RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 S4R3F8 94 aa0.94□□□□□ -2.26
TRAPPC11-205ENST00000506426 KRTAP2-3P0C7H8 128 aa0.93□□□□□ -2.26
TRAPPC11-205ENST00000506426 KLKP1Q107X0 134 aa0.93□□□□□ -2.26
TRAPPC11-205ENST00000506426 ATXN8Q156A1 80 aa0.93□□□□□ -2.26
TRAPPC11-205ENST00000506426 KRTAP2-4Q9BYR9 128 aa0.93□□□□□ -2.26
TRAPPC11-205ENST00000506426 UQCR10Q9UDW1 63 aa0.93□□□□□ -2.26
TRAPPC11-205ENST00000506426 J3QR89 54 aa0.92□□□□□ -2.26
TRAPPC11-205ENST00000506426 K7EP34 96 aa0.92□□□□□ -2.26
TRAPPC11-205ENST00000506426 SPRR2DP22532 72 aa0.92□□□□□ -2.26
TRAPPC11-205ENST00000506426 MT1XP80297 61 aa0.92□□□□□ -2.26
TRAPPC11-205ENST00000506426 KRTAP8-1Q8IUC2 63 aa0.92□□□□□ -2.26
TRAPPC11-205ENST00000506426 DMAC1Q96GE9 116 aa0.92□□□□□ -2.26
TRAPPC11-205ENST00000506426 AHNAKQ09666 5890 aaKnown RBP0.91□□□□□ -2.26
TRAPPC11-205ENST00000506426 AHNAK2Q8IVF2 5795 aa0.91□□□□□ -2.26
TRAPPC11-205ENST00000506426 A0A1W2PPM0 123 aa0.91□□□□□ -2.26
TRAPPC11-205ENST00000506426 SMIM6P0DI80 62 aa0.91□□□□□ -2.26
TRAPPC11-205ENST00000506426 KRTAP2-1Q9BYU5 128 aa0.9□□□□□ -2.27
TRAPPC11-205ENST00000506426 M0R143 59 aa0.89□□□□□ -2.27
TRAPPC11-205ENST00000506426 SPCS1Q9Y6A9 102 aa0.89□□□□□ -2.27
TRAPPC11-205ENST00000506426 K7ERU9 68 aa0.88□□□□□ -2.27
TRAPPC11-205ENST00000506426 CRIPTQ9P021 101 aa0.88□□□□□ -2.27
TRAPPC11-205ENST00000506426 M0QZ58 72 aa0.87□□□□□ -2.27
TRAPPC11-205ENST00000506426 PLAC4Q8WY50 150 aa0.87□□□□□ -2.27
TRAPPC11-205ENST00000506426 UBL5Q9BZL1 73 aa0.87□□□□□ -2.27
TRAPPC11-205ENST00000506426 CYP4F30PQ9H0H9 118 aa0.87□□□□□ -2.27
TRAPPC11-205ENST00000506426 TRAV22A0A0B4J277 110 aa0.86□□□□□ -2.27
TRAPPC11-205ENST00000506426 LOC101927531A0A1B0GV80 90 aa0.86□□□□□ -2.27
TRAPPC11-205ENST00000506426 NDUFC1O43677 76 aa0.86□□□□□ -2.27
TRAPPC11-205ENST00000506426 H0Y9P7 68 aa0.85□□□□□ -2.27
TRAPPC11-205ENST00000506426 H0YAA0 97 aa0.85□□□□□ -2.27
TRAPPC11-205ENST00000506426 TP53AIP1Q9HCN2 124 aa0.85□□□□□ -2.27
TRAPPC11-205ENST00000506426 CCDC179H3BU77 68 aa0.84□□□□□ -2.27
TRAPPC11-205ENST00000506426 LINC00208Q96KT6 92 aa0.84□□□□□ -2.27
TRAPPC11-205ENST00000506426 ACYP1P07311 99 aa0.83□□□□□ -2.28
TRAPPC11-205ENST00000506426 MT4P47944 62 aa0.83□□□□□ -2.28
TRAPPC11-205ENST00000506426 ETDBQ3ZM63 59 aa0.83□□□□□ -2.28
TRAPPC11-205ENST00000506426 MT-ATP8P03928 68 aa0.82□□□□□ -2.28
TRAPPC11-205ENST00000506426 MT1EP04732 61 aa0.82□□□□□ -2.28
TRAPPC11-205ENST00000506426 KRTAP19-7Q3SYF9 63 aa0.82□□□□□ -2.28
TRAPPC11-205ENST00000506426 ATOX1O00244 68 aa0.81□□□□□ -2.28
TRAPPC11-205ENST00000506426 KRTAP19-3Q7Z4W3 81 aa0.81□□□□□ -2.28
TRAPPC11-205ENST00000506426 C20orf197Q8N268 126 aa0.81□□□□□ -2.28
TRAPPC11-205ENST00000506426 KRTAP19-5Q3LI72 72 aa0.8□□□□□ -2.28
TRAPPC11-205ENST00000506426 COL5A1-AS1Q5SY13 56 aa0.8□□□□□ -2.28
TRAPPC11-205ENST00000506426 MUC5BQ9HC84 5762 aaPredicted RBP0.8□□□□□ -2.28
TRAPPC11-205ENST00000506426 ATP5EP2Q5VTU8 51 aa0.79□□□□□ -2.28
TRAPPC11-205ENST00000506426 KRTAP5-10Q6L8G5 202 aa0.79□□□□□ -2.28
TRAPPC11-205ENST00000506426 A0A0D9SG42 100 aa0.78□□□□□ -2.28
TRAPPC11-205ENST00000506426 GTF2H5Q6ZYL4 71 aa0.78□□□□□ -2.28
TRAPPC11-205ENST00000506426 MT1MQ8N339 61 aa0.78□□□□□ -2.28
TRAPPC11-205ENST00000506426 SYNE1Q8NF91 8797 aaKnown RBP0.78□□□□□ -2.28
TRAPPC11-205ENST00000506426 ATP5EP56381 51 aaPredicted RBP0.77□□□□□ -2.29
TRAPPC11-205ENST00000506426 MT1LQ93083 61 aa0.77□□□□□ -2.29
TRAPPC11-205ENST00000506426 CHKB-CPT1BH3BT56 60 aa0.76□□□□□ -2.29
TRAPPC11-205ENST00000506426 LINC00643Q86TS7 51 aa0.76□□□□□ -2.29
TRAPPC11-205ENST00000506426 A0A1B0GV90 55 aa0.75□□□□□ -2.29
TRAPPC11-205ENST00000506426 MT1GP13640 62 aa0.75□□□□□ -2.29
TRAPPC11-205ENST00000506426 SPATA8Q6RVD6 105 aa0.75□□□□□ -2.29
TRAPPC11-205ENST00000506426 C10orf95Q9H7T3 257 aa0.75□□□□□ -2.29
TRAPPC11-205ENST00000506426 ACYP2P14621 99 aa0.74□□□□□ -2.29
TRAPPC11-205ENST00000506426 KRTAP20-2Q3LI61 65 aa0.74□□□□□ -2.29
TRAPPC11-205ENST00000506426 SPTSSBQ8NFR3 76 aa0.73□□□□□ -2.29
TRAPPC11-205ENST00000506426 MUC5ACP98088 5654 aa0.73□□□□□ -2.29
TRAPPC11-205ENST00000506426 SERP1Q9Y6X1 66 aa0.7□□□□□ -2.3
TRAPPC11-205ENST00000506426 TNP1P09430 55 aa0.69□□□□□ -2.3
TRAPPC11-205ENST00000506426 SERP2Q8N6R1 65 aa0.69□□□□□ -2.3
TRAPPC11-205ENST00000506426 A0A1B0GU69 56 aa0.66□□□□□ -2.3
TRAPPC11-205ENST00000506426 H7BZZ5 65 aa0.66□□□□□ -2.3
TRAPPC11-205ENST00000506426 KRTAP6-1Q3LI64 71 aa0.66□□□□□ -2.3
TRAPPC11-205ENST00000506426 PRR15LQ9BU68 103 aa0.66□□□□□ -2.3
TRAPPC11-205ENST00000506426 MT1AP04731 61 aa0.64□□□□□ -2.31
TRAPPC11-205ENST00000506426 KRTAP6-2Q3LI66 62 aa0.64□□□□□ -2.31
TRAPPC11-205ENST00000506426 LINC01558Q9Y6Z2 57 aa0.61□□□□□ -2.31
TRAPPC11-205ENST00000506426 UQCR11O14957 56 aa0.58□□□□□ -2.32
TRAPPC11-205ENST00000506426 MUC16Q8WXI7 14507 aa0.54□□□□□ -2.32
TRAPPC11-205ENST00000506426 PHGR1C9JFL3 82 aa0.48□□□□□ -2.33
TRAPPC11-205ENST00000506426 KRTAP21-1Q3LI58 79 aa0.44□□□□□ -2.34
TRAPPC11-205ENST00000506426 PRM1P04553 51 aa0.29□□□□□ -2.36
Retrieved 78 of 20,778 RNA–protein pairs in 66.8 ms