RNA–Protein interactions for RNA: ENST00000511598.5

RBM47-208, Transcript of RNA binding motif protein 47, human

TSL 2

Gene RBM47, Length 836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM47-208	ENST00000511598	LCE5A	Q5TCM9	118 aa		7.22	□□□□□ -1.25
RBM47-208	ENST00000511598	KRTAP19-3	Q7Z4W3	81 aa		7.21	□□□□□ -1.26
RBM47-208	ENST00000511598	KRTAP25-1	Q3LHN0	102 aa		7.18	□□□□□ -1.26
RBM47-208	ENST00000511598	KRTAP19-5	Q3LI72	72 aa		7.18	□□□□□ -1.26
RBM47-208	ENST00000511598	DST	Q03001	7570 aa	Known RBP	7.11	□□□□□ -1.27
RBM47-208	ENST00000511598	ROMO1	P60602	79 aa		7.08	□□□□□ -1.28
RBM47-208	ENST00000511598	BRK1	Q8WUW1	75 aa		7.05	□□□□□ -1.28
RBM47-208	ENST00000511598	KRTAP4-9	Q9BYQ8	210 aa		7.04	□□□□□ -1.28
RBM47-208	ENST00000511598	MT1G	P13640	62 aa		7.01	□□□□□ -1.29
RBM47-208	ENST00000511598	PP632	Q6XCG6	107 aa		6.99	□□□□□ -1.29
RBM47-208	ENST00000511598		H3BS24	57 aa		6.96	□□□□□ -1.3
RBM47-208	ENST00000511598	KRTAP12-3	P60328	96 aa		6.95	□□□□□ -1.3
RBM47-208	ENST00000511598	GPR98	Q8WXG9	6306 aa		6.93	□□□□□ -1.3
RBM47-208	ENST00000511598	MT1M	Q8N339	61 aa		6.91	□□□□□ -1.3
RBM47-208	ENST00000511598	MT1L	Q93083	61 aa		6.9	□□□□□ -1.3
RBM47-208	ENST00000511598	KRTAP23-1	A1A580	65 aa		6.87	□□□□□ -1.31
RBM47-208	ENST00000511598	LCE1D	Q5T752	114 aa		6.85	□□□□□ -1.31
RBM47-208	ENST00000511598	MT4	P47944	62 aa		6.79	□□□□□ -1.32
RBM47-208	ENST00000511598	LCE4A	Q5TA78	99 aa		6.79	□□□□□ -1.32
RBM47-208	ENST00000511598	KRTAP4-3	Q9BYR4	195 aa		6.77	□□□□□ -1.33
RBM47-208	ENST00000511598	HMCN1	Q96RW7	5635 aa		6.73	□□□□□ -1.33
RBM47-208	ENST00000511598	PMAIP1	Q13794	54 aa		6.64	□□□□□ -1.35
RBM47-208	ENST00000511598	KRTAP4-7	Q9BYR0	210 aa		6.64	□□□□□ -1.35
RBM47-208	ENST00000511598	KRTAP15-1	Q3LI76	137 aa		6.63	□□□□□ -1.35
RBM47-208	ENST00000511598	KRTAP5-4	Q6L8H1	288 aa		6.61	□□□□□ -1.35
RBM47-208	ENST00000511598	AHNAK2	Q8IVF2	5795 aa		6.55	□□□□□ -1.36
RBM47-208	ENST00000511598	KRTAP4-6	Q9BYQ5	205 aa		6.54	□□□□□ -1.36
RBM47-208	ENST00000511598	PRO0628	Q9UI54	55 aa		6.48	□□□□□ -1.37
RBM47-208	ENST00000511598	KRTAP19-4	Q3LI73	84 aa		6.46	□□□□□ -1.38
RBM47-208	ENST00000511598	LCE3C	Q5T5A8	94 aa		6.43	□□□□□ -1.38
RBM47-208	ENST00000511598	LOC100996750	A0A140TA64	210 aa		6.42	□□□□□ -1.38
RBM47-208	ENST00000511598	KRTAP5-10	Q6L8G5	202 aa		6.39	□□□□□ -1.39
RBM47-208	ENST00000511598	PRAC1	Q96KF2	57 aa		6.33	□□□□□ -1.4
RBM47-208	ENST00000511598	KRTAP5-5	Q701N2	237 aa	Predicted RBP	6.3	□□□□□ -1.4
RBM47-208	ENST00000511598	KRTAP20-2	Q3LI61	65 aa		6.28	□□□□□ -1.4
RBM47-208	ENST00000511598	KRTAP12-4	P60329	112 aa		6.23	□□□□□ -1.41
RBM47-208	ENST00000511598	KRTAP5-3	Q6L8H2	238 aa		6.23	□□□□□ -1.41
RBM47-208	ENST00000511598	SPRR5	A0A1B0GTR4	108 aa		6.22	□□□□□ -1.41
RBM47-208	ENST00000511598	KRTAP5-7	Q6L8G8	165 aa		6.15	□□□□□ -1.42
RBM47-208	ENST00000511598	KTN1-AS1	Q86SY8	53 aa		6.1	□□□□□ -1.43
RBM47-208	ENST00000511598	KRTAP9-6	A8MVA2	160 aa		6.06	□□□□□ -1.44
RBM47-208	ENST00000511598	SYNE1	Q8NF91	8797 aa	Known RBP	6.04	□□□□□ -1.44
RBM47-208	ENST00000511598	KRTAP4-12	Q9BQ66	201 aa		5.96	□□□□□ -1.46
RBM47-208	ENST00000511598	SVIP	Q8NHG7	77 aa		5.89	□□□□□ -1.47
RBM47-208	ENST00000511598	MT1A	P04731	61 aa		5.87	□□□□□ -1.47
RBM47-208	ENST00000511598	KRTAP6-1	Q3LI64	71 aa		5.85	□□□□□ -1.47
RBM47-208	ENST00000511598	KRTAP5-2	Q701N4	177 aa		5.77	□□□□□ -1.49
RBM47-208	ENST00000511598	KRTAP4-11	Q9BYQ6	195 aa		5.76	□□□□□ -1.49
RBM47-208	ENST00000511598	KRTAP9-4	Q9BYQ2	154 aa		5.67	□□□□□ -1.5
RBM47-208	ENST00000511598	KRTAP9-9	Q9BYP9	154 aa		5.65	□□□□□ -1.5
RBM47-208	ENST00000511598	KRTAP6-2	Q3LI66	62 aa		5.62	□□□□□ -1.51
RBM47-208	ENST00000511598	KRTAP5-8	O75690	187 aa		5.56	□□□□□ -1.52
RBM47-208	ENST00000511598	AHNAK	Q09666	5890 aa	Known RBP	5.43	□□□□□ -1.54
RBM47-208	ENST00000511598	OBSCN	Q5VST9	7968 aa		5.42	□□□□□ -1.54
RBM47-208	ENST00000511598	MUC5AC	P98088	5654 aa		5.41	□□□□□ -1.54
RBM47-208	ENST00000511598	MUC5B	Q9HC84	5762 aa	Predicted RBP	5.38	□□□□□ -1.55
RBM47-208	ENST00000511598	MT3	P25713	68 aa		5.38	□□□□□ -1.55
RBM47-208	ENST00000511598	LUZP6	Q538Z0	58 aa		5.24	□□□□□ -1.57
RBM47-208	ENST00000511598	KRTAP5-1	Q6L8H4	278 aa		5.2	□□□□□ -1.58
RBM47-208	ENST00000511598	KRTAP4-2	Q9BYR5	136 aa		5.01	□□□□□ -1.61
RBM47-208	ENST00000511598	LCE1E	Q5T753	118 aa		4.93	□□□□□ -1.62
RBM47-208	ENST00000511598		A0A0A0MQY5	61 aa		4.87	□□□□□ -1.63
RBM47-208	ENST00000511598	LCE1B	Q5T7P3	118 aa		4.74	□□□□□ -1.65
RBM47-208	ENST00000511598	LCE3D	Q9BYE3	92 aa		4.73	□□□□□ -1.65
RBM47-208	ENST00000511598	NDUFAF8	A1L188	74 aa		4.66	□□□□□ -1.66
RBM47-208	ENST00000511598	LCE1C	Q5T751	118 aa		4.58	□□□□□ -1.68
RBM47-208	ENST00000511598	LCE3E	Q5T5B0	92 aa		4.52	□□□□□ -1.69
RBM47-208	ENST00000511598	KRTAP5-11	Q6L8G4	156 aa		4.16	□□□□□ -1.74
RBM47-208	ENST00000511598	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.13	□□□□□ -1.75
RBM47-208	ENST00000511598	LCE1F	Q5T754	118 aa		4.06	□□□□□ -1.76
RBM47-208	ENST00000511598	KRTAP21-2	Q3LI59	83 aa		3.82	□□□□□ -1.8
RBM47-208	ENST00000511598	PHGR1	C9JFL3	82 aa		3.77	□□□□□ -1.81
RBM47-208	ENST00000511598	INE1	O15225	51 aa		3.75	□□□□□ -1.81
RBM47-208	ENST00000511598	PRM1	P04553	51 aa		3.67	□□□□□ -1.82
RBM47-208	ENST00000511598	KRTAP4-4	Q9BYR3	166 aa		3.59	□□□□□ -1.83
RBM47-208	ENST00000511598	MUC19	Q7Z5P9	8384 aa		3.34	□□□□□ -1.88
RBM47-208	ENST00000511598	KRTAP21-1	Q3LI58	79 aa		2.85	□□□□□ -1.95
RBM47-208	ENST00000511598	MUC16	Q8WXI7	14507 aa		2.4	□□□□□ -2.03

Retrieved 78 of 20,778 RNA–protein pairs in 50.3 ms