RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 V9GYY9 64 aa3.29□□□□□ -1.88
PDLIM5-213ENST00000509357 H3BS24 57 aa3.24□□□□□ -1.89
PDLIM5-213ENST00000509357 MT1EP04732 61 aa3.24□□□□□ -1.89
PDLIM5-213ENST00000509357 LCE1DQ5T752 114 aa3.24□□□□□ -1.89
PDLIM5-213ENST00000509357 LCE3AQ5TA76 89 aa3.24□□□□□ -1.89
PDLIM5-213ENST00000509357 KRTAP19-5Q3LI72 72 aa3.23□□□□□ -1.89
PDLIM5-213ENST00000509357 DSTQ03001 7570 aaKnown RBP3.23□□□□□ -1.89
PDLIM5-213ENST00000509357 KRTAP4-2Q9BYR5 136 aa3.22□□□□□ -1.89
PDLIM5-213ENST00000509357 A6NED7 52 aa3.21□□□□□ -1.9
PDLIM5-213ENST00000509357 KRTAP19-3Q7Z4W3 81 aa3.21□□□□□ -1.9
PDLIM5-213ENST00000509357 TNP1P09430 55 aa3.19□□□□□ -1.9
PDLIM5-213ENST00000509357 LCE5AQ5TCM9 118 aa3.19□□□□□ -1.9
PDLIM5-213ENST00000509357 KRTAP4-9Q9BYQ8 210 aa3.19□□□□□ -1.9
PDLIM5-213ENST00000509357 KRTAP5-3Q6L8H2 238 aa3.16□□□□□ -1.9
PDLIM5-213ENST00000509357 PP632Q6XCG6 107 aa3.15□□□□□ -1.91
PDLIM5-213ENST00000509357 A0A0A0MQY5 61 aa3.14□□□□□ -1.91
PDLIM5-213ENST00000509357 MT1GP13640 62 aa3.14□□□□□ -1.91
PDLIM5-213ENST00000509357 CDC42SE1Q9NRR8 79 aa3.13□□□□□ -1.91
PDLIM5-213ENST00000509357 MT1LQ93083 61 aa3.12□□□□□ -1.91
PDLIM5-213ENST00000509357 GPR98Q8WXG9 6306 aa3.11□□□□□ -1.91
PDLIM5-213ENST00000509357 KRTAP25-1Q3LHN0 102 aa3.08□□□□□ -1.92
PDLIM5-213ENST00000509357 MT1MQ8N339 61 aa3.08□□□□□ -1.92
PDLIM5-213ENST00000509357 K7ERS5 55 aa3.07□□□□□ -1.92
PDLIM5-213ENST00000509357 KRTAP4-3Q9BYR4 195 aa3.06□□□□□ -1.92
PDLIM5-213ENST00000509357 KRTAP12-3P60328 96 aa3.05□□□□□ -1.92
PDLIM5-213ENST00000509357 ROMO1P60602 79 aa3.02□□□□□ -1.93
PDLIM5-213ENST00000509357 KRTAP4-11Q9BYQ6 195 aa3.01□□□□□ -1.93
PDLIM5-213ENST00000509357 HMCN1Q96RW7 5635 aa2.99□□□□□ -1.93
PDLIM5-213ENST00000509357 MT4P47944 62 aa2.99□□□□□ -1.93
PDLIM5-213ENST00000509357 KRTAP19-4Q3LI73 84 aa2.99□□□□□ -1.93
PDLIM5-213ENST00000509357 LCE4AQ5TA78 99 aa2.99□□□□□ -1.93
PDLIM5-213ENST00000509357 KRTAP23-1A1A580 65 aa2.98□□□□□ -1.93
PDLIM5-213ENST00000509357 BRK1Q8WUW1 75 aa2.95□□□□□ -1.94
PDLIM5-213ENST00000509357 PRO0628Q9UI54 55 aa2.95□□□□□ -1.94
PDLIM5-213ENST00000509357 KRTAP15-1Q3LI76 137 aa2.9□□□□□ -1.95
PDLIM5-213ENST00000509357 KRTAP5-4Q6L8H1 288 aa2.9□□□□□ -1.95
PDLIM5-213ENST00000509357 AHNAK2Q8IVF2 5795 aa2.9□□□□□ -1.95
PDLIM5-213ENST00000509357 LCE3CQ5T5A8 94 aa2.84□□□□□ -1.95
PDLIM5-213ENST00000509357 KRTAP5-5Q701N2 237 aaPredicted RBP2.84□□□□□ -1.95
PDLIM5-213ENST00000509357 PMAIP1Q13794 54 aa2.82□□□□□ -1.96
PDLIM5-213ENST00000509357 KRTAP9-6A8MVA2 160 aa2.81□□□□□ -1.96
PDLIM5-213ENST00000509357 KRTAP12-4P60329 112 aa2.79□□□□□ -1.96
PDLIM5-213ENST00000509357 KRTAP20-2Q3LI61 65 aa2.76□□□□□ -1.97
PDLIM5-213ENST00000509357 SPRR5A0A1B0GTR4 108 aa2.75□□□□□ -1.97
PDLIM5-213ENST00000509357 SYNE1Q8NF91 8797 aaKnown RBP2.75□□□□□ -1.97
PDLIM5-213ENST00000509357 KRTAP5-10Q6L8G5 202 aa2.74□□□□□ -1.97
PDLIM5-213ENST00000509357 PRAC1Q96KF2 57 aa2.74□□□□□ -1.97
PDLIM5-213ENST00000509357 KRTAP6-1Q3LI64 71 aa2.66□□□□□ -1.98
PDLIM5-213ENST00000509357 MT1AP04731 61 aa2.63□□□□□ -1.99
PDLIM5-213ENST00000509357 KRTAP5-7Q6L8G8 165 aa2.63□□□□□ -1.99
PDLIM5-213ENST00000509357 KTN1-AS1Q86SY8 53 aa2.62□□□□□ -1.99
PDLIM5-213ENST00000509357 KRTAP5-2Q701N4 177 aa2.53□□□□□ -2
PDLIM5-213ENST00000509357 KRTAP6-2Q3LI66 62 aa2.51□□□□□ -2.01
PDLIM5-213ENST00000509357 OBSCNQ5VST9 7968 aa2.5□□□□□ -2.01
PDLIM5-213ENST00000509357 MT3P25713 68 aa2.43□□□□□ -2.02
PDLIM5-213ENST00000509357 AHNAKQ09666 5890 aaKnown RBP2.43□□□□□ -2.02
PDLIM5-213ENST00000509357 LUZP6Q538Z0 58 aa2.42□□□□□ -2.02
PDLIM5-213ENST00000509357 KRTAP5-8O75690 187 aa2.41□□□□□ -2.02
PDLIM5-213ENST00000509357 MUC5BQ9HC84 5762 aaPredicted RBP2.38□□□□□ -2.03
PDLIM5-213ENST00000509357 MUC5ACP98088 5654 aa2.37□□□□□ -2.03
PDLIM5-213ENST00000509357 NDUFAF8A1L188 74 aa2.28□□□□□ -2.04
PDLIM5-213ENST00000509357 KRTAP5-1Q6L8H4 278 aa2.27□□□□□ -2.05
PDLIM5-213ENST00000509357 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.24□□□□□ -2.05
PDLIM5-213ENST00000509357 LCE1EQ5T753 118 aa2.2□□□□□ -2.06
PDLIM5-213ENST00000509357 LCE1BQ5T7P3 118 aa2.13□□□□□ -2.07
PDLIM5-213ENST00000509357 LCE1CQ5T751 118 aa2.04□□□□□ -2.08
PDLIM5-213ENST00000509357 KRTAP5-11Q6L8G4 156 aa2.04□□□□□ -2.08
PDLIM5-213ENST00000509357 LCE3DQ9BYE3 92 aa2.04□□□□□ -2.08
PDLIM5-213ENST00000509357 LCE3EQ5T5B0 92 aa1.95□□□□□ -2.1
PDLIM5-213ENST00000509357 INE1O15225 51 aa1.93□□□□□ -2.1
PDLIM5-213ENST00000509357 KRTAP4-4Q9BYR3 166 aa1.91□□□□□ -2.1
PDLIM5-213ENST00000509357 LCE1FQ5T754 118 aa1.8□□□□□ -2.12
PDLIM5-213ENST00000509357 KRTAP21-2Q3LI59 83 aa1.76□□□□□ -2.13
PDLIM5-213ENST00000509357 PHGR1C9JFL3 82 aa1.64□□□□□ -2.15
PDLIM5-213ENST00000509357 PRM1P04553 51 aa1.6□□□□□ -2.15
PDLIM5-213ENST00000509357 MUC19Q7Z5P9 8384 aa1.54□□□□□ -2.16
PDLIM5-213ENST00000509357 KRTAP21-1Q3LI58 79 aa1.24□□□□□ -2.21
PDLIM5-213ENST00000509357 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 63.1 ms