RNA–Protein interactions for RNA: ENST00000509368.6

PDE4D-218, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-218ENST00000509368 IGLV5-48A0A075B6I7 105 aa0.87□□□□□ -2.27
PDE4D-218ENST00000509368 POLR2KP53803 58 aaKnown RBP0.86□□□□□ -2.27
PDE4D-218ENST00000509368 KRTAP5-7Q6L8G8 165 aa0.86□□□□□ -2.27
PDE4D-218ENST00000509368 FSIP2Q5CZC0 6907 aa0.86□□□□□ -2.27
PDE4D-218ENST00000509368 KRTAP21-2Q3LI59 83 aa0.85□□□□□ -2.27
PDE4D-218ENST00000509368 C6orf48Q9UBA6 75 aa0.85□□□□□ -2.27
PDE4D-218ENST00000509368 IAPPP10997 89 aa0.84□□□□□ -2.27
PDE4D-218ENST00000509368 KRTAP12-4P60329 112 aa0.84□□□□□ -2.27
PDE4D-218ENST00000509368 MUC19Q7Z5P9 8384 aa0.84□□□□□ -2.27
PDE4D-218ENST00000509368 COX6A2Q02221 97 aa0.84□□□□□ -2.28
PDE4D-218ENST00000509368 KRTAP19-2Q3LHN2 52 aa0.83□□□□□ -2.28
PDE4D-218ENST00000509368 KRTAP20-1Q3LI63 56 aa0.83□□□□□ -2.28
PDE4D-218ENST00000509368 A0A096LNI7 61 aa0.83□□□□□ -2.28
PDE4D-218ENST00000509368 SPINK1P00995 79 aa0.83□□□□□ -2.28
PDE4D-218ENST00000509368 MT1HP80294 61 aa0.83□□□□□ -2.28
PDE4D-218ENST00000509368 H0YAA0 97 aa0.83□□□□□ -2.28
PDE4D-218ENST00000509368 KRTAP12-3P60328 96 aa0.83□□□□□ -2.28
PDE4D-218ENST00000509368 KRTAP4-1Q9BYQ7 146 aa0.82□□□□□ -2.28
PDE4D-218ENST00000509368 C10orf95Q9H7T3 257 aa0.82□□□□□ -2.28
PDE4D-218ENST00000509368 H1FX-AS1Q4G0G2 97 aa0.81□□□□□ -2.28
PDE4D-218ENST00000509368 M0QY20 66 aa0.8□□□□□ -2.28
PDE4D-218ENST00000509368 SPRR1BP22528 89 aa0.8□□□□□ -2.28
PDE4D-218ENST00000509368 KRTAP19-6Q3LI70 58 aa0.79□□□□□ -2.28
PDE4D-218ENST00000509368 FCGBPQ9Y6R7 5405 aaPredicted RBP0.79□□□□□ -2.28
PDE4D-218ENST00000509368 CLPSL2Q6UWE3 100 aa0.79□□□□□ -2.28
PDE4D-218ENST00000509368 FLGP20930 4061 aaPredicted RBP0.79□□□□□ -2.28
PDE4D-218ENST00000509368 KRTAP2-3P0C7H8 128 aa0.79□□□□□ -2.28
PDE4D-218ENST00000509368 KRTAP2-4Q9BYR9 128 aa0.79□□□□□ -2.28
PDE4D-218ENST00000509368 USH2AO75445 5202 aa0.79□□□□□ -2.28
PDE4D-218ENST00000509368 SPRR1AP35321 89 aa0.78□□□□□ -2.28
PDE4D-218ENST00000509368 MMP24-AS1A0A0U1RRL7 71 aa0.78□□□□□ -2.29
PDE4D-218ENST00000509368 KMT2DO14686 5537 aa0.77□□□□□ -2.29
PDE4D-218ENST00000509368 MDN1Q9NU22 5596 aa0.77□□□□□ -2.29
PDE4D-218ENST00000509368 RPL39P62891 51 aaKnown RBP0.77□□□□□ -2.29
PDE4D-218ENST00000509368 M0R2T5 61 aa0.76□□□□□ -2.29
PDE4D-218ENST00000509368 WFDC13Q8IUB5 93 aa0.76□□□□□ -2.29
PDE4D-218ENST00000509368 RPL39LQ96EH5 51 aaKnown RBP0.76□□□□□ -2.29
PDE4D-218ENST00000509368 KRTAP5-10Q6L8G5 202 aa0.76□□□□□ -2.29
PDE4D-218ENST00000509368 DEFB105AQ8NG35 78 aa0.75□□□□□ -2.29
PDE4D-218ENST00000509368 MT2AP02795 61 aa0.74□□□□□ -2.29
PDE4D-218ENST00000509368 MT1FP04733 61 aa0.73□□□□□ -2.29
PDE4D-218ENST00000509368 KRTAP2-1Q9BYU5 128 aa0.73□□□□□ -2.29
PDE4D-218ENST00000509368 PRLHP81277 87 aa0.72□□□□□ -2.29
PDE4D-218ENST00000509368 S4R3F8 94 aa0.72□□□□□ -2.29
PDE4D-218ENST00000509368 MUC12Q9UKN1 5478 aa0.71□□□□□ -2.3
PDE4D-218ENST00000509368 KRTAP19-8Q3LI54 63 aa0.7□□□□□ -2.3
PDE4D-218ENST00000509368 A0A0D9SG42 100 aa0.7□□□□□ -2.3
PDE4D-218ENST00000509368 C9orf92A6NGG3 77 aa0.7□□□□□ -2.3
PDE4D-218ENST00000509368 TOMM7Q9P0U1 55 aa0.7□□□□□ -2.3
PDE4D-218ENST00000509368 M0QZ58 72 aa0.69□□□□□ -2.3
PDE4D-218ENST00000509368 SPRR2GQ9BYE4 73 aa0.68□□□□□ -2.3
PDE4D-218ENST00000509368 MT1BP07438 61 aa0.65□□□□□ -2.3
PDE4D-218ENST00000509368 SPRR2EP22531 72 aa0.65□□□□□ -2.3
PDE4D-218ENST00000509368 SPRR2BP35325 72 aa0.65□□□□□ -2.3
PDE4D-218ENST00000509368 SPRR2AP35326 72 aa0.65□□□□□ -2.3
PDE4D-218ENST00000509368 SPRR2DP22532 72 aa0.64□□□□□ -2.31
PDE4D-218ENST00000509368 SPRR2FQ96RM1 72 aa0.64□□□□□ -2.31
PDE4D-218ENST00000509368 KRTAP8-1Q8IUC2 63 aa0.61□□□□□ -2.31
PDE4D-218ENST00000509368 TNP1P09430 55 aa0.6□□□□□ -2.31
PDE4D-218ENST00000509368 MT1XP80297 61 aa0.59□□□□□ -2.31
PDE4D-218ENST00000509368 DSTQ03001 7570 aaKnown RBP0.59□□□□□ -2.32
PDE4D-218ENST00000509368 MT1GP13640 62 aa0.57□□□□□ -2.32
PDE4D-218ENST00000509368 KRTAP19-3Q7Z4W3 81 aa0.56□□□□□ -2.32
PDE4D-218ENST00000509368 MT4P47944 62 aa0.54□□□□□ -2.32
PDE4D-218ENST00000509368 MT1MQ8N339 61 aa0.54□□□□□ -2.32
PDE4D-218ENST00000509368 MT1EP04732 61 aa0.53□□□□□ -2.32
PDE4D-218ENST00000509368 KRTAP19-7Q3SYF9 63 aa0.53□□□□□ -2.32
PDE4D-218ENST00000509368 KRTAP20-2Q3LI61 65 aa0.53□□□□□ -2.32
PDE4D-218ENST00000509368 MT1LQ93083 61 aa0.49□□□□□ -2.33
PDE4D-218ENST00000509368 SYNE1Q8NF91 8797 aaKnown RBP0.48□□□□□ -2.33
PDE4D-218ENST00000509368 MT1AP04731 61 aa0.48□□□□□ -2.33
PDE4D-218ENST00000509368 MUC16Q8WXI7 14507 aa0.47□□□□□ -2.33
PDE4D-218ENST00000509368 KRTAP19-5Q3LI72 72 aa0.47□□□□□ -2.33
PDE4D-218ENST00000509368 PRM1P04553 51 aa0.45□□□□□ -2.34
PDE4D-218ENST00000509368 KRTAP21-1Q3LI58 79 aa0.44□□□□□ -2.34
PDE4D-218ENST00000509368 KRTAP6-1Q3LI64 71 aa0.41□□□□□ -2.34
PDE4D-218ENST00000509368 KRTAP6-2Q3LI66 62 aa0.41□□□□□ -2.34
PDE4D-218ENST00000509368 PHGR1C9JFL3 82 aa0.37□□□□□ -2.35
Retrieved 78 of 20,778 RNA–protein pairs in 63.2 ms