RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 PMAIP1Q13794 54 aa4.19□□□□□ -1.74
RFC1-211ENST00000509084 KRTAP25-1Q3LHN0 102 aa4.17□□□□□ -1.74
RFC1-211ENST00000509084 KRTAP2-2Q9BYT5 123 aa4.16□□□□□ -1.74
RFC1-211ENST00000509084 KRTAP10-7P60409 375 aaPredicted RBP4.12□□□□□ -1.75
RFC1-211ENST00000509084 KRTAP10-12P60413 245 aa4.12□□□□□ -1.75
RFC1-211ENST00000509084 KRTAP6-3Q3LI67 103 aa4.12□□□□□ -1.75
RFC1-211ENST00000509084 MT3P25713 68 aa4.07□□□□□ -1.76
RFC1-211ENST00000509084 PRAC1Q96KF2 57 aa4.04□□□□□ -1.76
RFC1-211ENST00000509084 PP632Q6XCG6 107 aa4.01□□□□□ -1.77
RFC1-211ENST00000509084 KTN1-AS1Q86SY8 53 aa3.99□□□□□ -1.77
RFC1-211ENST00000509084 NEBP20929 6669 aa3.98□□□□□ -1.77
RFC1-211ENST00000509084 KRTAP20-1Q3LI63 56 aa3.98□□□□□ -1.77
RFC1-211ENST00000509084 LCE3AQ5TA76 89 aa3.98□□□□□ -1.77
RFC1-211ENST00000509084 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.98□□□□□ -1.77
RFC1-211ENST00000509084 KRTAP8-1Q8IUC2 63 aa3.98□□□□□ -1.77
RFC1-211ENST00000509084 LCE1EQ5T753 118 aa3.88□□□□□ -1.79
RFC1-211ENST00000509084 KRTAP5-11Q6L8G4 156 aa3.88□□□□□ -1.79
RFC1-211ENST00000509084 KRTAP5-9P26371 169 aa3.87□□□□□ -1.79
RFC1-211ENST00000509084 KRTAP19-5Q3LI72 72 aa3.86□□□□□ -1.79
RFC1-211ENST00000509084 KMT2DO14686 5537 aa3.86□□□□□ -1.79
RFC1-211ENST00000509084 KRTAP12-3P60328 96 aa3.85□□□□□ -1.79
RFC1-211ENST00000509084 KRTAP19-7Q3SYF9 63 aa3.85□□□□□ -1.79
RFC1-211ENST00000509084 SPRR2FQ96RM1 72 aa3.85□□□□□ -1.79
RFC1-211ENST00000509084 MUC12Q9UKN1 5478 aa3.83□□□□□ -1.8
RFC1-211ENST00000509084 MT1EP04732 61 aa3.81□□□□□ -1.8
RFC1-211ENST00000509084 KRTAP2-3P0C7H8 128 aa3.8□□□□□ -1.8
RFC1-211ENST00000509084 KRTAP2-4Q9BYR9 128 aa3.8□□□□□ -1.8
RFC1-211ENST00000509084 NDUFAF8A1L188 74 aa3.72□□□□□ -1.81
RFC1-211ENST00000509084 KRTAP19-3Q7Z4W3 81 aa3.71□□□□□ -1.82
RFC1-211ENST00000509084 MT1LQ93083 61 aa3.71□□□□□ -1.82
RFC1-211ENST00000509084 SPRR2EP22531 72 aa3.7□□□□□ -1.82
RFC1-211ENST00000509084 SPRR2BP35325 72 aa3.7□□□□□ -1.82
RFC1-211ENST00000509084 SPRR2AP35326 72 aa3.7□□□□□ -1.82
RFC1-211ENST00000509084 MT1GP13640 62 aa3.67□□□□□ -1.82
RFC1-211ENST00000509084 MDN1Q9NU22 5596 aa3.66□□□□□ -1.82
RFC1-211ENST00000509084 KRTAP2-1Q9BYU5 128 aa3.66□□□□□ -1.82
RFC1-211ENST00000509084 MT1MQ8N339 61 aa3.6□□□□□ -1.83
RFC1-211ENST00000509084 LCE3CQ5T5A8 94 aa3.58□□□□□ -1.84
RFC1-211ENST00000509084 SPRR2DP22532 72 aa3.57□□□□□ -1.84
RFC1-211ENST00000509084 LCE1FQ5T754 118 aa3.52□□□□□ -1.85
RFC1-211ENST00000509084 GPR98Q8WXG9 6306 aa3.48□□□□□ -1.85
RFC1-211ENST00000509084 KRTAP4-3Q9BYR4 195 aa3.45□□□□□ -1.86
RFC1-211ENST00000509084 SPRR5A0A1B0GTR4 108 aa3.44□□□□□ -1.86
RFC1-211ENST00000509084 KRTAP5-1Q6L8H4 278 aa3.42□□□□□ -1.86
RFC1-211ENST00000509084 KRTAP9-6A8MVA2 160 aa3.4□□□□□ -1.87
RFC1-211ENST00000509084 KRTAP5-4Q6L8H1 288 aa3.35□□□□□ -1.87
RFC1-211ENST00000509084 DSTQ03001 7570 aaKnown RBP3.32□□□□□ -1.88
RFC1-211ENST00000509084 LUZP6Q538Z0 58 aa3.3□□□□□ -1.88
RFC1-211ENST00000509084 KRTAP4-4Q9BYR3 166 aa3.3□□□□□ -1.88
RFC1-211ENST00000509084 KRTAP5-5Q701N2 237 aaPredicted RBP3.26□□□□□ -1.89
RFC1-211ENST00000509084 MT1AP04731 61 aa3.18□□□□□ -1.9
RFC1-211ENST00000509084 KRTAP12-4P60329 112 aa3.1□□□□□ -1.91
RFC1-211ENST00000509084 KRTAP6-1Q3LI64 71 aa3.1□□□□□ -1.91
RFC1-211ENST00000509084 KRTAP5-10Q6L8G5 202 aa3.09□□□□□ -1.91
RFC1-211ENST00000509084 MT4P47944 62 aa3.08□□□□□ -1.92
RFC1-211ENST00000509084 HMCN1Q96RW7 5635 aa3.08□□□□□ -1.92
RFC1-211ENST00000509084 LCE3EQ5T5B0 92 aa3.03□□□□□ -1.92
RFC1-211ENST00000509084 KRTAP5-7Q6L8G8 165 aa3.03□□□□□ -1.92
RFC1-211ENST00000509084 AHNAK2Q8IVF2 5795 aa3.03□□□□□ -1.92
RFC1-211ENST00000509084 OBSCNQ5VST9 7968 aa2.99□□□□□ -1.93
RFC1-211ENST00000509084 KRTAP20-2Q3LI61 65 aa2.99□□□□□ -1.93
RFC1-211ENST00000509084 SYNE1Q8NF91 8797 aaKnown RBP2.92□□□□□ -1.94
RFC1-211ENST00000509084 KRTAP6-2Q3LI66 62 aa2.88□□□□□ -1.95
RFC1-211ENST00000509084 KRTAP5-2Q701N4 177 aa2.87□□□□□ -1.95
RFC1-211ENST00000509084 LCE3DQ9BYE3 92 aa2.68□□□□□ -1.98
RFC1-211ENST00000509084 AHNAKQ09666 5890 aaKnown RBP2.64□□□□□ -1.99
RFC1-211ENST00000509084 MUC5ACP98088 5654 aa2.6□□□□□ -1.99
RFC1-211ENST00000509084 INE1O15225 51 aa2.56□□□□□ -2
RFC1-211ENST00000509084 KRTAP5-8O75690 187 aa2.56□□□□□ -2
RFC1-211ENST00000509084 MUC5BQ9HC84 5762 aaPredicted RBP2.55□□□□□ -2
RFC1-211ENST00000509084 LCE1CQ5T751 118 aa2.55□□□□□ -2
RFC1-211ENST00000509084 LCE1BQ5T7P3 118 aa2.55□□□□□ -2
RFC1-211ENST00000509084 PRM1P04553 51 aa2.16□□□□□ -2.06
RFC1-211ENST00000509084 MUC19Q7Z5P9 8384 aa2.05□□□□□ -2.08
RFC1-211ENST00000509084 KRTAP21-2Q3LI59 83 aa2.03□□□□□ -2.08
RFC1-211ENST00000509084 PHGR1C9JFL3 82 aa1.84□□□□□ -2.11
RFC1-211ENST00000509084 KRTAP21-1Q3LI58 79 aa1.42□□□□□ -2.18
RFC1-211ENST00000509084 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 36.1 ms