RNA–Protein interactions for RNA: ENST00000508559.1

BRCC3P1-201, Transcript of BRCA1/BRCA2-containing complex subunit 3 pseudogene 1, humanhuman

BASIC

Gene BRCC3P1, Length 951 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P1-201ENST00000508559 KRTAP8-1Q8IUC2 63 aa4.29□□□□□ -1.72
BRCC3P1-201ENST00000508559 LCE3AQ5TA76 89 aa4.23□□□□□ -1.73
BRCC3P1-201ENST00000508559 MACF1Q9UPN3 7388 aaKnown RBP4.21□□□□□ -1.73
BRCC3P1-201ENST00000508559 KMT2DO14686 5537 aa4.21□□□□□ -1.74
BRCC3P1-201ENST00000508559 KRTAP6-3Q3LI67 103 aa4.2□□□□□ -1.74
BRCC3P1-201ENST00000508559 SPRR2FQ96RM1 72 aa4.18□□□□□ -1.74
BRCC3P1-201ENST00000508559 PP632Q6XCG6 107 aa4.16□□□□□ -1.74
BRCC3P1-201ENST00000508559 KRTAP5-9P26371 169 aa4.12□□□□□ -1.75
BRCC3P1-201ENST00000508559 KRTAP19-5Q3LI72 72 aa4.12□□□□□ -1.75
BRCC3P1-201ENST00000508559 SYNE2Q8WXH0 6885 aaKnown RBP4.09□□□□□ -1.75
BRCC3P1-201ENST00000508559 KRTAP12-3P60328 96 aa4.08□□□□□ -1.76
BRCC3P1-201ENST00000508559 KRTAP19-7Q3SYF9 63 aa4.07□□□□□ -1.76
BRCC3P1-201ENST00000508559 KTN1-AS1Q86SY8 53 aa4.05□□□□□ -1.76
BRCC3P1-201ENST00000508559 MT1EP04732 61 aa4.04□□□□□ -1.76
BRCC3P1-201ENST00000508559 PRAC1Q96KF2 57 aa4.04□□□□□ -1.76
BRCC3P1-201ENST00000508559 SPRR2EP22531 72 aa4.03□□□□□ -1.76
BRCC3P1-201ENST00000508559 SPRR2BP35325 72 aa4.03□□□□□ -1.76
BRCC3P1-201ENST00000508559 SPRR2AP35326 72 aa4.03□□□□□ -1.76
BRCC3P1-201ENST00000508559 MUC12Q9UKN1 5478 aa3.98□□□□□ -1.77
BRCC3P1-201ENST00000508559 LCE1AQ5T7P2 110 aa3.96□□□□□ -1.78
BRCC3P1-201ENST00000508559 MDN1Q9NU22 5596 aa3.96□□□□□ -1.78
BRCC3P1-201ENST00000508559 KRTAP19-3Q7Z4W3 81 aa3.94□□□□□ -1.78
BRCC3P1-201ENST00000508559 MT1LQ93083 61 aa3.93□□□□□ -1.78
BRCC3P1-201ENST00000508559 MT1GP13640 62 aa3.9□□□□□ -1.79
BRCC3P1-201ENST00000508559 SPRR2DP22532 72 aa3.9□□□□□ -1.79
BRCC3P1-201ENST00000508559 NEBP20929 6669 aa3.84□□□□□ -1.8
BRCC3P1-201ENST00000508559 MT1MQ8N339 61 aa3.83□□□□□ -1.8
BRCC3P1-201ENST00000508559 LCE3CQ5T5A8 94 aa3.78□□□□□ -1.8
BRCC3P1-201ENST00000508559 KRTAP20-1Q3LI63 56 aa3.75□□□□□ -1.81
BRCC3P1-201ENST00000508559 KRTAP2-3P0C7H8 128 aa3.74□□□□□ -1.81
BRCC3P1-201ENST00000508559 KRTAP2-4Q9BYR9 128 aa3.74□□□□□ -1.81
BRCC3P1-201ENST00000508559 KRTAP4-3Q9BYR4 195 aa3.72□□□□□ -1.81
BRCC3P1-201ENST00000508559 KRTAP2-2Q9BYT5 123 aa3.64□□□□□ -1.83
BRCC3P1-201ENST00000508559 KRTAP2-1Q9BYU5 128 aa3.64□□□□□ -1.83
BRCC3P1-201ENST00000508559 DSTQ03001 7570 aaKnown RBP3.56□□□□□ -1.84
BRCC3P1-201ENST00000508559 SPRR5A0A1B0GTR4 108 aa3.49□□□□□ -1.85
BRCC3P1-201ENST00000508559 KRTAP9-6A8MVA2 160 aa3.49□□□□□ -1.85
BRCC3P1-201ENST00000508559 LUZP6Q538Z0 58 aa3.43□□□□□ -1.86
BRCC3P1-201ENST00000508559 KRTAP5-5Q701N2 237 aaPredicted RBP3.42□□□□□ -1.86
BRCC3P1-201ENST00000508559 MT4P47944 62 aa3.38□□□□□ -1.87
BRCC3P1-201ENST00000508559 KRTAP5-11Q6L8G4 156 aa3.38□□□□□ -1.87
BRCC3P1-201ENST00000508559 KRTAP5-4Q6L8H1 288 aa3.38□□□□□ -1.87
BRCC3P1-201ENST00000508559 MT1AP04731 61 aa3.36□□□□□ -1.87
BRCC3P1-201ENST00000508559 KRTAP12-4P60329 112 aa3.35□□□□□ -1.87
BRCC3P1-201ENST00000508559 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.35□□□□□ -1.87
BRCC3P1-201ENST00000508559 MT3P25713 68 aa3.34□□□□□ -1.87
BRCC3P1-201ENST00000508559 KRTAP6-1Q3LI64 71 aa3.31□□□□□ -1.88
BRCC3P1-201ENST00000508559 LCE1EQ5T753 118 aa3.31□□□□□ -1.88
BRCC3P1-201ENST00000508559 NDUFAF8A1L188 74 aa3.29□□□□□ -1.88
BRCC3P1-201ENST00000508559 HMCN1Q96RW7 5635 aa3.24□□□□□ -1.89
BRCC3P1-201ENST00000508559 KRTAP20-2Q3LI61 65 aa3.2□□□□□ -1.9
BRCC3P1-201ENST00000508559 SYNE1Q8NF91 8797 aaKnown RBP3.19□□□□□ -1.9
BRCC3P1-201ENST00000508559 KRTAP6-2Q3LI66 62 aa3.1□□□□□ -1.91
BRCC3P1-201ENST00000508559 KRTAP5-2Q701N4 177 aa3.02□□□□□ -1.93
BRCC3P1-201ENST00000508559 AHNAK2Q8IVF2 5795 aa3.02□□□□□ -1.93
BRCC3P1-201ENST00000508559 LCE1FQ5T754 118 aa3.01□□□□□ -1.93
BRCC3P1-201ENST00000508559 KRTAP5-1Q6L8H4 278 aa2.92□□□□□ -1.94
BRCC3P1-201ENST00000508559 GPR98Q8WXG9 6306 aa2.85□□□□□ -1.95
BRCC3P1-201ENST00000508559 KRTAP5-10Q6L8G5 202 aa2.85□□□□□ -1.95
BRCC3P1-201ENST00000508559 LCE3DQ9BYE3 92 aa2.83□□□□□ -1.96
BRCC3P1-201ENST00000508559 KRTAP4-4Q9BYR3 166 aa2.78□□□□□ -1.96
BRCC3P1-201ENST00000508559 LCE3EQ5T5B0 92 aa2.72□□□□□ -1.97
BRCC3P1-201ENST00000508559 KRTAP5-8O75690 187 aa2.7□□□□□ -1.98
BRCC3P1-201ENST00000508559 KRTAP5-7Q6L8G8 165 aa2.7□□□□□ -1.98
BRCC3P1-201ENST00000508559 OBSCNQ5VST9 7968 aa2.68□□□□□ -1.98
BRCC3P1-201ENST00000508559 MUC5ACP98088 5654 aa2.61□□□□□ -1.99
BRCC3P1-201ENST00000508559 INE1O15225 51 aa2.58□□□□□ -2
BRCC3P1-201ENST00000508559 LCE1BQ5T7P3 118 aa2.58□□□□□ -2
BRCC3P1-201ENST00000508559 LCE1CQ5T751 118 aa2.5□□□□□ -2.01
BRCC3P1-201ENST00000508559 MUC5BQ9HC84 5762 aaPredicted RBP2.42□□□□□ -2.02
BRCC3P1-201ENST00000508559 AHNAKQ09666 5890 aaKnown RBP2.41□□□□□ -2.02
BRCC3P1-201ENST00000508559 PRM1P04553 51 aa2.26□□□□□ -2.05
BRCC3P1-201ENST00000508559 KRTAP21-2Q3LI59 83 aa2.14□□□□□ -2.07
BRCC3P1-201ENST00000508559 PHGR1C9JFL3 82 aa1.9□□□□□ -2.11
BRCC3P1-201ENST00000508559 MUC19Q7Z5P9 8384 aa1.74□□□□□ -2.13
BRCC3P1-201ENST00000508559 KRTAP21-1Q3LI58 79 aa1.3□□□□□ -2.2
BRCC3P1-201ENST00000508559 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 50 ms