RNA–Protein interactions for RNA: ENST00000508828.1

SPSB4-204, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

TSL 3

Gene SPSB4, Length 537 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-204ENST00000508828 KRTAP5-9P26371 169 aa4.87□□□□□ -1.63
SPSB4-204ENST00000508828 KRTAP2-4Q9BYR9 128 aa4.87□□□□□ -1.63
SPSB4-204ENST00000508828 KRTAP19-7Q3SYF9 63 aa4.86□□□□□ -1.63
SPSB4-204ENST00000508828 MT1EP04732 61 aa4.8□□□□□ -1.64
SPSB4-204ENST00000508828 KRTAP19-4Q3LI73 84 aa4.73□□□□□ -1.65
SPSB4-204ENST00000508828 SPRR5A0A1B0GTR4 108 aa4.72□□□□□ -1.65
SPSB4-204ENST00000508828 SPRR2FQ96RM1 72 aa4.72□□□□□ -1.65
SPSB4-204ENST00000508828 MT1LQ93083 61 aa4.7□□□□□ -1.66
SPSB4-204ENST00000508828 KRTAP2-2Q9BYT5 123 aa4.69□□□□□ -1.66
SPSB4-204ENST00000508828 KRTAP2-1Q9BYU5 128 aa4.69□□□□□ -1.66
SPSB4-204ENST00000508828 GPR98Q8WXG9 6306 aa4.67□□□□□ -1.66
SPSB4-204ENST00000508828 SPRR2EP22531 72 aa4.67□□□□□ -1.66
SPSB4-204ENST00000508828 SPRR2BP35325 72 aa4.67□□□□□ -1.66
SPSB4-204ENST00000508828 SPRR2AP35326 72 aa4.67□□□□□ -1.66
SPSB4-204ENST00000508828 LCE3CQ5T5A8 94 aa4.66□□□□□ -1.66
SPSB4-204ENST00000508828 LUZP6Q538Z0 58 aa4.64□□□□□ -1.67
SPSB4-204ENST00000508828 KRTAP19-3Q7Z4W3 81 aa4.61□□□□□ -1.67
SPSB4-204ENST00000508828 MT1GP13640 62 aa4.57□□□□□ -1.68
SPSB4-204ENST00000508828 LCE1AQ5T7P2 110 aa4.56□□□□□ -1.68
SPSB4-204ENST00000508828 SPRR2DP22532 72 aa4.53□□□□□ -1.68
SPSB4-204ENST00000508828 MT1MQ8N339 61 aa4.52□□□□□ -1.69
SPSB4-204ENST00000508828 NDUFAF8A1L188 74 aa4.51□□□□□ -1.69
SPSB4-204ENST00000508828 KRTAP4-7Q9BYR0 210 aa4.51□□□□□ -1.69
SPSB4-204ENST00000508828 LCE5AQ5TCM9 118 aa4.5□□□□□ -1.69
SPSB4-204ENST00000508828 LCE3BQ5TA77 95 aa4.4□□□□□ -1.71
SPSB4-204ENST00000508828 KRTAP4-3Q9BYR4 195 aa4.39□□□□□ -1.71
SPSB4-204ENST00000508828 KRTAP9-6A8MVA2 160 aa4.37□□□□□ -1.71
SPSB4-204ENST00000508828 LOC100996750A0A140TA64 210 aa4.23□□□□□ -1.73
SPSB4-204ENST00000508828 KRTAP4-9Q9BYQ8 210 aa4.22□□□□□ -1.73
SPSB4-204ENST00000508828 DSTQ03001 7570 aaKnown RBP4.21□□□□□ -1.74
SPSB4-204ENST00000508828 KRTAP5-10Q6L8G5 202 aa4.09□□□□□ -1.75
SPSB4-204ENST00000508828 AHNAK2Q8IVF2 5795 aa4.09□□□□□ -1.75
SPSB4-204ENST00000508828 HMCN1Q96RW7 5635 aa4.06□□□□□ -1.76
SPSB4-204ENST00000508828 KRTAP5-5Q701N2 237 aaPredicted RBP4.05□□□□□ -1.76
SPSB4-204ENST00000508828 LCE1DQ5T752 114 aa4.04□□□□□ -1.76
SPSB4-204ENST00000508828 A0A0A0MQY5 61 aa4.03□□□□□ -1.76
SPSB4-204ENST00000508828 MT1AP04731 61 aa4.02□□□□□ -1.77
SPSB4-204ENST00000508828 KRTAP5-7Q6L8G8 165 aa4.02□□□□□ -1.77
SPSB4-204ENST00000508828 H3BS24 57 aa4.01□□□□□ -1.77
SPSB4-204ENST00000508828 LCE4AQ5TA78 99 aa4.01□□□□□ -1.77
SPSB4-204ENST00000508828 KRTAP6-1Q3LI64 71 aa3.95□□□□□ -1.78
SPSB4-204ENST00000508828 MT4P47944 62 aa3.93□□□□□ -1.78
SPSB4-204ENST00000508828 SYNE1Q8NF91 8797 aaKnown RBP3.9□□□□□ -1.79
SPSB4-204ENST00000508828 KRTAP5-4Q6L8H1 288 aa3.87□□□□□ -1.79
SPSB4-204ENST00000508828 KRTAP5-3Q6L8H2 238 aa3.83□□□□□ -1.8
SPSB4-204ENST00000508828 KRTAP12-4P60329 112 aa3.79□□□□□ -1.8
SPSB4-204ENST00000508828 KRTAP9-4Q9BYQ2 154 aa3.79□□□□□ -1.8
SPSB4-204ENST00000508828 KRTAP4-6Q9BYQ5 205 aa3.77□□□□□ -1.81
SPSB4-204ENST00000508828 INE1O15225 51 aa3.76□□□□□ -1.81
SPSB4-204ENST00000508828 KRTAP20-2Q3LI61 65 aa3.67□□□□□ -1.82
SPSB4-204ENST00000508828 MT3P25713 68 aa3.64□□□□□ -1.83
SPSB4-204ENST00000508828 KRTAP6-2Q3LI66 62 aa3.63□□□□□ -1.83
SPSB4-204ENST00000508828 AHNAKQ09666 5890 aaKnown RBP3.56□□□□□ -1.84
SPSB4-204ENST00000508828 KRTAP5-2Q701N4 177 aa3.52□□□□□ -1.85
SPSB4-204ENST00000508828 LCE3DQ9BYE3 92 aa3.52□□□□□ -1.85
SPSB4-204ENST00000508828 MUC5ACP98088 5654 aa3.48□□□□□ -1.85
SPSB4-204ENST00000508828 LCE3EQ5T5B0 92 aa3.44□□□□□ -1.86
SPSB4-204ENST00000508828 MUC5BQ9HC84 5762 aaPredicted RBP3.44□□□□□ -1.86
SPSB4-204ENST00000508828 KRTAP4-11Q9BYQ6 195 aa3.38□□□□□ -1.87
SPSB4-204ENST00000508828 OBSCNQ5VST9 7968 aa3.34□□□□□ -1.88
SPSB4-204ENST00000508828 KRTAP5-8O75690 187 aa3.32□□□□□ -1.88
SPSB4-204ENST00000508828 KRTAP4-12Q9BQ66 201 aa3.24□□□□□ -1.89
SPSB4-204ENST00000508828 KRTAP9-9Q9BYP9 154 aa3.22□□□□□ -1.89
SPSB4-204ENST00000508828 LCE1EQ5T753 118 aa3.14□□□□□ -1.91
SPSB4-204ENST00000508828 KRTAP5-1Q6L8H4 278 aa3.02□□□□□ -1.93
SPSB4-204ENST00000508828 PRM1P04553 51 aa3.01□□□□□ -1.93
SPSB4-204ENST00000508828 LCE1BQ5T7P3 118 aa2.95□□□□□ -1.94
SPSB4-204ENST00000508828 LCE1CQ5T751 118 aa2.92□□□□□ -1.94
SPSB4-204ENST00000508828 KRTAP4-2Q9BYR5 136 aa2.91□□□□□ -1.94
SPSB4-204ENST00000508828 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.74□□□□□ -1.97
SPSB4-204ENST00000508828 KRTAP5-11Q6L8G4 156 aa2.59□□□□□ -1.99
SPSB4-204ENST00000508828 KRTAP21-2Q3LI59 83 aa2.57□□□□□ -2
SPSB4-204ENST00000508828 LCE1FQ5T754 118 aa2.44□□□□□ -2.02
SPSB4-204ENST00000508828 PHGR1C9JFL3 82 aa2.42□□□□□ -2.02
SPSB4-204ENST00000508828 KRTAP4-4Q9BYR3 166 aa2.28□□□□□ -2.04
SPSB4-204ENST00000508828 MUC19Q7Z5P9 8384 aa2.01□□□□□ -2.09
SPSB4-204ENST00000508828 KRTAP21-1Q3LI58 79 aa1.85□□□□□ -2.11
SPSB4-204ENST00000508828 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 56.4 ms