RNA–Protein interactions for RNA: ENST00000509420.5

SDHA-210, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 580 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-210ENST00000509420 GPR98Q8WXG9 6306 aa4.87□□□□□ -1.63
SDHA-210ENST00000509420 KRTAP12-1P59990 96 aa4.86□□□□□ -1.63
SDHA-210ENST00000509420 KRTAP15-1Q3LI76 137 aa4.85□□□□□ -1.63
SDHA-210ENST00000509420 SMIM26A0A096LP01 95 aa4.8□□□□□ -1.64
SDHA-210ENST00000509420 HMCN1Q96RW7 5635 aa4.8□□□□□ -1.64
SDHA-210ENST00000509420 MT1GP13640 62 aa4.79□□□□□ -1.64
SDHA-210ENST00000509420 A0A1B0GU33 70 aa4.78□□□□□ -1.64
SDHA-210ENST00000509420 H7BZZ5 65 aa4.78□□□□□ -1.64
SDHA-210ENST00000509420 SPINT4Q6UDR6 99 aa4.77□□□□□ -1.65
SDHA-210ENST00000509420 MT1MQ8N339 61 aa4.77□□□□□ -1.65
SDHA-210ENST00000509420 MT1LQ93083 61 aa4.77□□□□□ -1.65
SDHA-210ENST00000509420 SERP1Q9Y6X1 66 aa4.77□□□□□ -1.65
SDHA-210ENST00000509420 ATP5EP56381 51 aaPredicted RBP4.72□□□□□ -1.65
SDHA-210ENST00000509420 KRTAP4-3Q9BYR4 195 aa4.71□□□□□ -1.66
SDHA-210ENST00000509420 A8MU10 97 aa4.7□□□□□ -1.66
SDHA-210ENST00000509420 BRK1Q8WUW1 75 aa4.69□□□□□ -1.66
SDHA-210ENST00000509420 LCE3AQ5TA76 89 aa4.68□□□□□ -1.66
SDHA-210ENST00000509420 C10orf95Q9H7T3 257 aa4.68□□□□□ -1.66
SDHA-210ENST00000509420 KRTAP5-4Q6L8H1 288 aa4.66□□□□□ -1.66
SDHA-210ENST00000509420 PP632Q6XCG6 107 aa4.66□□□□□ -1.66
SDHA-210ENST00000509420 AHNAK2Q8IVF2 5795 aa4.65□□□□□ -1.67
SDHA-210ENST00000509420 MT4P47944 62 aa4.63□□□□□ -1.67
SDHA-210ENST00000509420 KRTAP5-3Q6L8H2 238 aa4.61□□□□□ -1.67
SDHA-210ENST00000509420 KTN1-AS1Q86SY8 53 aa4.61□□□□□ -1.67
SDHA-210ENST00000509420 A0A1B0GU69 56 aa4.6□□□□□ -1.67
SDHA-210ENST00000509420 A0A0A0MQY5 61 aa4.54□□□□□ -1.68
SDHA-210ENST00000509420 TNP1P09430 55 aa4.53□□□□□ -1.68
SDHA-210ENST00000509420 KRTAP5-10Q6L8G5 202 aa4.52□□□□□ -1.69
SDHA-210ENST00000509420 Q1T7F1 81 aa4.49□□□□□ -1.69
SDHA-210ENST00000509420 KRTAP12-3P60328 96 aa4.46□□□□□ -1.7
SDHA-210ENST00000509420 KRTAP5-5Q701N2 237 aaPredicted RBP4.46□□□□□ -1.7
SDHA-210ENST00000509420 LINC01558Q9Y6Z2 57 aa4.43□□□□□ -1.7
SDHA-210ENST00000509420 PSPHP1O15172 72 aa4.38□□□□□ -1.71
SDHA-210ENST00000509420 KRTAP20-2Q3LI61 65 aa4.37□□□□□ -1.71
SDHA-210ENST00000509420 PRR15LQ9BU68 103 aa4.35□□□□□ -1.71
SDHA-210ENST00000509420 KRTAP5-7Q6L8G8 165 aa4.33□□□□□ -1.72
SDHA-210ENST00000509420 SPRR5A0A1B0GTR4 108 aa4.3□□□□□ -1.72
SDHA-210ENST00000509420 UQCR11O14957 56 aa4.27□□□□□ -1.73
SDHA-210ENST00000509420 KRTAP25-1Q3LHN0 102 aa4.25□□□□□ -1.73
SDHA-210ENST00000509420 SYNE1Q8NF91 8797 aaKnown RBP4.25□□□□□ -1.73
SDHA-210ENST00000509420 CDC42SE1Q9NRR8 79 aa4.24□□□□□ -1.73
SDHA-210ENST00000509420 KRTAP12-4P60329 112 aa4.19□□□□□ -1.74
SDHA-210ENST00000509420 MIR22HGQ0VDD5 57 aa4.18□□□□□ -1.74
SDHA-210ENST00000509420 A6NED7 52 aa4.17□□□□□ -1.74
SDHA-210ENST00000509420 LCE3CQ5T5A8 94 aa4.11□□□□□ -1.75
SDHA-210ENST00000509420 KRTAP5-2Q701N4 177 aa4.08□□□□□ -1.76
SDHA-210ENST00000509420 ROMO1P60602 79 aa4.05□□□□□ -1.76
SDHA-210ENST00000509420 KRTAP6-1Q3LI64 71 aa4.05□□□□□ -1.76
SDHA-210ENST00000509420 MT1AP04731 61 aa4.03□□□□□ -1.76
SDHA-210ENST00000509420 KRTAP9-6A8MVA2 160 aa4.02□□□□□ -1.77
SDHA-210ENST00000509420 PRAC1Q96KF2 57 aa4.01□□□□□ -1.77
SDHA-210ENST00000509420 K7ERS5 55 aa3.99□□□□□ -1.77
SDHA-210ENST00000509420 KRTAP5-8O75690 187 aa3.91□□□□□ -1.78
SDHA-210ENST00000509420 MUC5BQ9HC84 5762 aaPredicted RBP3.88□□□□□ -1.79
SDHA-210ENST00000509420 KRTAP6-2Q3LI66 62 aa3.87□□□□□ -1.79
SDHA-210ENST00000509420 LUZP6Q538Z0 58 aa3.87□□□□□ -1.79
SDHA-210ENST00000509420 MT3P25713 68 aa3.86□□□□□ -1.79
SDHA-210ENST00000509420 MUC5ACP98088 5654 aa3.84□□□□□ -1.79
SDHA-210ENST00000509420 AHNAKQ09666 5890 aaKnown RBP3.84□□□□□ -1.79
SDHA-210ENST00000509420 OBSCNQ5VST9 7968 aa3.75□□□□□ -1.81
SDHA-210ENST00000509420 NDUFAF8A1L188 74 aa3.71□□□□□ -1.82
SDHA-210ENST00000509420 KRTAP5-1Q6L8H4 278 aa3.68□□□□□ -1.82
SDHA-210ENST00000509420 LCE1EQ5T753 118 aa3.48□□□□□ -1.85
SDHA-210ENST00000509420 KRTAP5-11Q6L8G4 156 aa3.38□□□□□ -1.87
SDHA-210ENST00000509420 LCE1FQ5T754 118 aa3.37□□□□□ -1.87
SDHA-210ENST00000509420 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.34□□□□□ -1.87
SDHA-210ENST00000509420 INE1O15225 51 aa3.26□□□□□ -1.89
SDHA-210ENST00000509420 LCE1CQ5T751 118 aa3.18□□□□□ -1.9
SDHA-210ENST00000509420 LCE1BQ5T7P3 118 aa3.18□□□□□ -1.9
SDHA-210ENST00000509420 LCE3DQ9BYE3 92 aa2.9□□□□□ -1.95
SDHA-210ENST00000509420 LCE3EQ5T5B0 92 aa2.86□□□□□ -1.95
SDHA-210ENST00000509420 KRTAP4-4Q9BYR3 166 aa2.75□□□□□ -1.97
SDHA-210ENST00000509420 KRTAP21-2Q3LI59 83 aa2.7□□□□□ -1.98
SDHA-210ENST00000509420 PHGR1C9JFL3 82 aa2.56□□□□□ -2
SDHA-210ENST00000509420 MUC19Q7Z5P9 8384 aa2.31□□□□□ -2.04
SDHA-210ENST00000509420 PRM1P04553 51 aa1.97□□□□□ -2.09
SDHA-210ENST00000509420 KRTAP21-1Q3LI58 79 aa1.93□□□□□ -2.1
SDHA-210ENST00000509420 MUC16Q8WXI7 14507 aa1.65□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 67.6 ms