RNA–Protein interactions for RNA: ENST00000512979.1

TRIO-220, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 292 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-220ENST00000512979 KRTAP5-11Q6L8G4 156 aa3.83□□□□□ -1.8
TRIO-220ENST00000512979 SNURFQ9Y675 71 aa3.83□□□□□ -1.8
TRIO-220ENST00000512979 SPRR5A0A1B0GTR4 108 aa3.79□□□□□ -1.8
TRIO-220ENST00000512979 KRTAP2-1Q9BYU5 128 aa3.79□□□□□ -1.8
TRIO-220ENST00000512979 A0A1B0GU33 70 aa3.78□□□□□ -1.8
TRIO-220ENST00000512979 SPRR2DP22532 72 aa3.78□□□□□ -1.8
TRIO-220ENST00000512979 SERP2Q8N6R1 65 aa3.77□□□□□ -1.81
TRIO-220ENST00000512979 SERP1Q9Y6X1 66 aa3.73□□□□□ -1.81
TRIO-220ENST00000512979 COA5Q86WW8 74 aa3.69□□□□□ -1.82
TRIO-220ENST00000512979 PMAIP1Q13794 54 aa3.67□□□□□ -1.82
TRIO-220ENST00000512979 COX7CP15954 63 aa3.64□□□□□ -1.83
TRIO-220ENST00000512979 A0A0D9SG42 100 aa3.63□□□□□ -1.83
TRIO-220ENST00000512979 LCE3DQ9BYE3 92 aa3.62□□□□□ -1.83
TRIO-220ENST00000512979 KRTAP13-4Q3LI77 160 aa3.61□□□□□ -1.83
TRIO-220ENST00000512979 SPATA8Q6RVD6 105 aa3.56□□□□□ -1.84
TRIO-220ENST00000512979 A0A1B0GU69 56 aa3.55□□□□□ -1.84
TRIO-220ENST00000512979 H7BZZ5 65 aa3.55□□□□□ -1.84
TRIO-220ENST00000512979 KRTAP19-7Q3SYF9 63 aa3.53□□□□□ -1.84
TRIO-220ENST00000512979 MT1EP04732 61 aa3.51□□□□□ -1.85
TRIO-220ENST00000512979 KRTAP19-3Q7Z4W3 81 aa3.5□□□□□ -1.85
TRIO-220ENST00000512979 PRR15LQ9BU68 103 aa3.5□□□□□ -1.85
TRIO-220ENST00000512979 CYSTM1Q9H1C7 97 aa3.5□□□□□ -1.85
TRIO-220ENST00000512979 GPR98Q8WXG9 6306 aa3.48□□□□□ -1.85
TRIO-220ENST00000512979 KRTAP12-1P59990 96 aa3.47□□□□□ -1.85
TRIO-220ENST00000512979 DSTQ03001 7570 aaKnown RBP3.46□□□□□ -1.85
TRIO-220ENST00000512979 ATP5EP56381 51 aaPredicted RBP3.46□□□□□ -1.86
TRIO-220ENST00000512979 KRTAP19-5Q3LI72 72 aa3.43□□□□□ -1.86
TRIO-220ENST00000512979 CCDC179H3BU77 68 aa3.4□□□□□ -1.87
TRIO-220ENST00000512979 TNP1P09430 55 aa3.4□□□□□ -1.87
TRIO-220ENST00000512979 MT1GP13640 62 aa3.4□□□□□ -1.87
TRIO-220ENST00000512979 PP632Q6XCG6 107 aa3.4□□□□□ -1.87
TRIO-220ENST00000512979 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.39□□□□□ -1.87
TRIO-220ENST00000512979 MT1MQ8N339 61 aa3.35□□□□□ -1.87
TRIO-220ENST00000512979 LCE3AQ5TA76 89 aa3.34□□□□□ -1.87
TRIO-220ENST00000512979 MT1LQ93083 61 aa3.34□□□□□ -1.87
TRIO-220ENST00000512979 LINC01558Q9Y6Z2 57 aa3.34□□□□□ -1.87
TRIO-220ENST00000512979 UQCR11O14957 56 aa3.33□□□□□ -1.88
TRIO-220ENST00000512979 MT4P47944 62 aa3.32□□□□□ -1.88
TRIO-220ENST00000512979 TMEM258P61165 79 aa3.32□□□□□ -1.88
TRIO-220ENST00000512979 HMCN1Q96RW7 5635 aa3.3□□□□□ -1.88
TRIO-220ENST00000512979 C10orf95Q9H7T3 257 aa3.3□□□□□ -1.88
TRIO-220ENST00000512979 KRTAP4-3Q9BYR4 195 aa3.28□□□□□ -1.88
TRIO-220ENST00000512979 KTN1-AS1Q86SY8 53 aa3.26□□□□□ -1.89
TRIO-220ENST00000512979 AHNAK2Q8IVF2 5795 aa3.25□□□□□ -1.89
TRIO-220ENST00000512979 MIR22HGQ0VDD5 57 aa3.24□□□□□ -1.89
TRIO-220ENST00000512979 KRTAP5-4Q6L8H1 288 aa3.24□□□□□ -1.89
TRIO-220ENST00000512979 KRTAP12-3P60328 96 aa3.21□□□□□ -1.9
TRIO-220ENST00000512979 KRTAP5-10Q6L8G5 202 aa3.17□□□□□ -1.9
TRIO-220ENST00000512979 KRTAP5-1Q6L8H4 278 aa3.14□□□□□ -1.91
TRIO-220ENST00000512979 Q1T7F1 81 aa3.11□□□□□ -1.91
TRIO-220ENST00000512979 KRTAP20-2Q3LI61 65 aa3.07□□□□□ -1.92
TRIO-220ENST00000512979 KRTAP5-5Q701N2 237 aaPredicted RBP3.07□□□□□ -1.92
TRIO-220ENST00000512979 KRTAP5-7Q6L8G8 165 aa3.06□□□□□ -1.92
TRIO-220ENST00000512979 CDC42SE1Q9NRR8 79 aa3.05□□□□□ -1.92
TRIO-220ENST00000512979 KRTAP12-4P60329 112 aa3.03□□□□□ -1.92
TRIO-220ENST00000512979 SYNE1Q8NF91 8797 aaKnown RBP3□□□□□ -1.93
TRIO-220ENST00000512979 RPS28P62857 69 aaKnown RBP2.99□□□□□ -1.93
TRIO-220ENST00000512979 ROMO1P60602 79 aa2.96□□□□□ -1.94
TRIO-220ENST00000512979 MT1AP04731 61 aa2.84□□□□□ -1.95
TRIO-220ENST00000512979 KRTAP6-1Q3LI64 71 aa2.83□□□□□ -1.96
TRIO-220ENST00000512979 KRTAP4-4Q9BYR3 166 aa2.83□□□□□ -1.96
TRIO-220ENST00000512979 LCE1CQ5T751 118 aa2.82□□□□□ -1.96
TRIO-220ENST00000512979 LCE1BQ5T7P3 118 aa2.82□□□□□ -1.96
TRIO-220ENST00000512979 KRTAP5-2Q701N4 177 aa2.82□□□□□ -1.96
TRIO-220ENST00000512979 OBSCNQ5VST9 7968 aa2.79□□□□□ -1.96
TRIO-220ENST00000512979 KRTAP5-8O75690 187 aa2.73□□□□□ -1.97
TRIO-220ENST00000512979 KRTAP6-2Q3LI66 62 aa2.72□□□□□ -1.97
TRIO-220ENST00000512979 AHNAKQ09666 5890 aaKnown RBP2.71□□□□□ -1.98
TRIO-220ENST00000512979 MUC5BQ9HC84 5762 aaPredicted RBP2.69□□□□□ -1.98
TRIO-220ENST00000512979 MUC5ACP98088 5654 aa2.66□□□□□ -1.98
TRIO-220ENST00000512979 BRK1Q8WUW1 75 aa2.62□□□□□ -1.99
TRIO-220ENST00000512979 INE1O15225 51 aa2.53□□□□□ -2
TRIO-220ENST00000512979 MUC19Q7Z5P9 8384 aa2.19□□□□□ -2.06
TRIO-220ENST00000512979 KRTAP21-2Q3LI59 83 aa1.96□□□□□ -2.1
TRIO-220ENST00000512979 PHGR1C9JFL3 82 aa1.86□□□□□ -2.11
TRIO-220ENST00000512979 PRM1P04553 51 aa1.49□□□□□ -2.17
TRIO-220ENST00000512979 KRTAP21-1Q3LI58 79 aa1.41□□□□□ -2.18
TRIO-220ENST00000512979 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 95.7 ms