RNA–Protein interactions for RNA: ENST00000509178.5

DDX46-208, Transcript of DEAD-box helicase 46, human

TSL 5

Gene DDX46, Length 766 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX46-208	ENST00000509178	RNF213	Q63HN8	5207 aa		1.08	□□□□□ -2.24
DDX46-208	ENST00000509178	FAT3	Q8TDW7	4589 aa		1.08	□□□□□ -2.24
DDX46-208	ENST00000509178	TNXB	P22105	4242 aa		1.07	□□□□□ -2.24
DDX46-208	ENST00000509178	HMCN2	Q8NDA2	5059 aa		1.07	□□□□□ -2.24
DDX46-208	ENST00000509178	SPINK6	Q6UWN8	80 aa		1.06	□□□□□ -2.24
DDX46-208	ENST00000509178	CLPSL2	Q6UWE3	100 aa		1.05	□□□□□ -2.24
DDX46-208	ENST00000509178	SMIM2	Q9BVW6	85 aa		1.04	□□□□□ -2.24
DDX46-208	ENST00000509178	MUC2	Q02817	5179 aa		1.03	□□□□□ -2.24
DDX46-208	ENST00000509178	LRP2	P98164	4655 aa		1.03	□□□□□ -2.24
DDX46-208	ENST00000509178		A0A096LNI7	61 aa		1.03	□□□□□ -2.24
DDX46-208	ENST00000509178		M0QY20	66 aa		1.03	□□□□□ -2.24
DDX46-208	ENST00000509178	GPR98	Q8WXG9	6306 aa		1.02	□□□□□ -2.25
DDX46-208	ENST00000509178	FSIP2	Q5CZC0	6907 aa		1.02	□□□□□ -2.25
DDX46-208	ENST00000509178	LPA	P08519	4548 aa		1.02	□□□□□ -2.25
DDX46-208	ENST00000509178		S4R3F8	94 aa		1.02	□□□□□ -2.25
DDX46-208	ENST00000509178	RPL39L	Q96EH5	51 aa	Known RBP	1.01	□□□□□ -2.25
DDX46-208	ENST00000509178	NDUFA1	O15239	70 aa		0.99	□□□□□ -2.25
DDX46-208	ENST00000509178	POLR2K	P53803	58 aa	Known RBP	0.99	□□□□□ -2.25
DDX46-208	ENST00000509178	MUC17	Q685J3	4493 aa		0.98	□□□□□ -2.25
DDX46-208	ENST00000509178	FAT4	Q6V0I7	4981 aa		0.98	□□□□□ -2.25
DDX46-208	ENST00000509178	RPL39	P62891	51 aa	Known RBP	0.96	□□□□□ -2.26
DDX46-208	ENST00000509178	TOMM7	Q9P0U1	55 aa		0.96	□□□□□ -2.26
DDX46-208	ENST00000509178	SYNE2	Q8WXH0	6885 aa	Known RBP	0.95	□□□□□ -2.26
DDX46-208	ENST00000509178	SPINK1	P00995	79 aa		0.95	□□□□□ -2.26
DDX46-208	ENST00000509178	PRLH	P81277	87 aa		0.94	□□□□□ -2.26
DDX46-208	ENST00000509178		M0R2T5	61 aa		0.93	□□□□□ -2.26
DDX46-208	ENST00000509178	MT1H	P80294	61 aa		0.93	□□□□□ -2.26
DDX46-208	ENST00000509178	KRTAP19-2	Q3LHN2	52 aa		0.93	□□□□□ -2.26
DDX46-208	ENST00000509178	RPS29	P62273	56 aa	Known RBP	0.92	□□□□□ -2.26
DDX46-208	ENST00000509178	FLG	P20930	4061 aa	Predicted RBP	0.91	□□□□□ -2.26
DDX46-208	ENST00000509178	MACF1	Q9UPN3	7388 aa	Known RBP	0.91	□□□□□ -2.26
DDX46-208	ENST00000509178	C9orf92	A6NGG3	77 aa		0.9	□□□□□ -2.27
DDX46-208	ENST00000509178	PRM1	P04553	51 aa		0.88	□□□□□ -2.27
DDX46-208	ENST00000509178	USH2A	O75445	5202 aa		0.88	□□□□□ -2.27
DDX46-208	ENST00000509178	NEB	P20929	6669 aa		0.87	□□□□□ -2.27
DDX46-208	ENST00000509178	IGLV5-48	A0A075B6I7	105 aa		0.87	□□□□□ -2.27
DDX46-208	ENST00000509178	MMP24-AS1	A0A0U1RRL7	71 aa		0.86	□□□□□ -2.27
DDX46-208	ENST00000509178	SSPO	A2VEC9	5147 aa		0.86	□□□□□ -2.27
DDX46-208	ENST00000509178	MT2A	P02795	61 aa		0.85	□□□□□ -2.27
DDX46-208	ENST00000509178	MT1F	P04733	61 aa		0.84	□□□□□ -2.27
DDX46-208	ENST00000509178	KRTAP19-6	Q3LI70	58 aa		0.83	□□□□□ -2.28
DDX46-208	ENST00000509178	MUC5B	Q9HC84	5762 aa	Predicted RBP	0.82	□□□□□ -2.28
DDX46-208	ENST00000509178	KRTAP20-1	Q3LI63	56 aa		0.81	□□□□□ -2.28
DDX46-208	ENST00000509178	KRTAP5-10	Q6L8G5	202 aa		0.81	□□□□□ -2.28
DDX46-208	ENST00000509178	KRTAP21-1	Q3LI58	79 aa		0.79	□□□□□ -2.28
DDX46-208	ENST00000509178	MUC12	Q9UKN1	5478 aa		0.78	□□□□□ -2.28
DDX46-208	ENST00000509178	MUC16	Q8WXI7	14507 aa		0.78	□□□□□ -2.28
DDX46-208	ENST00000509178	MDN1	Q9NU22	5596 aa		0.75	□□□□□ -2.29
DDX46-208	ENST00000509178	AHNAK	Q09666	5890 aa	Known RBP	0.75	□□□□□ -2.29
DDX46-208	ENST00000509178	MT1B	P07438	61 aa		0.75	□□□□□ -2.29
DDX46-208	ENST00000509178	KMT2D	O14686	5537 aa		0.75	□□□□□ -2.29
DDX46-208	ENST00000509178	SPRR2E	P22531	72 aa		0.74	□□□□□ -2.29
DDX46-208	ENST00000509178	SPRR2B	P35325	72 aa		0.74	□□□□□ -2.29
DDX46-208	ENST00000509178	SPRR2A	P35326	72 aa		0.74	□□□□□ -2.29
DDX46-208	ENST00000509178	KRTAP19-8	Q3LI54	63 aa		0.74	□□□□□ -2.29
DDX46-208	ENST00000509178	SPRR2F	Q96RM1	72 aa		0.74	□□□□□ -2.29
DDX46-208	ENST00000509178	SPRR2G	Q9BYE4	73 aa		0.74	□□□□□ -2.29
DDX46-208	ENST00000509178	SYNE1	Q8NF91	8797 aa	Known RBP	0.74	□□□□□ -2.29
DDX46-208	ENST00000509178	DST	Q03001	7570 aa	Known RBP	0.73	□□□□□ -2.29
DDX46-208	ENST00000509178	SPRR2D	P22532	72 aa		0.71	□□□□□ -2.3
DDX46-208	ENST00000509178	KRTAP8-1	Q8IUC2	63 aa		0.71	□□□□□ -2.3
DDX46-208	ENST00000509178	MT1X	P80297	61 aa		0.69	□□□□□ -2.3
DDX46-208	ENST00000509178	AHNAK2	Q8IVF2	5795 aa		0.66	□□□□□ -2.3
DDX46-208	ENST00000509178		M0QZ58	72 aa		0.65	□□□□□ -2.31
DDX46-208	ENST00000509178	MT4	P47944	62 aa		0.64	□□□□□ -2.31
DDX46-208	ENST00000509178	MT1E	P04732	61 aa		0.63	□□□□□ -2.31
DDX46-208	ENST00000509178	KRTAP19-7	Q3SYF9	63 aa		0.63	□□□□□ -2.31
DDX46-208	ENST00000509178	MT1G	P13640	62 aa		0.61	□□□□□ -2.31
DDX46-208	ENST00000509178	KRTAP19-5	Q3LI72	72 aa		0.6	□□□□□ -2.31
DDX46-208	ENST00000509178	MT1M	Q8N339	61 aa		0.6	□□□□□ -2.31
DDX46-208	ENST00000509178	MT1L	Q93083	61 aa		0.58	□□□□□ -2.32
DDX46-208	ENST00000509178	MUC5AC	P98088	5654 aa		0.58	□□□□□ -2.32
DDX46-208	ENST00000509178	TNP1	P09430	55 aa		0.57	□□□□□ -2.32
DDX46-208	ENST00000509178	KRTAP20-2	Q3LI61	65 aa		0.57	□□□□□ -2.32
DDX46-208	ENST00000509178	KRTAP6-2	Q3LI66	62 aa		0.53	□□□□□ -2.32
DDX46-208	ENST00000509178	MT1A	P04731	61 aa		0.5	□□□□□ -2.33
DDX46-208	ENST00000509178	KRTAP6-1	Q3LI64	71 aa		0.49	□□□□□ -2.33
DDX46-208	ENST00000509178	PHGR1	C9JFL3	82 aa		0.47	□□□□□ -2.33

Retrieved 78 of 20,778 RNA–protein pairs in 72.3 ms