RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 A6NED7 52 aa5.59□□□□□ -1.51
RAB28-205ENST00000508274 KRTAP2-2Q9BYT5 123 aa5.59□□□□□ -1.51
RAB28-205ENST00000508274 KRTAP2-1Q9BYU5 128 aa5.59□□□□□ -1.51
RAB28-205ENST00000508274 CDC42SE1Q9NRR8 79 aa5.57□□□□□ -1.52
RAB28-205ENST00000508274 A8MU10 97 aa5.55□□□□□ -1.52
RAB28-205ENST00000508274 SEC61GP60059 68 aa5.48□□□□□ -1.53
RAB28-205ENST00000508274 CAMK2N1Q7Z7J9 78 aa5.48□□□□□ -1.53
RAB28-205ENST00000508274 UQCR11O14957 56 aa5.47□□□□□ -1.53
RAB28-205ENST00000508274 SPATA8Q6RVD6 105 aa5.46□□□□□ -1.53
RAB28-205ENST00000508274 MIR22HGQ0VDD5 57 aa5.42□□□□□ -1.54
RAB28-205ENST00000508274 A0A0D9SG42 100 aa5.41□□□□□ -1.54
RAB28-205ENST00000508274 PMAIP1Q13794 54 aa5.39□□□□□ -1.55
RAB28-205ENST00000508274 KRTAP19-7Q3SYF9 63 aa5.38□□□□□ -1.55
RAB28-205ENST00000508274 DSTQ03001 7570 aaKnown RBP5.38□□□□□ -1.55
RAB28-205ENST00000508274 A0A1B0GU33 70 aa5.36□□□□□ -1.55
RAB28-205ENST00000508274 MT1EP04732 61 aa5.33□□□□□ -1.56
RAB28-205ENST00000508274 SPINT4Q6UDR6 99 aa5.33□□□□□ -1.56
RAB28-205ENST00000508274 KRTAP12-1P59990 96 aa5.29□□□□□ -1.56
RAB28-205ENST00000508274 KRTAP19-3Q7Z4W3 81 aa5.29□□□□□ -1.56
RAB28-205ENST00000508274 KTN1-AS1Q86SY8 53 aa5.27□□□□□ -1.57
RAB28-205ENST00000508274 KRTAP19-5Q3LI72 72 aa5.22□□□□□ -1.57
RAB28-205ENST00000508274 MT1GP13640 62 aa5.14□□□□□ -1.59
RAB28-205ENST00000508274 K7ERS5 55 aa5.12□□□□□ -1.59
RAB28-205ENST00000508274 MT1MQ8N339 61 aa5.08□□□□□ -1.6
RAB28-205ENST00000508274 MT1LQ93083 61 aa5.08□□□□□ -1.6
RAB28-205ENST00000508274 LCE3AQ5TA76 89 aa5.08□□□□□ -1.6
RAB28-205ENST00000508274 PP632Q6XCG6 107 aa5.08□□□□□ -1.6
RAB28-205ENST00000508274 C10orf95Q9H7T3 257 aa5.08□□□□□ -1.6
RAB28-205ENST00000508274 GPR98Q8WXG9 6306 aa5.04□□□□□ -1.6
RAB28-205ENST00000508274 PRAC1Q96KF2 57 aa5.04□□□□□ -1.6
RAB28-205ENST00000508274 TNP1P09430 55 aa5.03□□□□□ -1.6
RAB28-205ENST00000508274 KRTAP4-3Q9BYR4 195 aa5□□□□□ -1.61
RAB28-205ENST00000508274 ROMO1P60602 79 aa4.97□□□□□ -1.61
RAB28-205ENST00000508274 MT4P47944 62 aa4.96□□□□□ -1.62
RAB28-205ENST00000508274 HMCN1Q96RW7 5635 aa4.93□□□□□ -1.62
RAB28-205ENST00000508274 KRTAP25-1Q3LHN0 102 aa4.89□□□□□ -1.63
RAB28-205ENST00000508274 KRTAP5-4Q6L8H1 288 aa4.87□□□□□ -1.63
RAB28-205ENST00000508274 KRTAP12-3P60328 96 aa4.86□□□□□ -1.63
RAB28-205ENST00000508274 AHNAK2Q8IVF2 5795 aa4.77□□□□□ -1.65
RAB28-205ENST00000508274 MT3P25713 68 aa4.7□□□□□ -1.66
RAB28-205ENST00000508274 KRTAP5-10Q6L8G5 202 aa4.69□□□□□ -1.66
RAB28-205ENST00000508274 KRTAP5-5Q701N2 237 aaPredicted RBP4.66□□□□□ -1.66
RAB28-205ENST00000508274 A0A0A0MQY5 61 aa4.65□□□□□ -1.67
RAB28-205ENST00000508274 KRTAP20-2Q3LI61 65 aa4.61□□□□□ -1.67
RAB28-205ENST00000508274 SYNE1Q8NF91 8797 aaKnown RBP4.54□□□□□ -1.68
RAB28-205ENST00000508274 SPRR5A0A1B0GTR4 108 aa4.54□□□□□ -1.68
RAB28-205ENST00000508274 KRTAP12-4P60329 112 aa4.52□□□□□ -1.69
RAB28-205ENST00000508274 LCE1EQ5T753 118 aa4.51□□□□□ -1.69
RAB28-205ENST00000508274 KRTAP5-7Q6L8G8 165 aa4.5□□□□□ -1.69
RAB28-205ENST00000508274 KRTAP5-11Q6L8G4 156 aa4.49□□□□□ -1.69
RAB28-205ENST00000508274 LCE3CQ5T5A8 94 aa4.46□□□□□ -1.7
RAB28-205ENST00000508274 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.44□□□□□ -1.7
RAB28-205ENST00000508274 KRTAP6-1Q3LI64 71 aa4.32□□□□□ -1.72
RAB28-205ENST00000508274 MT1AP04731 61 aa4.31□□□□□ -1.72
RAB28-205ENST00000508274 KRTAP5-2Q701N4 177 aa4.27□□□□□ -1.73
RAB28-205ENST00000508274 KRTAP9-6A8MVA2 160 aa4.26□□□□□ -1.73
RAB28-205ENST00000508274 OBSCNQ5VST9 7968 aa4.16□□□□□ -1.74
RAB28-205ENST00000508274 LCE1FQ5T754 118 aa4.15□□□□□ -1.74
RAB28-205ENST00000508274 KRTAP6-2Q3LI66 62 aa4.13□□□□□ -1.75
RAB28-205ENST00000508274 NDUFAF8A1L188 74 aa4.11□□□□□ -1.75
RAB28-205ENST00000508274 KRTAP5-8O75690 187 aa4.1□□□□□ -1.75
RAB28-205ENST00000508274 LUZP6Q538Z0 58 aa4.05□□□□□ -1.76
RAB28-205ENST00000508274 MUC5BQ9HC84 5762 aaPredicted RBP3.91□□□□□ -1.78
RAB28-205ENST00000508274 MUC5ACP98088 5654 aa3.91□□□□□ -1.78
RAB28-205ENST00000508274 AHNAKQ09666 5890 aaKnown RBP3.87□□□□□ -1.79
RAB28-205ENST00000508274 KRTAP5-1Q6L8H4 278 aa3.85□□□□□ -1.79
RAB28-205ENST00000508274 KRTAP4-4Q9BYR3 166 aa3.65□□□□□ -1.82
RAB28-205ENST00000508274 LCE3EQ5T5B0 92 aa3.52□□□□□ -1.85
RAB28-205ENST00000508274 LCE1BQ5T7P3 118 aa3.45□□□□□ -1.86
RAB28-205ENST00000508274 INE1O15225 51 aa3.42□□□□□ -1.86
RAB28-205ENST00000508274 LCE1CQ5T751 118 aa3.37□□□□□ -1.87
RAB28-205ENST00000508274 LCE3DQ9BYE3 92 aa3.19□□□□□ -1.9
RAB28-205ENST00000508274 KRTAP21-2Q3LI59 83 aa2.83□□□□□ -1.96
RAB28-205ENST00000508274 PHGR1C9JFL3 82 aa2.73□□□□□ -1.97
RAB28-205ENST00000508274 PRM1P04553 51 aa2.61□□□□□ -1.99
RAB28-205ENST00000508274 MUC19Q7Z5P9 8384 aa2.54□□□□□ -2
RAB28-205ENST00000508274 KRTAP21-1Q3LI58 79 aa2.05□□□□□ -2.08
RAB28-205ENST00000508274 MUC16Q8WXI7 14507 aa1.76□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 105.2 ms