RNA–Protein interactions for RNA: ENST00000508006.1

SNCB-204, Transcript of synuclein beta, humanhuman

TSL 2

Gene SNCB, Length 969 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-204ENST00000508006 ROMO1P60602 79 aa8.31□□□□□ -1.08
SNCB-204ENST00000508006 GPR98Q8WXG9 6306 aa8.3□□□□□ -1.08
SNCB-204ENST00000508006 DSTQ03001 7570 aaKnown RBP8.27□□□□□ -1.09
SNCB-204ENST00000508006 BRK1Q8WUW1 75 aa8.27□□□□□ -1.09
SNCB-204ENST00000508006 KRTAP19-5Q3LI72 72 aa8.26□□□□□ -1.09
SNCB-204ENST00000508006 KRTAP23-1A1A580 65 aa8.24□□□□□ -1.09
SNCB-204ENST00000508006 MT1EP04732 61 aa8.24□□□□□ -1.09
SNCB-204ENST00000508006 KRTAP4-9Q9BYQ8 210 aa8.18□□□□□ -1.1
SNCB-204ENST00000508006 KRTAP19-3Q7Z4W3 81 aa8.09□□□□□ -1.11
SNCB-204ENST00000508006 KRTAP12-3P60328 96 aa8.07□□□□□ -1.12
SNCB-204ENST00000508006 LCE5AQ5TCM9 118 aa8.04□□□□□ -1.12
SNCB-204ENST00000508006 PP632Q6XCG6 107 aa8.04□□□□□ -1.12
SNCB-204ENST00000508006 MT1GP13640 62 aa7.99□□□□□ -1.13
SNCB-204ENST00000508006 MT1LQ93083 61 aa7.98□□□□□ -1.13
SNCB-204ENST00000508006 LCE1DQ5T752 114 aa7.9□□□□□ -1.14
SNCB-204ENST00000508006 PMAIP1Q13794 54 aa7.84□□□□□ -1.15
SNCB-204ENST00000508006 KRTAP19-4Q3LI73 84 aa7.82□□□□□ -1.16
SNCB-204ENST00000508006 MT1MQ8N339 61 aa7.81□□□□□ -1.16
SNCB-204ENST00000508006 MT4P47944 62 aa7.8□□□□□ -1.16
SNCB-204ENST00000508006 LCE4AQ5TA78 99 aa7.77□□□□□ -1.17
SNCB-204ENST00000508006 PRO0628Q9UI54 55 aa7.77□□□□□ -1.17
SNCB-204ENST00000508006 KRTAP15-1Q3LI76 137 aa7.75□□□□□ -1.17
SNCB-204ENST00000508006 HMCN1Q96RW7 5635 aa7.73□□□□□ -1.17
SNCB-204ENST00000508006 AHNAK2Q8IVF2 5795 aa7.61□□□□□ -1.19
SNCB-204ENST00000508006 KRTAP5-10Q6L8G5 202 aa7.55□□□□□ -1.2
SNCB-204ENST00000508006 KRTAP4-7Q9BYR0 210 aa7.53□□□□□ -1.2
SNCB-204ENST00000508006 KRTAP4-3Q9BYR4 195 aa7.52□□□□□ -1.21
SNCB-204ENST00000508006 LCE3CQ5T5A8 94 aa7.5□□□□□ -1.21
SNCB-204ENST00000508006 KRTAP4-6Q9BYQ5 205 aa7.48□□□□□ -1.21
SNCB-204ENST00000508006 KRTAP5-4Q6L8H1 288 aa7.47□□□□□ -1.21
SNCB-204ENST00000508006 KRTAP5-7Q6L8G8 165 aa7.33□□□□□ -1.24
SNCB-204ENST00000508006 PRAC1Q96KF2 57 aa7.32□□□□□ -1.24
SNCB-204ENST00000508006 KRTAP5-3Q6L8H2 238 aa7.29□□□□□ -1.24
SNCB-204ENST00000508006 KTN1-AS1Q86SY8 53 aa7.29□□□□□ -1.24
SNCB-204ENST00000508006 KRTAP5-5Q701N2 237 aaPredicted RBP7.13□□□□□ -1.27
SNCB-204ENST00000508006 SPRR5A0A1B0GTR4 108 aa7.12□□□□□ -1.27
SNCB-204ENST00000508006 KRTAP20-2Q3LI61 65 aa7.12□□□□□ -1.27
SNCB-204ENST00000508006 LOC100996750A0A140TA64 210 aa7.11□□□□□ -1.27
SNCB-204ENST00000508006 KRTAP12-4P60329 112 aa7□□□□□ -1.29
SNCB-204ENST00000508006 KRTAP9-6A8MVA2 160 aa6.99□□□□□ -1.29
SNCB-204ENST00000508006 SVIPQ8NHG7 77 aa6.85□□□□□ -1.31
SNCB-204ENST00000508006 MT1AP04731 61 aa6.81□□□□□ -1.32
SNCB-204ENST00000508006 SYNE1Q8NF91 8797 aaKnown RBP6.81□□□□□ -1.32
SNCB-204ENST00000508006 KRTAP6-1Q3LI64 71 aa6.69□□□□□ -1.34
SNCB-204ENST00000508006 KRTAP4-11Q9BYQ6 195 aa6.64□□□□□ -1.35
SNCB-204ENST00000508006 KRTAP9-4Q9BYQ2 154 aa6.53□□□□□ -1.36
SNCB-204ENST00000508006 KRTAP5-2Q701N4 177 aa6.44□□□□□ -1.38
SNCB-204ENST00000508006 KRTAP5-8O75690 187 aa6.4□□□□□ -1.38
SNCB-204ENST00000508006 AHNAKQ09666 5890 aaKnown RBP6.35□□□□□ -1.39
SNCB-204ENST00000508006 MUC5ACP98088 5654 aa6.34□□□□□ -1.39
SNCB-204ENST00000508006 MUC5BQ9HC84 5762 aaPredicted RBP6.33□□□□□ -1.4
SNCB-204ENST00000508006 KRTAP6-2Q3LI66 62 aa6.29□□□□□ -1.4
SNCB-204ENST00000508006 OBSCNQ5VST9 7968 aa6.29□□□□□ -1.4
SNCB-204ENST00000508006 MT3P25713 68 aa6.23□□□□□ -1.41
SNCB-204ENST00000508006 KRTAP9-9Q9BYP9 154 aa6.23□□□□□ -1.41
SNCB-204ENST00000508006 LUZP6Q538Z0 58 aa6.22□□□□□ -1.41
SNCB-204ENST00000508006 KRTAP5-1Q6L8H4 278 aa5.88□□□□□ -1.47
SNCB-204ENST00000508006 LCE1EQ5T753 118 aa5.62□□□□□ -1.51
SNCB-204ENST00000508006 LCE3DQ9BYE3 92 aa5.53□□□□□ -1.52
SNCB-204ENST00000508006 NDUFAF8A1L188 74 aa5.46□□□□□ -1.54
SNCB-204ENST00000508006 LCE3EQ5T5B0 92 aa5.3□□□□□ -1.56
SNCB-204ENST00000508006 LCE1BQ5T7P3 118 aa5.27□□□□□ -1.57
SNCB-204ENST00000508006 LCE1CQ5T751 118 aa5.21□□□□□ -1.58
SNCB-204ENST00000508006 KRTAP4-2Q9BYR5 136 aa5.19□□□□□ -1.58
SNCB-204ENST00000508006 KRTAP4-12Q9BQ66 201 aa4.97□□□□□ -1.61
SNCB-204ENST00000508006 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.82□□□□□ -1.64
SNCB-204ENST00000508006 A0A0A0MQY5 61 aa4.68□□□□□ -1.66
SNCB-204ENST00000508006 LCE1FQ5T754 118 aa4.65□□□□□ -1.67
SNCB-204ENST00000508006 KRTAP5-11Q6L8G4 156 aa4.65□□□□□ -1.67
SNCB-204ENST00000508006 INE1O15225 51 aa4.59□□□□□ -1.67
SNCB-204ENST00000508006 PHGR1C9JFL3 82 aa4.48□□□□□ -1.69
SNCB-204ENST00000508006 KRTAP21-2Q3LI59 83 aa4.42□□□□□ -1.7
SNCB-204ENST00000508006 PRM1P04553 51 aa4.24□□□□□ -1.73
SNCB-204ENST00000508006 KRTAP4-4Q9BYR3 166 aa3.96□□□□□ -1.78
SNCB-204ENST00000508006 MUC19Q7Z5P9 8384 aa3.89□□□□□ -1.79
SNCB-204ENST00000508006 H3BS24 57 aa3.48□□□□□ -1.85
SNCB-204ENST00000508006 KRTAP21-1Q3LI58 79 aa3.4□□□□□ -1.87
SNCB-204ENST00000508006 MUC16Q8WXI7 14507 aa2.69□□□□□ -1.98
Retrieved 78 of 20,778 RNA–protein pairs in 53.7 ms