RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 SPRR2EP22531 72 aa3.84□□□□□ -1.79
HTT-204ENST00000508321 SPRR2BP35325 72 aa3.84□□□□□ -1.79
HTT-204ENST00000508321 SPRR2AP35326 72 aa3.84□□□□□ -1.79
HTT-204ENST00000508321 KRTAP19-7Q3SYF9 63 aa3.83□□□□□ -1.8
HTT-204ENST00000508321 KRTAP2-2Q9BYT5 123 aa3.83□□□□□ -1.8
HTT-204ENST00000508321 KRTAP2-1Q9BYU5 128 aa3.83□□□□□ -1.8
HTT-204ENST00000508321 MT1EP04732 61 aa3.79□□□□□ -1.8
HTT-204ENST00000508321 KRTAP19-5Q3LI72 72 aa3.79□□□□□ -1.8
HTT-204ENST00000508321 LCE1AQ5T7P2 110 aa3.79□□□□□ -1.8
HTT-204ENST00000508321 PP632Q6XCG6 107 aa3.77□□□□□ -1.81
HTT-204ENST00000508321 KRTAP12-3P60328 96 aa3.73□□□□□ -1.81
HTT-204ENST00000508321 SPRR2DP22532 72 aa3.72□□□□□ -1.81
HTT-204ENST00000508321 KRTAP19-3Q7Z4W3 81 aa3.72□□□□□ -1.81
HTT-204ENST00000508321 GPR98Q8WXG9 6306 aa3.72□□□□□ -1.81
HTT-204ENST00000508321 LCE5AQ5TCM9 118 aa3.69□□□□□ -1.82
HTT-204ENST00000508321 MT1GP13640 62 aa3.67□□□□□ -1.82
HTT-204ENST00000508321 MT1LQ93083 61 aa3.66□□□□□ -1.82
HTT-204ENST00000508321 KRTAP19-4Q3LI73 84 aa3.64□□□□□ -1.83
HTT-204ENST00000508321 LCE3BQ5TA77 95 aa3.64□□□□□ -1.83
HTT-204ENST00000508321 PRAC1Q96KF2 57 aa3.64□□□□□ -1.83
HTT-204ENST00000508321 MT1MQ8N339 61 aa3.59□□□□□ -1.83
HTT-204ENST00000508321 KRTAP15-1Q3LI76 137 aa3.58□□□□□ -1.84
HTT-204ENST00000508321 DSTQ03001 7570 aaKnown RBP3.52□□□□□ -1.85
HTT-204ENST00000508321 LCE3CQ5T5A8 94 aa3.46□□□□□ -1.86
HTT-204ENST00000508321 KRTAP4-9Q9BYQ8 210 aa3.46□□□□□ -1.86
HTT-204ENST00000508321 KRTAP4-7Q9BYR0 210 aa3.43□□□□□ -1.86
HTT-204ENST00000508321 KRTAP4-3Q9BYR4 195 aa3.42□□□□□ -1.86
HTT-204ENST00000508321 LCE1DQ5T752 114 aa3.37□□□□□ -1.87
HTT-204ENST00000508321 AHNAK2Q8IVF2 5795 aa3.33□□□□□ -1.88
HTT-204ENST00000508321 HMCN1Q96RW7 5635 aa3.32□□□□□ -1.88
HTT-204ENST00000508321 LCE4AQ5TA78 99 aa3.31□□□□□ -1.88
HTT-204ENST00000508321 KRTAP5-10Q6L8G5 202 aa3.31□□□□□ -1.88
HTT-204ENST00000508321 KRTAP5-4Q6L8H1 288 aa3.29□□□□□ -1.88
HTT-204ENST00000508321 KRTAP5-5Q701N2 237 aaPredicted RBP3.28□□□□□ -1.88
HTT-204ENST00000508321 MT4P47944 62 aa3.27□□□□□ -1.89
HTT-204ENST00000508321 LOC100996750A0A140TA64 210 aa3.23□□□□□ -1.89
HTT-204ENST00000508321 KRTAP5-7Q6L8G8 165 aa3.22□□□□□ -1.89
HTT-204ENST00000508321 KRTAP9-6A8MVA2 160 aa3.2□□□□□ -1.9
HTT-204ENST00000508321 LUZP6Q538Z0 58 aa3.18□□□□□ -1.9
HTT-204ENST00000508321 KRTAP4-6Q9BYQ5 205 aa3.17□□□□□ -1.9
HTT-204ENST00000508321 SPRR5A0A1B0GTR4 108 aa3.16□□□□□ -1.9
HTT-204ENST00000508321 MT1AP04731 61 aa3.15□□□□□ -1.91
HTT-204ENST00000508321 KRTAP5-3Q6L8H2 238 aa3.15□□□□□ -1.91
HTT-204ENST00000508321 KRTAP12-4P60329 112 aa3.14□□□□□ -1.91
HTT-204ENST00000508321 NDUFAF8A1L188 74 aa3.07□□□□□ -1.92
HTT-204ENST00000508321 KRTAP6-1Q3LI64 71 aa3.07□□□□□ -1.92
HTT-204ENST00000508321 KRTAP20-2Q3LI61 65 aa3.06□□□□□ -1.92
HTT-204ENST00000508321 SYNE1Q8NF91 8797 aaKnown RBP3.02□□□□□ -1.93
HTT-204ENST00000508321 KRTAP9-4Q9BYQ2 154 aa2.99□□□□□ -1.93
HTT-204ENST00000508321 KRTAP5-2Q701N4 177 aa2.93□□□□□ -1.94
HTT-204ENST00000508321 KRTAP6-2Q3LI66 62 aa2.88□□□□□ -1.95
HTT-204ENST00000508321 MT3P25713 68 aa2.87□□□□□ -1.95
HTT-204ENST00000508321 AHNAKQ09666 5890 aaKnown RBP2.84□□□□□ -1.96
HTT-204ENST00000508321 KRTAP4-11Q9BYQ6 195 aa2.83□□□□□ -1.96
HTT-204ENST00000508321 MUC5ACP98088 5654 aa2.79□□□□□ -1.96
HTT-204ENST00000508321 MUC5BQ9HC84 5762 aaPredicted RBP2.77□□□□□ -1.97
HTT-204ENST00000508321 KRTAP5-8O75690 187 aa2.76□□□□□ -1.97
HTT-204ENST00000508321 INE1O15225 51 aa2.65□□□□□ -1.99
HTT-204ENST00000508321 KRTAP9-9Q9BYP9 154 aa2.63□□□□□ -1.99
HTT-204ENST00000508321 OBSCNQ5VST9 7968 aa2.61□□□□□ -1.99
HTT-204ENST00000508321 LCE1EQ5T753 118 aa2.59□□□□□ -1.99
HTT-204ENST00000508321 KRTAP5-1Q6L8H4 278 aa2.55□□□□□ -2
HTT-204ENST00000508321 LCE3DQ9BYE3 92 aa2.55□□□□□ -2
HTT-204ENST00000508321 LCE3EQ5T5B0 92 aa2.45□□□□□ -2.02
HTT-204ENST00000508321 LCE1CQ5T751 118 aa2.39□□□□□ -2.03
HTT-204ENST00000508321 LCE1BQ5T7P3 118 aa2.39□□□□□ -2.03
HTT-204ENST00000508321 KRTAP4-2Q9BYR5 136 aa2.38□□□□□ -2.03
HTT-204ENST00000508321 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.24□□□□□ -2.05
HTT-204ENST00000508321 LCE1FQ5T754 118 aa2.17□□□□□ -2.06
HTT-204ENST00000508321 KRTAP5-11Q6L8G4 156 aa2.16□□□□□ -2.06
HTT-204ENST00000508321 KRTAP4-12Q9BQ66 201 aa2.07□□□□□ -2.08
HTT-204ENST00000508321 KRTAP21-2Q3LI59 83 aa2.02□□□□□ -2.09
HTT-204ENST00000508321 PRM1P04553 51 aa1.98□□□□□ -2.09
HTT-204ENST00000508321 PHGR1C9JFL3 82 aa1.91□□□□□ -2.1
HTT-204ENST00000508321 KRTAP4-4Q9BYR3 166 aa1.75□□□□□ -2.13
HTT-204ENST00000508321 MUC19Q7Z5P9 8384 aa1.67□□□□□ -2.14
HTT-204ENST00000508321 KRTAP21-1Q3LI58 79 aa1.46□□□□□ -2.18
HTT-204ENST00000508321 MUC16Q8WXI7 14507 aa1.15□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 80.5 ms