RNA–Protein interactions for RNA: ENST00000512019.1

SMAD1-211, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 847 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-211ENST00000512019 LCE3AQ5TA76 89 aa7.38□□□□□ -1.23
SMAD1-211ENST00000512019 KRTAP19-7Q3SYF9 63 aa7.28□□□□□ -1.24
SMAD1-211ENST00000512019 KRTAP19-5Q3LI72 72 aa7.25□□□□□ -1.25
SMAD1-211ENST00000512019 KRTAP23-1A1A580 65 aa7.24□□□□□ -1.25
SMAD1-211ENST00000512019 MT1EP04732 61 aa7.21□□□□□ -1.26
SMAD1-211ENST00000512019 GPR98Q8WXG9 6306 aa7.14□□□□□ -1.27
SMAD1-211ENST00000512019 PMAIP1Q13794 54 aa7.13□□□□□ -1.27
SMAD1-211ENST00000512019 PP632Q6XCG6 107 aa7.13□□□□□ -1.27
SMAD1-211ENST00000512019 KRTAP12-3P60328 96 aa7.12□□□□□ -1.27
SMAD1-211ENST00000512019 DSTQ03001 7570 aaKnown RBP7.11□□□□□ -1.27
SMAD1-211ENST00000512019 PRO0628Q9UI54 55 aa7.1□□□□□ -1.27
SMAD1-211ENST00000512019 KRTAP4-9Q9BYQ8 210 aa7.06□□□□□ -1.28
SMAD1-211ENST00000512019 LCE5AQ5TCM9 118 aa7.05□□□□□ -1.28
SMAD1-211ENST00000512019 KRTAP19-3Q7Z4W3 81 aa7.04□□□□□ -1.28
SMAD1-211ENST00000512019 MT1LQ93083 61 aa6.98□□□□□ -1.29
SMAD1-211ENST00000512019 MT1GP13640 62 aa6.94□□□□□ -1.3
SMAD1-211ENST00000512019 KRTAP15-1Q3LI76 137 aa6.84□□□□□ -1.31
SMAD1-211ENST00000512019 LCE1DQ5T752 114 aa6.84□□□□□ -1.31
SMAD1-211ENST00000512019 MT1MQ8N339 61 aa6.82□□□□□ -1.32
SMAD1-211ENST00000512019 KRTAP19-4Q3LI73 84 aa6.77□□□□□ -1.33
SMAD1-211ENST00000512019 MT4P47944 62 aa6.72□□□□□ -1.33
SMAD1-211ENST00000512019 HMCN1Q96RW7 5635 aa6.72□□□□□ -1.33
SMAD1-211ENST00000512019 LOC100996750A0A140TA64 210 aa6.7□□□□□ -1.34
SMAD1-211ENST00000512019 PRAC1Q96KF2 57 aa6.7□□□□□ -1.34
SMAD1-211ENST00000512019 KRTAP4-6Q9BYQ5 205 aa6.7□□□□□ -1.34
SMAD1-211ENST00000512019 LCE4AQ5TA78 99 aa6.69□□□□□ -1.34
SMAD1-211ENST00000512019 KTN1-AS1Q86SY8 53 aa6.67□□□□□ -1.34
SMAD1-211ENST00000512019 KRTAP4-7Q9BYR0 210 aa6.63□□□□□ -1.35
SMAD1-211ENST00000512019 AHNAK2Q8IVF2 5795 aa6.63□□□□□ -1.35
SMAD1-211ENST00000512019 LCE3CQ5T5A8 94 aa6.6□□□□□ -1.35
SMAD1-211ENST00000512019 KRTAP4-3Q9BYR4 195 aa6.6□□□□□ -1.35
SMAD1-211ENST00000512019 KRTAP5-4Q6L8H1 288 aa6.54□□□□□ -1.36
SMAD1-211ENST00000512019 KRTAP5-10Q6L8G5 202 aa6.5□□□□□ -1.37
SMAD1-211ENST00000512019 SVIPQ8NHG7 77 aa6.33□□□□□ -1.4
SMAD1-211ENST00000512019 KRTAP5-3Q6L8H2 238 aa6.28□□□□□ -1.4
SMAD1-211ENST00000512019 KRTAP5-7Q6L8G8 165 aa6.27□□□□□ -1.41
SMAD1-211ENST00000512019 KRTAP20-2Q3LI61 65 aa6.2□□□□□ -1.42
SMAD1-211ENST00000512019 KRTAP5-5Q701N2 237 aaPredicted RBP6.19□□□□□ -1.42
SMAD1-211ENST00000512019 KRTAP9-6A8MVA2 160 aa6.17□□□□□ -1.42
SMAD1-211ENST00000512019 SPRR5A0A1B0GTR4 108 aa6.09□□□□□ -1.43
SMAD1-211ENST00000512019 SYNE1Q8NF91 8797 aaKnown RBP6.06□□□□□ -1.44
SMAD1-211ENST00000512019 KRTAP12-4P60329 112 aa6.01□□□□□ -1.45
SMAD1-211ENST00000512019 MT1AP04731 61 aa5.96□□□□□ -1.46
SMAD1-211ENST00000512019 H3BS24 57 aa5.86□□□□□ -1.47
SMAD1-211ENST00000512019 KRTAP6-1Q3LI64 71 aa5.86□□□□□ -1.47
SMAD1-211ENST00000512019 KRTAP4-11Q9BYQ6 195 aa5.73□□□□□ -1.49
SMAD1-211ENST00000512019 KRTAP5-2Q701N4 177 aa5.68□□□□□ -1.5
SMAD1-211ENST00000512019 KRTAP9-4Q9BYQ2 154 aa5.68□□□□□ -1.5
SMAD1-211ENST00000512019 KRTAP4-12Q9BQ66 201 aa5.67□□□□□ -1.5
SMAD1-211ENST00000512019 KRTAP9-9Q9BYP9 154 aa5.66□□□□□ -1.5
SMAD1-211ENST00000512019 LUZP6Q538Z0 58 aa5.63□□□□□ -1.51
SMAD1-211ENST00000512019 KRTAP5-8O75690 187 aa5.57□□□□□ -1.52
SMAD1-211ENST00000512019 KRTAP6-2Q3LI66 62 aa5.5□□□□□ -1.53
SMAD1-211ENST00000512019 AHNAKQ09666 5890 aaKnown RBP5.49□□□□□ -1.53
SMAD1-211ENST00000512019 MUC5BQ9HC84 5762 aaPredicted RBP5.46□□□□□ -1.54
SMAD1-211ENST00000512019 MUC5ACP98088 5654 aa5.46□□□□□ -1.54
SMAD1-211ENST00000512019 MT3P25713 68 aa5.43□□□□□ -1.54
SMAD1-211ENST00000512019 OBSCNQ5VST9 7968 aa5.42□□□□□ -1.54
SMAD1-211ENST00000512019 KRTAP4-2Q9BYR5 136 aa5.21□□□□□ -1.58
SMAD1-211ENST00000512019 KRTAP5-1Q6L8H4 278 aa5.16□□□□□ -1.58
SMAD1-211ENST00000512019 NDUFAF8A1L188 74 aa5.04□□□□□ -1.6
SMAD1-211ENST00000512019 LCE3DQ9BYE3 92 aa4.88□□□□□ -1.63
SMAD1-211ENST00000512019 LCE1EQ5T753 118 aa4.85□□□□□ -1.63
SMAD1-211ENST00000512019 LCE3EQ5T5B0 92 aa4.68□□□□□ -1.66
SMAD1-211ENST00000512019 LCE1BQ5T7P3 118 aa4.57□□□□□ -1.68
SMAD1-211ENST00000512019 LCE1CQ5T751 118 aa4.5□□□□□ -1.69
SMAD1-211ENST00000512019 A0A0A0MQY5 61 aa4.34□□□□□ -1.71
SMAD1-211ENST00000512019 INE1O15225 51 aa4.19□□□□□ -1.74
SMAD1-211ENST00000512019 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.16□□□□□ -1.74
SMAD1-211ENST00000512019 KRTAP5-11Q6L8G4 156 aa4.05□□□□□ -1.76
SMAD1-211ENST00000512019 LCE1FQ5T754 118 aa3.99□□□□□ -1.77
SMAD1-211ENST00000512019 KRTAP21-2Q3LI59 83 aa3.85□□□□□ -1.79
SMAD1-211ENST00000512019 PRM1P04553 51 aa3.83□□□□□ -1.8
SMAD1-211ENST00000512019 PHGR1C9JFL3 82 aa3.8□□□□□ -1.8
SMAD1-211ENST00000512019 KRTAP4-4Q9BYR3 166 aa3.49□□□□□ -1.85
SMAD1-211ENST00000512019 MUC19Q7Z5P9 8384 aa3.38□□□□□ -1.87
SMAD1-211ENST00000512019 KRTAP21-1Q3LI58 79 aa2.85□□□□□ -1.95
SMAD1-211ENST00000512019 MUC16Q8WXI7 14507 aa2.4□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 59.8 ms