RNA–Protein interactions for RNA: ENST00000512147.5

CLDND1-225, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-225ENST00000512147 RPS28P62857 69 aaKnown RBP2.64□□□□□ -1.99
CLDND1-225ENST00000512147 LINC01554Q52M75 96 aa2.64□□□□□ -1.99
CLDND1-225ENST00000512147 SMIM26A0A096LP01 95 aa2.62□□□□□ -1.99
CLDND1-225ENST00000512147 SPATA8Q6RVD6 105 aa2.62□□□□□ -1.99
CLDND1-225ENST00000512147 PRR15LQ9BU68 103 aa2.62□□□□□ -1.99
CLDND1-225ENST00000512147 Q1T7F1 81 aa2.61□□□□□ -1.99
CLDND1-225ENST00000512147 PLAC4Q8WY50 150 aa2.61□□□□□ -1.99
CLDND1-225ENST00000512147 KRTAP5-4Q6L8H1 288 aa2.6□□□□□ -1.99
CLDND1-225ENST00000512147 V9GYY9 64 aa2.6□□□□□ -1.99
CLDND1-225ENST00000512147 PRO2289Q9P1D8 64 aa2.59□□□□□ -1.99
CLDND1-225ENST00000512147 A0A0D9SG42 100 aa2.58□□□□□ -2
CLDND1-225ENST00000512147 PSPHP1O15172 72 aa2.58□□□□□ -2
CLDND1-225ENST00000512147 KRTAP12-2P59991 146 aa2.57□□□□□ -2
CLDND1-225ENST00000512147 A8MU10 97 aa2.56□□□□□ -2
CLDND1-225ENST00000512147 UQCR11O14957 56 aa2.56□□□□□ -2
CLDND1-225ENST00000512147 MT1XP80297 61 aa2.56□□□□□ -2
CLDND1-225ENST00000512147 KRTAP5-8O75690 187 aa2.55□□□□□ -2
CLDND1-225ENST00000512147 KRTAP12-1P59990 96 aa2.55□□□□□ -2
CLDND1-225ENST00000512147 KRTAP15-1Q3LI76 137 aa2.53□□□□□ -2
CLDND1-225ENST00000512147 SPINT4Q6UDR6 99 aa2.53□□□□□ -2
CLDND1-225ENST00000512147 MIR22HGQ0VDD5 57 aa2.52□□□□□ -2.01
CLDND1-225ENST00000512147 KRTAP20-2Q3LI61 65 aa2.51□□□□□ -2.01
CLDND1-225ENST00000512147 CAMK2N1Q7Z7J9 78 aa2.51□□□□□ -2.01
CLDND1-225ENST00000512147 A6NED7 52 aa2.49□□□□□ -2.01
CLDND1-225ENST00000512147 KRTAP10-7P60409 375 aaPredicted RBP2.45□□□□□ -2.02
CLDND1-225ENST00000512147 KRTAP10-12P60413 245 aa2.43□□□□□ -2.02
CLDND1-225ENST00000512147 C10orf95Q9H7T3 257 aa2.43□□□□□ -2.02
CLDND1-225ENST00000512147 K7ERS5 55 aa2.42□□□□□ -2.02
CLDND1-225ENST00000512147 CDC42SE1Q9NRR8 79 aa2.42□□□□□ -2.02
CLDND1-225ENST00000512147 KRTAP19-3Q7Z4W3 81 aa2.41□□□□□ -2.02
CLDND1-225ENST00000512147 PRAC1Q96KF2 57 aa2.41□□□□□ -2.02
CLDND1-225ENST00000512147 TNP1P09430 55 aa2.36□□□□□ -2.03
CLDND1-225ENST00000512147 SYNE1Q8NF91 8797 aaKnown RBP2.36□□□□□ -2.03
CLDND1-225ENST00000512147 KRTAP5-2Q701N4 177 aa2.35□□□□□ -2.03
CLDND1-225ENST00000512147 BRK1Q8WUW1 75 aa2.33□□□□□ -2.04
CLDND1-225ENST00000512147 KRTAP12-4P60329 112 aa2.32□□□□□ -2.04
CLDND1-225ENST00000512147 KRTAP25-1Q3LHN0 102 aa2.31□□□□□ -2.04
CLDND1-225ENST00000512147 ROMO1P60602 79 aa2.3□□□□□ -2.04
CLDND1-225ENST00000512147 LCE3AQ5TA76 89 aa2.3□□□□□ -2.04
CLDND1-225ENST00000512147 PP632Q6XCG6 107 aa2.3□□□□□ -2.04
CLDND1-225ENST00000512147 KRTAP19-7Q3SYF9 63 aa2.29□□□□□ -2.04
CLDND1-225ENST00000512147 OBSCNQ5VST9 7968 aa2.27□□□□□ -2.05
CLDND1-225ENST00000512147 MT1GP13640 62 aa2.27□□□□□ -2.05
CLDND1-225ENST00000512147 KRTAP19-5Q3LI72 72 aa2.27□□□□□ -2.05
CLDND1-225ENST00000512147 MT1EP04732 61 aa2.26□□□□□ -2.05
CLDND1-225ENST00000512147 KRTAP12-3P60328 96 aa2.21□□□□□ -2.06
CLDND1-225ENST00000512147 PMAIP1Q13794 54 aa2.21□□□□□ -2.06
CLDND1-225ENST00000512147 PRO0628Q9UI54 55 aa2.2□□□□□ -2.06
CLDND1-225ENST00000512147 MT1MQ8N339 61 aa2.19□□□□□ -2.06
CLDND1-225ENST00000512147 MT1LQ93083 61 aa2.19□□□□□ -2.06
CLDND1-225ENST00000512147 NDUFAF8A1L188 74 aa2.17□□□□□ -2.06
CLDND1-225ENST00000512147 KRTAP4-3Q9BYR4 195 aa2.16□□□□□ -2.06
CLDND1-225ENST00000512147 LCE3CQ5T5A8 94 aa2.06□□□□□ -2.08
CLDND1-225ENST00000512147 KRTAP5-5Q701N2 237 aaPredicted RBP2.06□□□□□ -2.08
CLDND1-225ENST00000512147 KRTAP5-1Q6L8H4 278 aa2.05□□□□□ -2.08
CLDND1-225ENST00000512147 KTN1-AS1Q86SY8 53 aa2.05□□□□□ -2.08
CLDND1-225ENST00000512147 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.04□□□□□ -2.08
CLDND1-225ENST00000512147 PHGR1C9JFL3 82 aa1.99□□□□□ -2.09
CLDND1-225ENST00000512147 MT3P25713 68 aa1.98□□□□□ -2.09
CLDND1-225ENST00000512147 KRTAP9-6A8MVA2 160 aa1.96□□□□□ -2.1
CLDND1-225ENST00000512147 KRTAP5-11Q6L8G4 156 aa1.9□□□□□ -2.11
CLDND1-225ENST00000512147 LCE1FQ5T754 118 aa1.87□□□□□ -2.11
CLDND1-225ENST00000512147 MT1AP04731 61 aa1.86□□□□□ -2.11
CLDND1-225ENST00000512147 KRTAP6-1Q3LI64 71 aa1.85□□□□□ -2.11
CLDND1-225ENST00000512147 KRTAP6-2Q3LI66 62 aa1.83□□□□□ -2.12
CLDND1-225ENST00000512147 LUZP6Q538Z0 58 aa1.8□□□□□ -2.12
CLDND1-225ENST00000512147 LCE1EQ5T753 118 aa1.78□□□□□ -2.12
CLDND1-225ENST00000512147 KRTAP4-4Q9BYR3 166 aa1.69□□□□□ -2.14
CLDND1-225ENST00000512147 LCE1BQ5T7P3 118 aa1.67□□□□□ -2.14
CLDND1-225ENST00000512147 LCE3EQ5T5B0 92 aa1.6□□□□□ -2.15
CLDND1-225ENST00000512147 LCE1CQ5T751 118 aa1.55□□□□□ -2.16
CLDND1-225ENST00000512147 KRTAP21-1Q3LI58 79 aa1.53□□□□□ -2.16
CLDND1-225ENST00000512147 LCE3DQ9BYE3 92 aa1.52□□□□□ -2.17
CLDND1-225ENST00000512147 MUC19Q7Z5P9 8384 aa1.45□□□□□ -2.18
CLDND1-225ENST00000512147 INE1O15225 51 aa1.28□□□□□ -2.2
CLDND1-225ENST00000512147 KRTAP21-2Q3LI59 83 aa1.26□□□□□ -2.21
CLDND1-225ENST00000512147 PRM1P04553 51 aa1.2□□□□□ -2.22
CLDND1-225ENST00000512147 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 11.2 ms