RNA–Protein interactions for RNA: ENST00000513048.5

DHFR-206, Transcript of dihydrofolate reductase, humanhuman

TSL 1 (best)

Gene DHFR, Length 994 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-206ENST00000513048 FCGBPQ9Y6R7 5405 aaPredicted RBP3.71□□□□□ -1.82
DHFR-206ENST00000513048 KRTAP2-2Q9BYT5 123 aa3.69□□□□□ -1.82
DHFR-206ENST00000513048 KTN1-AS1Q86SY8 53 aa3.67□□□□□ -1.82
DHFR-206ENST00000513048 KRTAP5-11Q6L8G4 156 aa3.65□□□□□ -1.83
DHFR-206ENST00000513048 PRAC1Q96KF2 57 aa3.64□□□□□ -1.83
DHFR-206ENST00000513048 LCE3AQ5TA76 89 aa3.61□□□□□ -1.83
DHFR-206ENST00000513048 LCE1EQ5T753 118 aa3.56□□□□□ -1.84
DHFR-206ENST00000513048 PP632Q6XCG6 107 aa3.55□□□□□ -1.84
DHFR-206ENST00000513048 KRTAP8-1Q8IUC2 63 aa3.55□□□□□ -1.84
DHFR-206ENST00000513048 MACF1Q9UPN3 7388 aaKnown RBP3.51□□□□□ -1.85
DHFR-206ENST00000513048 KMT2DO14686 5537 aa3.51□□□□□ -1.85
DHFR-206ENST00000513048 MT3P25713 68 aa3.5□□□□□ -1.85
DHFR-206ENST00000513048 KRTAP19-5Q3LI72 72 aa3.5□□□□□ -1.85
DHFR-206ENST00000513048 KRTAP19-7Q3SYF9 63 aa3.5□□□□□ -1.85
DHFR-206ENST00000513048 KRTAP12-3P60328 96 aa3.46□□□□□ -1.86
DHFR-206ENST00000513048 SYNE2Q8WXH0 6885 aaKnown RBP3.45□□□□□ -1.86
DHFR-206ENST00000513048 MT1EP04732 61 aa3.43□□□□□ -1.86
DHFR-206ENST00000513048 KRTAP5-9P26371 169 aa3.43□□□□□ -1.86
DHFR-206ENST00000513048 SVIPQ8NHG7 77 aa3.41□□□□□ -1.86
DHFR-206ENST00000513048 KRTAP6-3Q3LI67 103 aa3.39□□□□□ -1.87
DHFR-206ENST00000513048 SPRR2FQ96RM1 72 aa3.38□□□□□ -1.87
DHFR-206ENST00000513048 MT1LQ93083 61 aa3.35□□□□□ -1.87
DHFR-206ENST00000513048 KRTAP5-1Q6L8H4 278 aa3.3□□□□□ -1.88
DHFR-206ENST00000513048 KRTAP19-3Q7Z4W3 81 aa3.3□□□□□ -1.88
DHFR-206ENST00000513048 MUC12Q9UKN1 5478 aa3.29□□□□□ -1.88
DHFR-206ENST00000513048 MT1GP13640 62 aa3.25□□□□□ -1.89
DHFR-206ENST00000513048 LCE3CQ5T5A8 94 aa3.24□□□□□ -1.89
DHFR-206ENST00000513048 SPRR2EP22531 72 aa3.23□□□□□ -1.89
DHFR-206ENST00000513048 SPRR2BP35325 72 aa3.23□□□□□ -1.89
DHFR-206ENST00000513048 SPRR2AP35326 72 aa3.23□□□□□ -1.89
DHFR-206ENST00000513048 KRTAP5-4Q6L8H1 288 aa3.23□□□□□ -1.89
DHFR-206ENST00000513048 MT1MQ8N339 61 aa3.23□□□□□ -1.89
DHFR-206ENST00000513048 NEBP20929 6669 aa3.22□□□□□ -1.89
DHFR-206ENST00000513048 KRTAP4-4Q9BYR3 166 aa3.21□□□□□ -1.9
DHFR-206ENST00000513048 MDN1Q9NU22 5596 aa3.18□□□□□ -1.9
DHFR-206ENST00000513048 SPRR5A0A1B0GTR4 108 aa3.18□□□□□ -1.9
DHFR-206ENST00000513048 KRTAP4-3Q9BYR4 195 aa3.17□□□□□ -1.9
DHFR-206ENST00000513048 SPRR2DP22532 72 aa3.12□□□□□ -1.91
DHFR-206ENST00000513048 KRTAP9-6A8MVA2 160 aa3.1□□□□□ -1.91
DHFR-206ENST00000513048 LCE1FQ5T754 118 aa2.98□□□□□ -1.93
DHFR-206ENST00000513048 DSTQ03001 7570 aaKnown RBP2.98□□□□□ -1.93
DHFR-206ENST00000513048 KRTAP20-1Q3LI63 56 aa2.97□□□□□ -1.93
DHFR-206ENST00000513048 KRTAP2-3P0C7H8 128 aa2.96□□□□□ -1.94
DHFR-206ENST00000513048 KRTAP2-4Q9BYR9 128 aa2.96□□□□□ -1.94
DHFR-206ENST00000513048 KRTAP5-5Q701N2 237 aaPredicted RBP2.95□□□□□ -1.94
DHFR-206ENST00000513048 LUZP6Q538Z0 58 aa2.91□□□□□ -1.94
DHFR-206ENST00000513048 KRTAP2-1Q9BYU5 128 aa2.89□□□□□ -1.95
DHFR-206ENST00000513048 A0A0A0MQY5 61 aa2.87□□□□□ -1.95
DHFR-206ENST00000513048 MT1AP04731 61 aa2.85□□□□□ -1.95
DHFR-206ENST00000513048 NDUFAF8A1L188 74 aa2.82□□□□□ -1.96
DHFR-206ENST00000513048 KRTAP6-1Q3LI64 71 aa2.82□□□□□ -1.96
DHFR-206ENST00000513048 KRTAP5-2Q701N4 177 aa2.76□□□□□ -1.97
DHFR-206ENST00000513048 OBSCNQ5VST9 7968 aa2.75□□□□□ -1.97
DHFR-206ENST00000513048 SYNE1Q8NF91 8797 aaKnown RBP2.71□□□□□ -1.98
DHFR-206ENST00000513048 MT4P47944 62 aa2.7□□□□□ -1.98
DHFR-206ENST00000513048 KRTAP12-4P60329 112 aa2.69□□□□□ -1.98
DHFR-206ENST00000513048 KRTAP20-2Q3LI61 65 aa2.65□□□□□ -1.99
DHFR-206ENST00000513048 HMCN1Q96RW7 5635 aa2.61□□□□□ -1.99
DHFR-206ENST00000513048 KRTAP6-2Q3LI66 62 aa2.6□□□□□ -1.99
DHFR-206ENST00000513048 LCE3EQ5T5B0 92 aa2.58□□□□□ -2
DHFR-206ENST00000513048 GPR98Q8WXG9 6306 aa2.49□□□□□ -2.01
DHFR-206ENST00000513048 LCE3DQ9BYE3 92 aa2.39□□□□□ -2.03
DHFR-206ENST00000513048 AHNAK2Q8IVF2 5795 aa2.37□□□□□ -2.03
DHFR-206ENST00000513048 KRTAP5-8O75690 187 aa2.37□□□□□ -2.03
DHFR-206ENST00000513048 INE1O15225 51 aa2.32□□□□□ -2.04
DHFR-206ENST00000513048 LCE1CQ5T751 118 aa2.32□□□□□ -2.04
DHFR-206ENST00000513048 LCE1BQ5T7P3 118 aa2.32□□□□□ -2.04
DHFR-206ENST00000513048 KRTAP5-10Q6L8G5 202 aa2.31□□□□□ -2.04
DHFR-206ENST00000513048 KRTAP5-7Q6L8G8 165 aa2.25□□□□□ -2.05
DHFR-206ENST00000513048 MUC5ACP98088 5654 aa2.11□□□□□ -2.07
DHFR-206ENST00000513048 PRM1P04553 51 aa1.99□□□□□ -2.09
DHFR-206ENST00000513048 MUC5BQ9HC84 5762 aaPredicted RBP1.94□□□□□ -2.1
DHFR-206ENST00000513048 AHNAKQ09666 5890 aaKnown RBP1.93□□□□□ -2.1
DHFR-206ENST00000513048 MUC19Q7Z5P9 8384 aa1.93□□□□□ -2.1
DHFR-206ENST00000513048 KRTAP21-2Q3LI59 83 aa1.86□□□□□ -2.11
DHFR-206ENST00000513048 PHGR1C9JFL3 82 aa1.61□□□□□ -2.15
DHFR-206ENST00000513048 KRTAP21-1Q3LI58 79 aa1.22□□□□□ -2.21
DHFR-206ENST00000513048 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 106.6 ms