RNA–Protein interactions for RNA: ENST00000506831.1

CCHCR1-220, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-220ENST00000506831 SVIPQ8NHG7 77 aa4.3□□□□□ -1.72
CCHCR1-220ENST00000506831 TNP1P09430 55 aa4.27□□□□□ -1.73
CCHCR1-220ENST00000506831 BRK1Q8WUW1 75 aa4.27□□□□□ -1.73
CCHCR1-220ENST00000506831 KRTAP4-9Q9BYQ8 210 aa4.27□□□□□ -1.73
CCHCR1-220ENST00000506831 KRTAP19-3Q7Z4W3 81 aa4.25□□□□□ -1.73
CCHCR1-220ENST00000506831 KRTAP19-7Q3SYF9 63 aa4.24□□□□□ -1.73
CCHCR1-220ENST00000506831 MT1EP04732 61 aa4.22□□□□□ -1.73
CCHCR1-220ENST00000506831 KRTAP19-4Q3LI73 84 aa4.22□□□□□ -1.73
CCHCR1-220ENST00000506831 ROMO1P60602 79 aa4.19□□□□□ -1.74
CCHCR1-220ENST00000506831 LOC100996750A0A140TA64 210 aa4.18□□□□□ -1.74
CCHCR1-220ENST00000506831 KRTAP25-1Q3LHN0 102 aa4.18□□□□□ -1.74
CCHCR1-220ENST00000506831 KRTAP4-6Q9BYQ5 205 aa4.18□□□□□ -1.74
CCHCR1-220ENST00000506831 LCE1DQ5T752 114 aa4.16□□□□□ -1.74
CCHCR1-220ENST00000506831 LCE3AQ5TA76 89 aa4.15□□□□□ -1.75
CCHCR1-220ENST00000506831 MT1GP13640 62 aa4.14□□□□□ -1.75
CCHCR1-220ENST00000506831 LCE4AQ5TA78 99 aa4.14□□□□□ -1.75
CCHCR1-220ENST00000506831 HMCN1Q96RW7 5635 aa4.14□□□□□ -1.75
CCHCR1-220ENST00000506831 PP632Q6XCG6 107 aa4.11□□□□□ -1.75
CCHCR1-220ENST00000506831 KRTAP23-1A1A580 65 aa4.1□□□□□ -1.75
CCHCR1-220ENST00000506831 KRTAP19-5Q3LI72 72 aa4.08□□□□□ -1.76
CCHCR1-220ENST00000506831 MT4P47944 62 aa4.07□□□□□ -1.76
CCHCR1-220ENST00000506831 AHNAK2Q8IVF2 5795 aa4.05□□□□□ -1.76
CCHCR1-220ENST00000506831 MT1MQ8N339 61 aa4.03□□□□□ -1.76
CCHCR1-220ENST00000506831 KRTAP5-4Q6L8H1 288 aa4.02□□□□□ -1.77
CCHCR1-220ENST00000506831 PMAIP1Q13794 54 aa4.01□□□□□ -1.77
CCHCR1-220ENST00000506831 KRTAP5-10Q6L8G5 202 aa4.01□□□□□ -1.77
CCHCR1-220ENST00000506831 PRO0628Q9UI54 55 aa4.01□□□□□ -1.77
CCHCR1-220ENST00000506831 MT1LQ93083 61 aa3.99□□□□□ -1.77
CCHCR1-220ENST00000506831 KRTAP12-3P60328 96 aa3.98□□□□□ -1.77
CCHCR1-220ENST00000506831 KRTAP4-12Q9BQ66 201 aa3.95□□□□□ -1.78
CCHCR1-220ENST00000506831 KRTAP5-7Q6L8G8 165 aa3.9□□□□□ -1.79
CCHCR1-220ENST00000506831 KRTAP4-3Q9BYR4 195 aa3.9□□□□□ -1.79
CCHCR1-220ENST00000506831 KRTAP5-3Q6L8H2 238 aa3.86□□□□□ -1.79
CCHCR1-220ENST00000506831 KRTAP15-1Q3LI76 137 aa3.83□□□□□ -1.8
CCHCR1-220ENST00000506831 PRAC1Q96KF2 57 aa3.82□□□□□ -1.8
CCHCR1-220ENST00000506831 KRTAP20-2Q3LI61 65 aa3.78□□□□□ -1.8
CCHCR1-220ENST00000506831 SPRR5A0A1B0GTR4 108 aa3.77□□□□□ -1.81
CCHCR1-220ENST00000506831 KTN1-AS1Q86SY8 53 aa3.77□□□□□ -1.81
CCHCR1-220ENST00000506831 KRTAP4-7Q9BYR0 210 aa3.75□□□□□ -1.81
CCHCR1-220ENST00000506831 KRTAP5-5Q701N2 237 aaPredicted RBP3.73□□□□□ -1.81
CCHCR1-220ENST00000506831 KRTAP12-4P60329 112 aa3.71□□□□□ -1.82
CCHCR1-220ENST00000506831 LCE3CQ5T5A8 94 aa3.69□□□□□ -1.82
CCHCR1-220ENST00000506831 SYNE1Q8NF91 8797 aaKnown RBP3.69□□□□□ -1.82
CCHCR1-220ENST00000506831 KRTAP9-9Q9BYP9 154 aa3.68□□□□□ -1.82
CCHCR1-220ENST00000506831 KRTAP9-4Q9BYQ2 154 aa3.68□□□□□ -1.82
CCHCR1-220ENST00000506831 A0A0A0MQY5 61 aa3.55□□□□□ -1.84
CCHCR1-220ENST00000506831 KRTAP4-11Q9BYQ6 195 aa3.52□□□□□ -1.85
CCHCR1-220ENST00000506831 KRTAP9-6A8MVA2 160 aa3.49□□□□□ -1.85
CCHCR1-220ENST00000506831 KRTAP5-2Q701N4 177 aa3.47□□□□□ -1.85
CCHCR1-220ENST00000506831 AHNAKQ09666 5890 aaKnown RBP3.41□□□□□ -1.86
CCHCR1-220ENST00000506831 MUC5ACP98088 5654 aa3.4□□□□□ -1.86
CCHCR1-220ENST00000506831 KRTAP5-8O75690 187 aa3.4□□□□□ -1.87
CCHCR1-220ENST00000506831 MT1AP04731 61 aa3.4□□□□□ -1.87
CCHCR1-220ENST00000506831 MUC5BQ9HC84 5762 aaPredicted RBP3.4□□□□□ -1.87
CCHCR1-220ENST00000506831 OBSCNQ5VST9 7968 aa3.39□□□□□ -1.87
CCHCR1-220ENST00000506831 KRTAP6-1Q3LI64 71 aa3.37□□□□□ -1.87
CCHCR1-220ENST00000506831 KRTAP6-2Q3LI66 62 aa3.27□□□□□ -1.89
CCHCR1-220ENST00000506831 KRTAP4-2Q9BYR5 136 aa3.26□□□□□ -1.89
CCHCR1-220ENST00000506831 KRTAP5-1Q6L8H4 278 aa3.15□□□□□ -1.91
CCHCR1-220ENST00000506831 LUZP6Q538Z0 58 aa3.14□□□□□ -1.91
CCHCR1-220ENST00000506831 MT3P25713 68 aa3.13□□□□□ -1.91
CCHCR1-220ENST00000506831 LCE1EQ5T753 118 aa2.97□□□□□ -1.93
CCHCR1-220ENST00000506831 NDUFAF8A1L188 74 aa2.87□□□□□ -1.95
CCHCR1-220ENST00000506831 LCE1CQ5T751 118 aa2.74□□□□□ -1.97
CCHCR1-220ENST00000506831 LCE1BQ5T7P3 118 aa2.74□□□□□ -1.97
CCHCR1-220ENST00000506831 LCE3DQ9BYE3 92 aa2.73□□□□□ -1.97
CCHCR1-220ENST00000506831 LCE3EQ5T5B0 92 aa2.62□□□□□ -1.99
CCHCR1-220ENST00000506831 LCE1FQ5T754 118 aa2.54□□□□□ -2
CCHCR1-220ENST00000506831 KRTAP5-11Q6L8G4 156 aa2.5□□□□□ -2.01
CCHCR1-220ENST00000506831 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.48□□□□□ -2.01
CCHCR1-220ENST00000506831 INE1O15225 51 aa2.35□□□□□ -2.03
CCHCR1-220ENST00000506831 PHGR1C9JFL3 82 aa2.33□□□□□ -2.04
CCHCR1-220ENST00000506831 KRTAP21-2Q3LI59 83 aa2.24□□□□□ -2.05
CCHCR1-220ENST00000506831 PRM1P04553 51 aa2.17□□□□□ -2.06
CCHCR1-220ENST00000506831 MUC19Q7Z5P9 8384 aa2.09□□□□□ -2.08
CCHCR1-220ENST00000506831 KRTAP4-4Q9BYR3 166 aa2.05□□□□□ -2.08
CCHCR1-220ENST00000506831 KRTAP21-1Q3LI58 79 aa1.8□□□□□ -2.12
CCHCR1-220ENST00000506831 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 139.4 ms