP2-207ENST00000513263 Q1T7F1 81 aa3.94□□□□□ -1.78
SKP2-207ENST00000513263 SPATA8Q6RVD6 105 aa3.92□□□□□ -1.78
SKP2-207ENST00000513263 MT1MQ8N339 61 aa3.92□□□□□ -1.78
SKP2-207ENST00000513263 KRTAP12-1P59990 96 aa3.9□□□□□ -1.79
SKP2-207ENST00000513263 AHNAK2Q8IVF2 5795 aa3.89□□□□□ -1.79
SKP2-207ENST00000513263 MT4P47944 62 aa3.89□□□□□ -1.79
SKP2-207ENST00000513263 MT1LQ93083 61 aa3.88□□□□□ -1.79
SKP2-207ENST00000513263 TNP1P09430 55 aa3.85□□□□□ -1.79
SKP2-207ENST00000513263 UQCR11O14957 56 aa3.84□□□□□ -1.79
SKP2-207ENST00000513263 KRTAP5-4Q6L8H1 288 aa3.84□□□□□ -1.79
SKP2-207ENST00000513263 C10orf95Q9H7T3 257 aa3.82□□□□□ -1.8
SKP2-207ENST00000513263 KRTAP5-10Q6L8G5 202 aa3.79□□□□□ -1.8
SKP2-207ENST00000513263 A6NED7 52 aa3.78□□□□□ -1.8
SKP2-207ENST00000513263 MIR22HGQ0VDD5 57 aa3.78□□□□□ -1.8
SKP2-207ENST00000513263 LCE3AQ5TA76 89 aa3.78□□□□□ -1.8
SKP2-207ENST00000513263 CDC42SE1Q9NRR8 79 aa3.77□□□□□ -1.81
SKP2-207ENST00000513263 A8MU10 97 aa3.75□□□□□ -1.81
SKP2-207ENST00000513263 KRTAP4-6Q9BYQ5 205 aa3.73□□□□□ -1.81
SKP2-207ENST00000513263 KRTAP4-3Q9BYR4 195 aa3.71□□□□□ -1.82
SKP2-207ENST00000513263 K7ERS5 55 aa3.7□□□□□ -1.82
SKP2-207ENST00000513263 KRTAP12-3P60328 96 aa3.7□□□□□ -1.82
SKP2-207ENST00000513263 KRTAP5-7Q6L8G8 165 aa3.69□□□□□ -1.82
SKP2-207ENST00000513263 ROMO1P60602 79 aa3.66□□□□□ -1.82
SKP2-207ENST00000513263 KRTAP5-3Q6L8H2 238 aa3.66□□□□□ -1.82
SKP2-207ENST00000513263 PRAC1Q96KF2 57 aa3.66□□□□□ -1.82
SKP2-207ENST00000513263 SPRR5A0A1B0GTR4 108 aa3.65□□□□□ -1.83
SKP2-207ENST00000513263 KRTAP12-4P60329 112 aa3.63□□□□□ -1.83
SKP2-207ENST00000513263 KRTAP20-2Q3LI61 65 aa3.63□□□□□ -1.83
SKP2-207ENST00000513263 KRTAP19-4Q3LI73 84 aa3.62□□□□□ -1.83
SKP2-207ENST00000513263 LUZP6Q538Z0 58 aa3.61□□□□□ -1.83
SKP2-207ENST00000513263 KRTAP5-5Q701N2 237 aaPredicted RBP3.61□□□□□ -1.83
SKP2-207ENST00000513263 KRTAP4-7Q9BYR0 210 aa3.58□□□□□ -1.84
SKP2-207ENST00000513263 KRTAP25-1Q3LHN0 102 aa3.57□□□□□ -1.84
SKP2-207ENST00000513263 KRTAP23-1A1A580 65 aa3.53□□□□□ -1.84
SKP2-207ENST00000513263 SYNE1Q8NF91 8797 aaKnown RBP3.5□□□□□ -1.85
SKP2-207ENST00000513263 LOC100996750A0A140TA64 210 aa3.42□□□□□ -1.86
SKP2-207ENST00000513263 NDUFAF8A1L188 74 aa3.39□□□□□ -1.87
SKP2-207ENST00000513263 KRTAP15-1Q3LI76 137 aa3.39□□□□□ -1.87
SKP2-207ENST00000513263 LCE3CQ5T5A8 94 aa3.37□□□□□ -1.87
SKP2-207ENST00000513263 KRTAP4-11Q9BYQ6 195 aa3.37□□□□□ -1.87
SKP2-207ENST00000513263 KRTAP5-2Q701N4 177 aa3.34□□□□□ -1.87
SKP2-207ENST00000513263 MT1AP04731 61 aa3.33□□□□□ -1.88
SKP2-207ENST00000513263 AHNAKQ09666 5890 aaKnown RBP3.27□□□□□ -1.89
SKP2-207ENST00000513263 KRTAP6-1Q3LI64 71 aa3.26□□□□□ -1.89
SKP2-207ENST00000513263 MUC5BQ9HC84 5762 aaPredicted RBP3.26□□□□□ -1.89
SKP2-207ENST00000513263 KRTAP5-8O75690 187 aa3.24□□□□□ -1.89
SKP2-207ENST00000513263 MUC5ACP98088 5654 aa3.24□□□□□ -1.89
SKP2-207ENST00000513263 KRTAP9-4Q9BYQ2 154 aa3.21□□□□□ -1.9
SKP2-207ENST00000513263 OBSCNQ5VST9 7968 aa3.18□□□□□ -1.9
SKP2-207ENST00000513263 KRTAP6-2Q3LI66 62 aa3.17□□□□□ -1.9
SKP2-207ENST00000513263 KRTAP9-9Q9BYP9 154 aa3.16□□□□□ -1.9
SKP2-207ENST00000513263 KRTAP9-6A8MVA2 160 aa3.09□□□□□ -1.91
SKP2-207ENST00000513263 MT3P25713 68 aa3.08□□□□□ -1.92
SKP2-207ENST00000513263 KRTAP5-1Q6L8H4 278 aa3□□□□□ -1.93
SKP2-207ENST00000513263 INE1O15225 51 aa2.92□□□□□ -1.94
SKP2-207ENST00000513263 LCE1EQ5T753 118 aa2.89□□□□□ -1.95
SKP2-207ENST00000513263 LCE1CQ5T751 118 aa2.67□□□□□ -1.98
SKP2-207ENST00000513263 LCE1BQ5T7P3 118 aa2.67□□□□□ -1.98
SKP2-207ENST00000513263 KRTAP4-2Q9BYR5 136 aa2.67□□□□□ -1.98
SKP2-207ENST00000513263 KRTAP4-12Q9BQ66 201 aa2.46□□□□□ -2.02
SKP2-207ENST00000513263 LCE1FQ5T754 118 aa2.45□□□□□ -2.02
SKP2-207ENST00000513263 KRTAP5-11Q6L8G4 156 aa2.45□□□□□ -2.02
SKP2-207ENST00000513263 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.43□□□□□ -2.02
SKP2-207ENST00000513263 LCE3DQ9BYE3 92 aa2.42□□□□□ -2.02
SKP2-207ENST00000513263 LCE3EQ5T5B0 92 aa2.24□□□□□ -2.05
SKP2-207ENST00000513263 PHGR1C9JFL3 82 aa2.23□□□□□ -2.05
SKP2-207ENST00000513263 KRTAP21-2Q3LI59 83 aa2.16□□□□□ -2.06
SKP2-207ENST00000513263 MUC19Q7Z5P9 8384 aa2□□□□□ -2.09
SKP2-207ENST00000513263 KRTAP4-4Q9BYR3 166 aa1.94□□□□□ -2.1
SKP2-207ENST00000513263 PRM1P04553 51 aa1.78□□□□□ -2.12
SKP2-207ENST00000513263 KRTAP21-1Q3LI58 79 aa1.74□□□□□ -2.13
SKP2-207ENST00000513263 MUC16Q8WXI7 14507 aa1.38□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 99.8 ms