RNA–Protein interactions for RNA: ENST00000509692.5

SKP2-205, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2

Gene SKP2, Length 1,646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-205ENST00000509692 KRTAP19-7Q3SYF9 63 aa6.1□□□□□ -1.43
SKP2-205ENST00000509692 KRTAP19-5Q3LI72 72 aa6.07□□□□□ -1.44
SKP2-205ENST00000509692 KRTAP2-2Q9BYT5 123 aa6.07□□□□□ -1.44
SKP2-205ENST00000509692 KRTAP2-1Q9BYU5 128 aa6.07□□□□□ -1.44
SKP2-205ENST00000509692 MT1EP04732 61 aa6.04□□□□□ -1.44
SKP2-205ENST00000509692 LCE3BQ5TA77 95 aa6□□□□□ -1.45
SKP2-205ENST00000509692 LCE5AQ5TCM9 118 aa5.96□□□□□ -1.45
SKP2-205ENST00000509692 KRTAP23-1A1A580 65 aa5.96□□□□□ -1.46
SKP2-205ENST00000509692 KRTAP19-3Q7Z4W3 81 aa5.95□□□□□ -1.46
SKP2-205ENST00000509692 DSTQ03001 7570 aaKnown RBP5.94□□□□□ -1.46
SKP2-205ENST00000509692 KRTAP12-3P60328 96 aa5.91□□□□□ -1.46
SKP2-205ENST00000509692 KRTAP9-9Q9BYP9 154 aa5.88□□□□□ -1.47
SKP2-205ENST00000509692 KRTAP9-4Q9BYQ2 154 aa5.88□□□□□ -1.47
SKP2-205ENST00000509692 PP632Q6XCG6 107 aa5.84□□□□□ -1.47
SKP2-205ENST00000509692 MT1LQ93083 61 aa5.84□□□□□ -1.47
SKP2-205ENST00000509692 MT1GP13640 62 aa5.81□□□□□ -1.48
SKP2-205ENST00000509692 KRTAP4-12Q9BQ66 201 aa5.81□□□□□ -1.48
SKP2-205ENST00000509692 PMAIP1Q13794 54 aa5.79□□□□□ -1.48
SKP2-205ENST00000509692 MT1MQ8N339 61 aa5.74□□□□□ -1.49
SKP2-205ENST00000509692 KRTAP4-7Q9BYR0 210 aa5.73□□□□□ -1.49
SKP2-205ENST00000509692 PRO0628Q9UI54 55 aa5.72□□□□□ -1.49
SKP2-205ENST00000509692 KRTAP15-1Q3LI76 137 aa5.67□□□□□ -1.5
SKP2-205ENST00000509692 KRTAP4-3Q9BYR4 195 aa5.63□□□□□ -1.51
SKP2-205ENST00000509692 KRTAP19-4Q3LI73 84 aa5.59□□□□□ -1.52
SKP2-205ENST00000509692 LCE1DQ5T752 114 aa5.59□□□□□ -1.52
SKP2-205ENST00000509692 KRTAP4-9Q9BYQ8 210 aa5.59□□□□□ -1.52
SKP2-205ENST00000509692 KRTAP4-2Q9BYR5 136 aa5.49□□□□□ -1.53
SKP2-205ENST00000509692 LCE3CQ5T5A8 94 aa5.48□□□□□ -1.53
SKP2-205ENST00000509692 PRAC1Q96KF2 57 aa5.48□□□□□ -1.53
SKP2-205ENST00000509692 HMCN1Q96RW7 5635 aa5.46□□□□□ -1.53
SKP2-205ENST00000509692 LCE4AQ5TA78 99 aa5.45□□□□□ -1.54
SKP2-205ENST00000509692 SVIPQ8NHG7 77 aa5.41□□□□□ -1.54
SKP2-205ENST00000509692 MT4P47944 62 aa5.41□□□□□ -1.54
SKP2-205ENST00000509692 KRTAP5-4Q6L8H1 288 aa5.41□□□□□ -1.54
SKP2-205ENST00000509692 GPR98Q8WXG9 6306 aa5.38□□□□□ -1.55
SKP2-205ENST00000509692 KTN1-AS1Q86SY8 53 aa5.37□□□□□ -1.55
SKP2-205ENST00000509692 KRTAP5-3Q6L8H2 238 aa5.27□□□□□ -1.57
SKP2-205ENST00000509692 KRTAP5-5Q701N2 237 aaPredicted RBP5.26□□□□□ -1.57
SKP2-205ENST00000509692 AHNAK2Q8IVF2 5795 aa5.22□□□□□ -1.57
SKP2-205ENST00000509692 KRTAP4-11Q9BYQ6 195 aa5.2□□□□□ -1.58
SKP2-205ENST00000509692 KRTAP9-6A8MVA2 160 aa5.16□□□□□ -1.58
SKP2-205ENST00000509692 H3BS24 57 aa5.14□□□□□ -1.59
SKP2-205ENST00000509692 SYNE1Q8NF91 8797 aaKnown RBP5.11□□□□□ -1.59
SKP2-205ENST00000509692 KRTAP20-2Q3LI61 65 aa5.09□□□□□ -1.59
SKP2-205ENST00000509692 SPRR5A0A1B0GTR4 108 aa5.06□□□□□ -1.6
SKP2-205ENST00000509692 KRTAP12-4P60329 112 aa5.05□□□□□ -1.6
SKP2-205ENST00000509692 KRTAP5-10Q6L8G5 202 aa5.01□□□□□ -1.61
SKP2-205ENST00000509692 MT1AP04731 61 aa4.97□□□□□ -1.61
SKP2-205ENST00000509692 KRTAP6-1Q3LI64 71 aa4.93□□□□□ -1.62
SKP2-205ENST00000509692 KRTAP5-7Q6L8G8 165 aa4.79□□□□□ -1.64
SKP2-205ENST00000509692 KRTAP5-2Q701N4 177 aa4.76□□□□□ -1.65
SKP2-205ENST00000509692 KRTAP6-2Q3LI66 62 aa4.65□□□□□ -1.66
SKP2-205ENST00000509692 OBSCNQ5VST9 7968 aa4.56□□□□□ -1.68
SKP2-205ENST00000509692 LUZP6Q538Z0 58 aa4.55□□□□□ -1.68
SKP2-205ENST00000509692 MT3P25713 68 aa4.54□□□□□ -1.68
SKP2-205ENST00000509692 KRTAP5-8O75690 187 aa4.47□□□□□ -1.69
SKP2-205ENST00000509692 MUC5BQ9HC84 5762 aaPredicted RBP4.29□□□□□ -1.72
SKP2-205ENST00000509692 KRTAP5-1Q6L8H4 278 aa4.25□□□□□ -1.73
SKP2-205ENST00000509692 MUC5ACP98088 5654 aa4.24□□□□□ -1.73
SKP2-205ENST00000509692 AHNAKQ09666 5890 aaKnown RBP4.23□□□□□ -1.73
SKP2-205ENST00000509692 LCE1EQ5T753 118 aa4.09□□□□□ -1.76
SKP2-205ENST00000509692 NDUFAF8A1L188 74 aa4.08□□□□□ -1.76
SKP2-205ENST00000509692 LCE3DQ9BYE3 92 aa4.04□□□□□ -1.76
SKP2-205ENST00000509692 A0A0A0MQY5 61 aa3.98□□□□□ -1.77
SKP2-205ENST00000509692 LCE3EQ5T5B0 92 aa3.88□□□□□ -1.79
SKP2-205ENST00000509692 LCE1BQ5T7P3 118 aa3.85□□□□□ -1.79
SKP2-205ENST00000509692 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.84□□□□□ -1.79
SKP2-205ENST00000509692 LCE1CQ5T751 118 aa3.8□□□□□ -1.8
SKP2-205ENST00000509692 KRTAP5-11Q6L8G4 156 aa3.49□□□□□ -1.85
SKP2-205ENST00000509692 INE1O15225 51 aa3.34□□□□□ -1.87
SKP2-205ENST00000509692 LCE1FQ5T754 118 aa3.3□□□□□ -1.88
SKP2-205ENST00000509692 KRTAP21-2Q3LI59 83 aa3.23□□□□□ -1.89
SKP2-205ENST00000509692 KRTAP4-4Q9BYR3 166 aa3.18□□□□□ -1.9
SKP2-205ENST00000509692 PRM1P04553 51 aa3.15□□□□□ -1.9
SKP2-205ENST00000509692 PHGR1C9JFL3 82 aa2.97□□□□□ -1.93
SKP2-205ENST00000509692 MUC19Q7Z5P9 8384 aa2.8□□□□□ -1.96
SKP2-205ENST00000509692 KRTAP21-1Q3LI58 79 aa2.18□□□□□ -2.06
SKP2-205ENST00000509692 MUC16Q8WXI7 14507 aa1.96□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 76.2 ms