RNA–Protein interactions for RNA: ENST00000511812.5

SMN2-210, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 2 BASIC

Gene SMN2, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-210ENST00000511812 KRTAP19-5Q3LI72 72 aa6.2□□□□□ -1.42
SMN2-210ENST00000511812 LCE5AQ5TCM9 118 aa6.2□□□□□ -1.42
SMN2-210ENST00000511812 C10orf95Q9H7T3 257 aa6.19□□□□□ -1.42
SMN2-210ENST00000511812 LCE3AQ5TA76 89 aa6.1□□□□□ -1.43
SMN2-210ENST00000511812 MT1GP13640 62 aa6.09□□□□□ -1.43
SMN2-210ENST00000511812 PP632Q6XCG6 107 aa6.08□□□□□ -1.44
SMN2-210ENST00000511812 MIR22HGQ0VDD5 57 aa6.07□□□□□ -1.44
SMN2-210ENST00000511812 V9GYY9 64 aa6.06□□□□□ -1.44
SMN2-210ENST00000511812 K7ERS5 55 aa6.01□□□□□ -1.45
SMN2-210ENST00000511812 MT1LQ93083 61 aa6□□□□□ -1.45
SMN2-210ENST00000511812 PSPHP1O15172 72 aa5.98□□□□□ -1.45
SMN2-210ENST00000511812 Q1T7F1 81 aa5.96□□□□□ -1.46
SMN2-210ENST00000511812 MT1MQ8N339 61 aa5.96□□□□□ -1.46
SMN2-210ENST00000511812 KRTAP5-3Q6L8H2 238 aa5.94□□□□□ -1.46
SMN2-210ENST00000511812 DSTQ03001 7570 aaKnown RBP5.93□□□□□ -1.46
SMN2-210ENST00000511812 KRTAP12-3P60328 96 aa5.89□□□□□ -1.47
SMN2-210ENST00000511812 KRTAP25-1Q3LHN0 102 aa5.89□□□□□ -1.47
SMN2-210ENST00000511812 KRTAP19-4Q3LI73 84 aa5.82□□□□□ -1.48
SMN2-210ENST00000511812 A6NED7 52 aa5.81□□□□□ -1.48
SMN2-210ENST00000511812 KRTAP4-3Q9BYR4 195 aa5.79□□□□□ -1.48
SMN2-210ENST00000511812 RPS28P62857 69 aaKnown RBP5.7□□□□□ -1.5
SMN2-210ENST00000511812 MT4P47944 62 aa5.68□□□□□ -1.5
SMN2-210ENST00000511812 PCP4P48539 62 aa5.68□□□□□ -1.5
SMN2-210ENST00000511812 KRTAP23-1A1A580 65 aa5.66□□□□□ -1.5
SMN2-210ENST00000511812 CDC42SE1Q9NRR8 79 aa5.66□□□□□ -1.5
SMN2-210ENST00000511812 KRTAP5-4Q6L8H1 288 aa5.61□□□□□ -1.51
SMN2-210ENST00000511812 ROMO1P60602 79 aa5.55□□□□□ -1.52
SMN2-210ENST00000511812 HMCN1Q96RW7 5635 aa5.53□□□□□ -1.52
SMN2-210ENST00000511812 KRTAP15-1Q3LI76 137 aa5.53□□□□□ -1.52
SMN2-210ENST00000511812 GPR98Q8WXG9 6306 aa5.5□□□□□ -1.53
SMN2-210ENST00000511812 KRTAP5-5Q701N2 237 aaPredicted RBP5.42□□□□□ -1.54
SMN2-210ENST00000511812 LCE3CQ5T5A8 94 aa5.41□□□□□ -1.54
SMN2-210ENST00000511812 KRTAP12-4P60329 112 aa5.35□□□□□ -1.55
SMN2-210ENST00000511812 KRTAP20-2Q3LI61 65 aa5.32□□□□□ -1.56
SMN2-210ENST00000511812 SPRR5A0A1B0GTR4 108 aa5.31□□□□□ -1.56
SMN2-210ENST00000511812 AHNAK2Q8IVF2 5795 aa5.29□□□□□ -1.56
SMN2-210ENST00000511812 KRTAP5-10Q6L8G5 202 aa5.24□□□□□ -1.57
SMN2-210ENST00000511812 SYNE1Q8NF91 8797 aaKnown RBP5.21□□□□□ -1.58
SMN2-210ENST00000511812 MT1AP04731 61 aa5.12□□□□□ -1.59
SMN2-210ENST00000511812 H3BS24 57 aa5.11□□□□□ -1.59
SMN2-210ENST00000511812 KRTAP6-1Q3LI64 71 aa5.07□□□□□ -1.6
SMN2-210ENST00000511812 KRTAP9-6A8MVA2 160 aa5.05□□□□□ -1.6
SMN2-210ENST00000511812 BRK1Q8WUW1 75 aa5.05□□□□□ -1.6
SMN2-210ENST00000511812 KRTAP5-7Q6L8G8 165 aa5.03□□□□□ -1.6
SMN2-210ENST00000511812 KRTAP5-2Q701N4 177 aa4.93□□□□□ -1.62
SMN2-210ENST00000511812 KRTAP6-2Q3LI66 62 aa4.84□□□□□ -1.63
SMN2-210ENST00000511812 PMAIP1Q13794 54 aa4.76□□□□□ -1.65
SMN2-210ENST00000511812 MT3P25713 68 aa4.71□□□□□ -1.66
SMN2-210ENST00000511812 KRTAP5-8O75690 187 aa4.65□□□□□ -1.67
SMN2-210ENST00000511812 PRAC1Q96KF2 57 aa4.54□□□□□ -1.68
SMN2-210ENST00000511812 OBSCNQ5VST9 7968 aa4.5□□□□□ -1.69
SMN2-210ENST00000511812 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.42□□□□□ -1.7
SMN2-210ENST00000511812 SVIPQ8NHG7 77 aa4.41□□□□□ -1.7
SMN2-210ENST00000511812 KRTAP5-1Q6L8H4 278 aa4.4□□□□□ -1.71
SMN2-210ENST00000511812 PRO0628Q9UI54 55 aa4.4□□□□□ -1.71
SMN2-210ENST00000511812 MUC5BQ9HC84 5762 aaPredicted RBP4.34□□□□□ -1.71
SMN2-210ENST00000511812 MUC5ACP98088 5654 aa4.32□□□□□ -1.72
SMN2-210ENST00000511812 AHNAKQ09666 5890 aaKnown RBP4.31□□□□□ -1.72
SMN2-210ENST00000511812 LCE1EQ5T753 118 aa4.27□□□□□ -1.73
SMN2-210ENST00000511812 KRTAP5-11Q6L8G4 156 aa4.24□□□□□ -1.73
SMN2-210ENST00000511812 KTN1-AS1Q86SY8 53 aa4.22□□□□□ -1.73
SMN2-210ENST00000511812 LCE1BQ5T7P3 118 aa4.06□□□□□ -1.76
SMN2-210ENST00000511812 LCE1CQ5T751 118 aa3.96□□□□□ -1.78
SMN2-210ENST00000511812 LCE3DQ9BYE3 92 aa3.94□□□□□ -1.78
SMN2-210ENST00000511812 LUZP6Q538Z0 58 aa3.92□□□□□ -1.78
SMN2-210ENST00000511812 LCE3EQ5T5B0 92 aa3.72□□□□□ -1.81
SMN2-210ENST00000511812 KRTAP4-4Q9BYR3 166 aa3.68□□□□□ -1.82
SMN2-210ENST00000511812 A0A0A0MQY5 61 aa3.66□□□□□ -1.82
SMN2-210ENST00000511812 LCE1FQ5T754 118 aa3.48□□□□□ -1.85
SMN2-210ENST00000511812 KRTAP21-2Q3LI59 83 aa3.32□□□□□ -1.88
SMN2-210ENST00000511812 NDUFAF8A1L188 74 aa3.11□□□□□ -1.91
SMN2-210ENST00000511812 PHGR1C9JFL3 82 aa3.09□□□□□ -1.91
SMN2-210ENST00000511812 PRM1P04553 51 aa2.83□□□□□ -1.96
SMN2-210ENST00000511812 MUC19Q7Z5P9 8384 aa2.79□□□□□ -1.96
SMN2-210ENST00000511812 INE1O15225 51 aa2.52□□□□□ -2.01
SMN2-210ENST00000511812 KRTAP21-1Q3LI58 79 aa2.35□□□□□ -2.03
SMN2-210ENST00000511812 MUC16Q8WXI7 14507 aa2.02□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 123.6 ms