RNA–Protein interactions for RNA: ENST00000506239.6

SMN1-205, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 5

Gene SMN1, Length 1,550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-205ENST00000506239 KRTAP19-5Q3LI72 72 aa6.92□□□□□ -1.3
SMN1-205ENST00000506239 CRCT1Q9UGL9 99 aa6.91□□□□□ -1.3
SMN1-205ENST00000506239 KRTAP15-1Q3LI76 137 aa6.87□□□□□ -1.31
SMN1-205ENST00000506239 LCE4AQ5TA78 99 aa6.84□□□□□ -1.31
SMN1-205ENST00000506239 KRTAP19-7Q3SYF9 63 aa6.83□□□□□ -1.32
SMN1-205ENST00000506239 LCE5AQ5TCM9 118 aa6.8□□□□□ -1.32
SMN1-205ENST00000506239 MT1EP04732 61 aa6.71□□□□□ -1.34
SMN1-205ENST00000506239 MACF1Q9UPN3 7388 aaKnown RBP6.66□□□□□ -1.34
SMN1-205ENST00000506239 SPRR5A0A1B0GTR4 108 aa6.65□□□□□ -1.34
SMN1-205ENST00000506239 KRTAP19-4Q3LI73 84 aa6.59□□□□□ -1.35
SMN1-205ENST00000506239 MT1LQ93083 61 aa6.59□□□□□ -1.35
SMN1-205ENST00000506239 LCE3CQ5T5A8 94 aa6.54□□□□□ -1.36
SMN1-205ENST00000506239 SPRR2FQ96RM1 72 aa6.5□□□□□ -1.37
SMN1-205ENST00000506239 KRTAP9-7A8MTY7 169 aa6.45□□□□□ -1.38
SMN1-205ENST00000506239 KRTAP5-9P26371 169 aa6.45□□□□□ -1.38
SMN1-205ENST00000506239 MUC12Q9UKN1 5478 aa6.45□□□□□ -1.38
SMN1-205ENST00000506239 KRTAP19-3Q7Z4W3 81 aa6.44□□□□□ -1.38
SMN1-205ENST00000506239 SYNE2Q8WXH0 6885 aaKnown RBP6.42□□□□□ -1.38
SMN1-205ENST00000506239 LUZP6Q538Z0 58 aa6.4□□□□□ -1.38
SMN1-205ENST00000506239 MT1GP13640 62 aa6.39□□□□□ -1.39
SMN1-205ENST00000506239 MT1MQ8N339 61 aa6.31□□□□□ -1.4
SMN1-205ENST00000506239 NDUFAF8A1L188 74 aa6.3□□□□□ -1.4
SMN1-205ENST00000506239 KRTAP6-3Q3LI67 103 aa6.29□□□□□ -1.4
SMN1-205ENST00000506239 LCE1AQ5T7P2 110 aa6.23□□□□□ -1.41
SMN1-205ENST00000506239 MDN1Q9NU22 5596 aa6.21□□□□□ -1.42
SMN1-205ENST00000506239 KRTAP9-6A8MVA2 160 aa6.18□□□□□ -1.42
SMN1-205ENST00000506239 KRTAP4-3Q9BYR4 195 aa6.16□□□□□ -1.42
SMN1-205ENST00000506239 SPRR2EP22531 72 aa6.15□□□□□ -1.42
SMN1-205ENST00000506239 SPRR2BP35325 72 aa6.15□□□□□ -1.42
SMN1-205ENST00000506239 SPRR2AP35326 72 aa6.15□□□□□ -1.42
SMN1-205ENST00000506239 SPRR2DP22532 72 aa5.93□□□□□ -1.46
SMN1-205ENST00000506239 DSTQ03001 7570 aaKnown RBP5.91□□□□□ -1.46
SMN1-205ENST00000506239 NEBP20929 6669 aa5.85□□□□□ -1.47
SMN1-205ENST00000506239 KRTAP2-3P0C7H8 128 aa5.76□□□□□ -1.49
SMN1-205ENST00000506239 KRTAP2-4Q9BYR9 128 aa5.76□□□□□ -1.49
SMN1-205ENST00000506239 KRTAP2-1Q9BYU5 128 aa5.76□□□□□ -1.49
SMN1-205ENST00000506239 KRTAP5-5Q701N2 237 aaPredicted RBP5.71□□□□□ -1.5
SMN1-205ENST00000506239 H3BS24 57 aa5.63□□□□□ -1.51
SMN1-205ENST00000506239 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.63□□□□□ -1.51
SMN1-205ENST00000506239 MT1AP04731 61 aa5.6□□□□□ -1.51
SMN1-205ENST00000506239 A0A0A0MQY5 61 aa5.55□□□□□ -1.52
SMN1-205ENST00000506239 KRTAP6-1Q3LI64 71 aa5.54□□□□□ -1.52
SMN1-205ENST00000506239 KRTAP5-4Q6L8H1 288 aa5.42□□□□□ -1.54
SMN1-205ENST00000506239 SYNE1Q8NF91 8797 aaKnown RBP5.37□□□□□ -1.55
SMN1-205ENST00000506239 KRTAP2-2Q9BYT5 123 aa5.37□□□□□ -1.55
SMN1-205ENST00000506239 KRTAP20-1Q3LI63 56 aa5.33□□□□□ -1.56
SMN1-205ENST00000506239 KRTAP12-4P60329 112 aa5.25□□□□□ -1.57
SMN1-205ENST00000506239 INE1O15225 51 aa5.23□□□□□ -1.57
SMN1-205ENST00000506239 MT4P47944 62 aa5.12□□□□□ -1.59
SMN1-205ENST00000506239 KRTAP6-2Q3LI66 62 aa5.08□□□□□ -1.6
SMN1-205ENST00000506239 KRTAP5-11Q6L8G4 156 aa5.07□□□□□ -1.6
SMN1-205ENST00000506239 MT3P25713 68 aa5.06□□□□□ -1.6
SMN1-205ENST00000506239 KRTAP20-2Q3LI61 65 aa5.04□□□□□ -1.6
SMN1-205ENST00000506239 HMCN1Q96RW7 5635 aa5.03□□□□□ -1.6
SMN1-205ENST00000506239 KRTAP5-2Q701N4 177 aa4.93□□□□□ -1.62
SMN1-205ENST00000506239 LCE3DQ9BYE3 92 aa4.91□□□□□ -1.62
SMN1-205ENST00000506239 LCE3EQ5T5B0 92 aa4.78□□□□□ -1.64
SMN1-205ENST00000506239 KRTAP5-1Q6L8H4 278 aa4.77□□□□□ -1.65
SMN1-205ENST00000506239 KRTAP4-4Q9BYR3 166 aa4.68□□□□□ -1.66
SMN1-205ENST00000506239 OBSCNQ5VST9 7968 aa4.61□□□□□ -1.67
SMN1-205ENST00000506239 AHNAK2Q8IVF2 5795 aa4.42□□□□□ -1.7
SMN1-205ENST00000506239 LCE1EQ5T753 118 aa4.4□□□□□ -1.7
SMN1-205ENST00000506239 KRTAP5-8O75690 187 aa4.19□□□□□ -1.74
SMN1-205ENST00000506239 PRM1P04553 51 aa4.19□□□□□ -1.74
SMN1-205ENST00000506239 KRTAP5-10Q6L8G5 202 aa4.17□□□□□ -1.74
SMN1-205ENST00000506239 LCE1CQ5T751 118 aa4.1□□□□□ -1.75
SMN1-205ENST00000506239 LCE1BQ5T7P3 118 aa4.1□□□□□ -1.75
SMN1-205ENST00000506239 KRTAP5-7Q6L8G8 165 aa4.1□□□□□ -1.75
SMN1-205ENST00000506239 MUC5ACP98088 5654 aa4.1□□□□□ -1.75
SMN1-205ENST00000506239 GPR98Q8WXG9 6306 aa4.05□□□□□ -1.76
SMN1-205ENST00000506239 KRTAP21-2Q3LI59 83 aa3.63□□□□□ -1.83
SMN1-205ENST00000506239 MUC5BQ9HC84 5762 aaPredicted RBP3.61□□□□□ -1.83
SMN1-205ENST00000506239 AHNAKQ09666 5890 aaKnown RBP3.3□□□□□ -1.88
SMN1-205ENST00000506239 LCE1FQ5T754 118 aa3.25□□□□□ -1.89
SMN1-205ENST00000506239 PHGR1C9JFL3 82 aa3.1□□□□□ -1.91
SMN1-205ENST00000506239 MUC19Q7Z5P9 8384 aa2.69□□□□□ -1.98
SMN1-205ENST00000506239 KRTAP21-1Q3LI58 79 aa2.61□□□□□ -1.99
SMN1-205ENST00000506239 MUC16Q8WXI7 14507 aa2.03□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 65.1 ms