RNA–Protein interactions for RNA: ENST00000509354.1

TRIO-213, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 801 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-213ENST00000509354 K7ERS5 55 aa3.11□□□□□ -1.91
TRIO-213ENST00000509354 MUC12Q9UKN1 5478 aa3.1□□□□□ -1.91
TRIO-213ENST00000509354 KTN1-AS1Q86SY8 53 aa3.09□□□□□ -1.91
TRIO-213ENST00000509354 NEBP20929 6669 aa3.07□□□□□ -1.92
TRIO-213ENST00000509354 KMT2DO14686 5537 aa3.06□□□□□ -1.92
TRIO-213ENST00000509354 ROMO1P60602 79 aa3.05□□□□□ -1.92
TRIO-213ENST00000509354 LINC01554Q52M75 96 aa3.05□□□□□ -1.92
TRIO-213ENST00000509354 SPINT4Q6UDR6 99 aa3.05□□□□□ -1.92
TRIO-213ENST00000509354 MDN1Q9NU22 5596 aa3.05□□□□□ -1.92
TRIO-213ENST00000509354 MT1XP80297 61 aa3.04□□□□□ -1.92
TRIO-213ENST00000509354 LCE3CQ5T5A8 94 aa3.04□□□□□ -1.92
TRIO-213ENST00000509354 KRTAP5-11Q6L8G4 156 aa3.04□□□□□ -1.92
TRIO-213ENST00000509354 C10orf95Q9H7T3 257 aa3.02□□□□□ -1.93
TRIO-213ENST00000509354 KRTAP5-9P26371 169 aa3.01□□□□□ -1.93
TRIO-213ENST00000509354 KRTAP20-1Q3LI63 56 aa2.99□□□□□ -1.93
TRIO-213ENST00000509354 PLAC4Q8WY50 150 aa2.99□□□□□ -1.93
TRIO-213ENST00000509354 PRO2289Q9P1D8 64 aa2.97□□□□□ -1.93
TRIO-213ENST00000509354 KRTAP25-1Q3LHN0 102 aa2.95□□□□□ -1.94
TRIO-213ENST00000509354 CAMK2N1Q7Z7J9 78 aa2.95□□□□□ -1.94
TRIO-213ENST00000509354 SPRR2FQ96RM1 72 aa2.93□□□□□ -1.94
TRIO-213ENST00000509354 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.91□□□□□ -1.94
TRIO-213ENST00000509354 KRTAP8-1Q8IUC2 63 aa2.91□□□□□ -1.94
TRIO-213ENST00000509354 SPRR2EP22531 72 aa2.9□□□□□ -1.95
TRIO-213ENST00000509354 SPRR2BP35325 72 aa2.9□□□□□ -1.95
TRIO-213ENST00000509354 SPRR2AP35326 72 aa2.9□□□□□ -1.95
TRIO-213ENST00000509354 GPR98Q8WXG9 6306 aa2.87□□□□□ -1.95
TRIO-213ENST00000509354 TNP1P09430 55 aa2.87□□□□□ -1.95
TRIO-213ENST00000509354 KRTAP9-6A8MVA2 160 aa2.86□□□□□ -1.95
TRIO-213ENST00000509354 PP632Q6XCG6 107 aa2.86□□□□□ -1.95
TRIO-213ENST00000509354 KRTAP2-3P0C7H8 128 aa2.82□□□□□ -1.96
TRIO-213ENST00000509354 KRTAP2-4Q9BYR9 128 aa2.82□□□□□ -1.96
TRIO-213ENST00000509354 SPRR2DP22532 72 aa2.8□□□□□ -1.96
TRIO-213ENST00000509354 LCE3AQ5TA76 89 aa2.77□□□□□ -1.97
TRIO-213ENST00000509354 LCE3EQ5T5B0 92 aa2.76□□□□□ -1.97
TRIO-213ENST00000509354 KRTAP2-1Q9BYU5 128 aa2.72□□□□□ -1.97
TRIO-213ENST00000509354 KRTAP19-7Q3SYF9 63 aa2.71□□□□□ -1.98
TRIO-213ENST00000509354 MT1EP04732 61 aa2.68□□□□□ -1.98
TRIO-213ENST00000509354 KRTAP12-3P60328 96 aa2.67□□□□□ -1.98
TRIO-213ENST00000509354 KRTAP19-5Q3LI72 72 aa2.64□□□□□ -1.99
TRIO-213ENST00000509354 KRTAP19-3Q7Z4W3 81 aa2.64□□□□□ -1.99
TRIO-213ENST00000509354 DSTQ03001 7570 aaKnown RBP2.64□□□□□ -1.99
TRIO-213ENST00000509354 SPRR5A0A1B0GTR4 108 aa2.63□□□□□ -1.99
TRIO-213ENST00000509354 MT1MQ8N339 61 aa2.56□□□□□ -2
TRIO-213ENST00000509354 MT1LQ93083 61 aa2.56□□□□□ -2
TRIO-213ENST00000509354 MT1GP13640 62 aa2.55□□□□□ -2
TRIO-213ENST00000509354 KRTAP5-1Q6L8H4 278 aa2.55□□□□□ -2
TRIO-213ENST00000509354 KRTAP4-3Q9BYR4 195 aa2.54□□□□□ -2
TRIO-213ENST00000509354 HMCN1Q96RW7 5635 aa2.51□□□□□ -2.01
TRIO-213ENST00000509354 AHNAK2Q8IVF2 5795 aa2.49□□□□□ -2.01
TRIO-213ENST00000509354 MT4P47944 62 aa2.46□□□□□ -2.02
TRIO-213ENST00000509354 KRTAP5-4Q6L8H1 288 aa2.41□□□□□ -2.02
TRIO-213ENST00000509354 KRTAP5-7Q6L8G8 165 aa2.4□□□□□ -2.03
TRIO-213ENST00000509354 KRTAP4-4Q9BYR3 166 aa2.39□□□□□ -2.03
TRIO-213ENST00000509354 KRTAP5-10Q6L8G5 202 aa2.38□□□□□ -2.03
TRIO-213ENST00000509354 LUZP6Q538Z0 58 aa2.35□□□□□ -2.03
TRIO-213ENST00000509354 KRTAP5-5Q701N2 237 aaPredicted RBP2.34□□□□□ -2.03
TRIO-213ENST00000509354 LCE3DQ9BYE3 92 aa2.31□□□□□ -2.04
TRIO-213ENST00000509354 KRTAP20-2Q3LI61 65 aa2.29□□□□□ -2.04
TRIO-213ENST00000509354 OBSCNQ5VST9 7968 aa2.28□□□□□ -2.05
TRIO-213ENST00000509354 SYNE1Q8NF91 8797 aaKnown RBP2.26□□□□□ -2.05
TRIO-213ENST00000509354 AHNAKQ09666 5890 aaKnown RBP2.24□□□□□ -2.05
TRIO-213ENST00000509354 KRTAP12-4P60329 112 aa2.23□□□□□ -2.05
TRIO-213ENST00000509354 KRTAP6-1Q3LI64 71 aa2.18□□□□□ -2.06
TRIO-213ENST00000509354 MT1AP04731 61 aa2.17□□□□□ -2.06
TRIO-213ENST00000509354 LCE1CQ5T751 118 aa2.17□□□□□ -2.06
TRIO-213ENST00000509354 LCE1BQ5T7P3 118 aa2.17□□□□□ -2.06
TRIO-213ENST00000509354 KRTAP5-2Q701N4 177 aa2.13□□□□□ -2.07
TRIO-213ENST00000509354 MUC5BQ9HC84 5762 aaPredicted RBP2.12□□□□□ -2.07
TRIO-213ENST00000509354 MUC5ACP98088 5654 aa2.1□□□□□ -2.07
TRIO-213ENST00000509354 KRTAP6-2Q3LI66 62 aa2.07□□□□□ -2.08
TRIO-213ENST00000509354 KRTAP5-8O75690 187 aa2.02□□□□□ -2.09
TRIO-213ENST00000509354 INE1O15225 51 aa2.01□□□□□ -2.09
TRIO-213ENST00000509354 MUC19Q7Z5P9 8384 aa1.67□□□□□ -2.14
TRIO-213ENST00000509354 PRM1P04553 51 aa1.57□□□□□ -2.16
TRIO-213ENST00000509354 KRTAP21-2Q3LI59 83 aa1.48□□□□□ -2.17
TRIO-213ENST00000509354 PHGR1C9JFL3 82 aa1.4□□□□□ -2.19
TRIO-213ENST00000509354 KRTAP21-1Q3LI58 79 aa1.12□□□□□ -2.23
TRIO-213ENST00000509354 MUC16Q8WXI7 14507 aa0.86□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 116 ms