RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 KRTAP2-3P0C7H8 128 aa7.47□□□□□ -1.21
USP53-203ENST00000507597 SPRR2EP22531 72 aa7.47□□□□□ -1.21
USP53-203ENST00000507597 SPRR2BP35325 72 aa7.47□□□□□ -1.21
USP53-203ENST00000507597 SPRR2AP35326 72 aa7.47□□□□□ -1.21
USP53-203ENST00000507597 KRTAP2-4Q9BYR9 128 aa7.47□□□□□ -1.21
USP53-203ENST00000507597 KRTAP4-9Q9BYQ8 210 aa7.46□□□□□ -1.22
USP53-203ENST00000507597 KRTAP19-7Q3SYF9 63 aa7.45□□□□□ -1.22
USP53-203ENST00000507597 KRTAP19-5Q3LI72 72 aa7.44□□□□□ -1.22
USP53-203ENST00000507597 MT1EP04732 61 aa7.39□□□□□ -1.23
USP53-203ENST00000507597 LCE1AQ5T7P2 110 aa7.39□□□□□ -1.23
USP53-203ENST00000507597 PP632Q6XCG6 107 aa7.39□□□□□ -1.23
USP53-203ENST00000507597 KRTAP4-2Q9BYR5 136 aa7.38□□□□□ -1.23
USP53-203ENST00000507597 KRTAP12-3P60328 96 aa7.33□□□□□ -1.24
USP53-203ENST00000507597 PMAIP1Q13794 54 aa7.32□□□□□ -1.24
USP53-203ENST00000507597 KRTAP19-3Q7Z4W3 81 aa7.27□□□□□ -1.25
USP53-203ENST00000507597 PRO0628Q9UI54 55 aa7.25□□□□□ -1.25
USP53-203ENST00000507597 SPRR2DP22532 72 aa7.22□□□□□ -1.25
USP53-203ENST00000507597 KRTAP2-2Q9BYT5 123 aa7.21□□□□□ -1.26
USP53-203ENST00000507597 KRTAP2-1Q9BYU5 128 aa7.21□□□□□ -1.26
USP53-203ENST00000507597 MT1GP13640 62 aa7.2□□□□□ -1.26
USP53-203ENST00000507597 LCE5AQ5TCM9 118 aa7.17□□□□□ -1.26
USP53-203ENST00000507597 MT1LQ93083 61 aa7.16□□□□□ -1.26
USP53-203ENST00000507597 KRTAP4-11Q9BYQ6 195 aa7.15□□□□□ -1.26
USP53-203ENST00000507597 LCE4AQ5TA78 99 aa7.13□□□□□ -1.27
USP53-203ENST00000507597 KRTAP19-4Q3LI73 84 aa7.12□□□□□ -1.27
USP53-203ENST00000507597 KRTAP15-1Q3LI76 137 aa7.05□□□□□ -1.28
USP53-203ENST00000507597 MT1MQ8N339 61 aa7□□□□□ -1.29
USP53-203ENST00000507597 KTN1-AS1Q86SY8 53 aa6.81□□□□□ -1.32
USP53-203ENST00000507597 LCE3CQ5T5A8 94 aa6.79□□□□□ -1.32
USP53-203ENST00000507597 GPR98Q8WXG9 6306 aa6.77□□□□□ -1.33
USP53-203ENST00000507597 KRTAP5-3Q6L8H2 238 aa6.77□□□□□ -1.33
USP53-203ENST00000507597 PRAC1Q96KF2 57 aa6.77□□□□□ -1.33
USP53-203ENST00000507597 KRTAP4-3Q9BYR4 195 aa6.71□□□□□ -1.34
USP53-203ENST00000507597 DSTQ03001 7570 aaKnown RBP6.69□□□□□ -1.34
USP53-203ENST00000507597 SVIPQ8NHG7 77 aa6.48□□□□□ -1.37
USP53-203ENST00000507597 KRTAP5-4Q6L8H1 288 aa6.35□□□□□ -1.39
USP53-203ENST00000507597 KRTAP5-5Q701N2 237 aaPredicted RBP6.33□□□□□ -1.4
USP53-203ENST00000507597 H3BS24 57 aa6.26□□□□□ -1.41
USP53-203ENST00000507597 KRTAP9-6A8MVA2 160 aa6.24□□□□□ -1.41
USP53-203ENST00000507597 MT4P47944 62 aa6.24□□□□□ -1.41
USP53-203ENST00000507597 HMCN1Q96RW7 5635 aa6.22□□□□□ -1.41
USP53-203ENST00000507597 KRTAP12-4P60329 112 aa6.2□□□□□ -1.42
USP53-203ENST00000507597 AHNAK2Q8IVF2 5795 aa6.15□□□□□ -1.43
USP53-203ENST00000507597 SPRR5A0A1B0GTR4 108 aa6.14□□□□□ -1.43
USP53-203ENST00000507597 MT1AP04731 61 aa6.13□□□□□ -1.43
USP53-203ENST00000507597 KRTAP5-10Q6L8G5 202 aa6.08□□□□□ -1.44
USP53-203ENST00000507597 KRTAP6-1Q3LI64 71 aa6□□□□□ -1.45
USP53-203ENST00000507597 KRTAP20-2Q3LI61 65 aa5.97□□□□□ -1.45
USP53-203ENST00000507597 SYNE1Q8NF91 8797 aaKnown RBP5.94□□□□□ -1.46
USP53-203ENST00000507597 KRTAP5-7Q6L8G8 165 aa5.9□□□□□ -1.46
USP53-203ENST00000507597 LUZP6Q538Z0 58 aa5.87□□□□□ -1.47
USP53-203ENST00000507597 MT3P25713 68 aa5.65□□□□□ -1.5
USP53-203ENST00000507597 KRTAP6-2Q3LI66 62 aa5.65□□□□□ -1.5
USP53-203ENST00000507597 KRTAP5-2Q701N4 177 aa5.64□□□□□ -1.51
USP53-203ENST00000507597 AHNAKQ09666 5890 aaKnown RBP5.16□□□□□ -1.58
USP53-203ENST00000507597 KRTAP5-8O75690 187 aa5.16□□□□□ -1.58
USP53-203ENST00000507597 MUC5ACP98088 5654 aa5.14□□□□□ -1.59
USP53-203ENST00000507597 NDUFAF8A1L188 74 aa5.13□□□□□ -1.59
USP53-203ENST00000507597 MUC5BQ9HC84 5762 aaPredicted RBP5.09□□□□□ -1.59
USP53-203ENST00000507597 OBSCNQ5VST9 7968 aa5.08□□□□□ -1.6
USP53-203ENST00000507597 LCE3DQ9BYE3 92 aa5.05□□□□□ -1.6
USP53-203ENST00000507597 LCE1EQ5T753 118 aa5.04□□□□□ -1.6
USP53-203ENST00000507597 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.01□□□□□ -1.61
USP53-203ENST00000507597 KRTAP5-1Q6L8H4 278 aa4.95□□□□□ -1.62
USP53-203ENST00000507597 LCE3EQ5T5B0 92 aa4.85□□□□□ -1.63
USP53-203ENST00000507597 KRTAP5-11Q6L8G4 156 aa4.83□□□□□ -1.64
USP53-203ENST00000507597 LCE1BQ5T7P3 118 aa4.67□□□□□ -1.66
USP53-203ENST00000507597 LCE1CQ5T751 118 aa4.66□□□□□ -1.66
USP53-203ENST00000507597 A0A0A0MQY5 61 aa4.52□□□□□ -1.69
USP53-203ENST00000507597 INE1O15225 51 aa4.34□□□□□ -1.71
USP53-203ENST00000507597 KRTAP4-4Q9BYR3 166 aa4.19□□□□□ -1.74
USP53-203ENST00000507597 LCE1FQ5T754 118 aa3.98□□□□□ -1.77
USP53-203ENST00000507597 KRTAP21-2Q3LI59 83 aa3.93□□□□□ -1.78
USP53-203ENST00000507597 PRM1P04553 51 aa3.9□□□□□ -1.79
USP53-203ENST00000507597 PHGR1C9JFL3 82 aa3.58□□□□□ -1.84
USP53-203ENST00000507597 MUC19Q7Z5P9 8384 aa3.09□□□□□ -1.91
USP53-203ENST00000507597 KRTAP21-1Q3LI58 79 aa2.72□□□□□ -1.97
USP53-203ENST00000507597 MUC16Q8WXI7 14507 aa2.26□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 109.3 ms