RNA–Protein interactions for RNA: ENST00000506134.5

TRIM6-208, Transcript of tripartite motif containing 6, humanhuman

TSL 2 BASIC

Gene TRIM6, Length 1,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-208ENST00000506134 CDC42SE1Q9NRR8 79 aa3.83□□□□□ -1.8
TRIM6-208ENST00000506134 KMT2DO14686 5537 aa3.82□□□□□ -1.8
TRIM6-208ENST00000506134 KRTAP5-9P26371 169 aa3.8□□□□□ -1.8
TRIM6-208ENST00000506134 TNP1P09430 55 aa3.78□□□□□ -1.8
TRIM6-208ENST00000506134 NDUFAF8A1L188 74 aa3.76□□□□□ -1.81
TRIM6-208ENST00000506134 KRTAP20-1Q3LI63 56 aa3.76□□□□□ -1.81
TRIM6-208ENST00000506134 SPRR2FQ96RM1 72 aa3.76□□□□□ -1.81
TRIM6-208ENST00000506134 MUC12Q9UKN1 5478 aa3.75□□□□□ -1.81
TRIM6-208ENST00000506134 KRTAP2-2Q9BYT5 123 aa3.74□□□□□ -1.81
TRIM6-208ENST00000506134 LCE3AQ5TA76 89 aa3.7□□□□□ -1.82
TRIM6-208ENST00000506134 BRK1Q8WUW1 75 aa3.7□□□□□ -1.82
TRIM6-208ENST00000506134 KRTAP25-1Q3LHN0 102 aa3.69□□□□□ -1.82
TRIM6-208ENST00000506134 KRTAP19-7Q3SYF9 63 aa3.68□□□□□ -1.82
TRIM6-208ENST00000506134 ROMO1P60602 79 aa3.67□□□□□ -1.82
TRIM6-208ENST00000506134 KRTAP19-5Q3LI72 72 aa3.66□□□□□ -1.82
TRIM6-208ENST00000506134 SPRR2EP22531 72 aa3.64□□□□□ -1.83
TRIM6-208ENST00000506134 SPRR2BP35325 72 aa3.64□□□□□ -1.83
TRIM6-208ENST00000506134 SPRR2AP35326 72 aa3.64□□□□□ -1.83
TRIM6-208ENST00000506134 MT1EP04732 61 aa3.62□□□□□ -1.83
TRIM6-208ENST00000506134 KRTAP2-3P0C7H8 128 aa3.62□□□□□ -1.83
TRIM6-208ENST00000506134 KRTAP2-4Q9BYR9 128 aa3.62□□□□□ -1.83
TRIM6-208ENST00000506134 MDN1Q9NU22 5596 aa3.61□□□□□ -1.83
TRIM6-208ENST00000506134 PRO0628Q9UI54 55 aa3.59□□□□□ -1.83
TRIM6-208ENST00000506134 KRTAP5-11Q6L8G4 156 aa3.58□□□□□ -1.84
TRIM6-208ENST00000506134 KRTAP12-3P60328 96 aa3.55□□□□□ -1.84
TRIM6-208ENST00000506134 KRTAP19-3Q7Z4W3 81 aa3.53□□□□□ -1.84
TRIM6-208ENST00000506134 SPRR2DP22532 72 aa3.51□□□□□ -1.85
TRIM6-208ENST00000506134 MT1LQ93083 61 aa3.51□□□□□ -1.85
TRIM6-208ENST00000506134 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.51□□□□□ -1.85
TRIM6-208ENST00000506134 PMAIP1Q13794 54 aa3.5□□□□□ -1.85
TRIM6-208ENST00000506134 KRTAP2-1Q9BYU5 128 aa3.5□□□□□ -1.85
TRIM6-208ENST00000506134 MT1GP13640 62 aa3.49□□□□□ -1.85
TRIM6-208ENST00000506134 PP632Q6XCG6 107 aa3.48□□□□□ -1.85
TRIM6-208ENST00000506134 MT3P25713 68 aa3.43□□□□□ -1.86
TRIM6-208ENST00000506134 MT1MQ8N339 61 aa3.43□□□□□ -1.86
TRIM6-208ENST00000506134 LCE1EQ5T753 118 aa3.41□□□□□ -1.86
TRIM6-208ENST00000506134 KRTAP4-3Q9BYR4 195 aa3.38□□□□□ -1.87
TRIM6-208ENST00000506134 GPR98Q8WXG9 6306 aa3.34□□□□□ -1.88
TRIM6-208ENST00000506134 LCE3CQ5T5A8 94 aa3.31□□□□□ -1.88
TRIM6-208ENST00000506134 LUZP6Q538Z0 58 aa3.29□□□□□ -1.88
TRIM6-208ENST00000506134 DSTQ03001 7570 aaKnown RBP3.29□□□□□ -1.88
TRIM6-208ENST00000506134 KTN1-AS1Q86SY8 53 aa3.23□□□□□ -1.89
TRIM6-208ENST00000506134 LCE1FQ5T754 118 aa3.2□□□□□ -1.9
TRIM6-208ENST00000506134 KRTAP9-6A8MVA2 160 aa3.13□□□□□ -1.91
TRIM6-208ENST00000506134 KRTAP5-4Q6L8H1 288 aa3.12□□□□□ -1.91
TRIM6-208ENST00000506134 KRTAP5-5Q701N2 237 aaPredicted RBP3.12□□□□□ -1.91
TRIM6-208ENST00000506134 MT4P47944 62 aa3.07□□□□□ -1.92
TRIM6-208ENST00000506134 KRTAP5-1Q6L8H4 278 aa3.07□□□□□ -1.92
TRIM6-208ENST00000506134 HMCN1Q96RW7 5635 aa3□□□□□ -1.93
TRIM6-208ENST00000506134 SPRR5A0A1B0GTR4 108 aa2.99□□□□□ -1.93
TRIM6-208ENST00000506134 MT1AP04731 61 aa2.99□□□□□ -1.93
TRIM6-208ENST00000506134 KRTAP12-4P60329 112 aa2.97□□□□□ -1.93
TRIM6-208ENST00000506134 KRTAP6-1Q3LI64 71 aa2.97□□□□□ -1.93
TRIM6-208ENST00000506134 KRTAP4-4Q9BYR3 166 aa2.95□□□□□ -1.94
TRIM6-208ENST00000506134 KRTAP5-10Q6L8G5 202 aa2.94□□□□□ -1.94
TRIM6-208ENST00000506134 AHNAK2Q8IVF2 5795 aa2.94□□□□□ -1.94
TRIM6-208ENST00000506134 KRTAP20-2Q3LI61 65 aa2.92□□□□□ -1.94
TRIM6-208ENST00000506134 SYNE1Q8NF91 8797 aaKnown RBP2.92□□□□□ -1.94
TRIM6-208ENST00000506134 KRTAP5-7Q6L8G8 165 aa2.87□□□□□ -1.95
TRIM6-208ENST00000506134 KRTAP6-2Q3LI66 62 aa2.78□□□□□ -1.96
TRIM6-208ENST00000506134 LCE3EQ5T5B0 92 aa2.77□□□□□ -1.97
TRIM6-208ENST00000506134 KRTAP5-2Q701N4 177 aa2.77□□□□□ -1.97
TRIM6-208ENST00000506134 OBSCNQ5VST9 7968 aa2.75□□□□□ -1.97
TRIM6-208ENST00000506134 AHNAKQ09666 5890 aaKnown RBP2.53□□□□□ -2
TRIM6-208ENST00000506134 KRTAP5-8O75690 187 aa2.51□□□□□ -2.01
TRIM6-208ENST00000506134 MUC5ACP98088 5654 aa2.5□□□□□ -2.01
TRIM6-208ENST00000506134 MUC5BQ9HC84 5762 aaPredicted RBP2.47□□□□□ -2.01
TRIM6-208ENST00000506134 LCE3DQ9BYE3 92 aa2.43□□□□□ -2.02
TRIM6-208ENST00000506134 INE1O15225 51 aa2.31□□□□□ -2.04
TRIM6-208ENST00000506134 LCE1BQ5T7P3 118 aa2.29□□□□□ -2.04
TRIM6-208ENST00000506134 LCE1CQ5T751 118 aa2.25□□□□□ -2.05
TRIM6-208ENST00000506134 KRTAP21-2Q3LI59 83 aa1.95□□□□□ -2.1
TRIM6-208ENST00000506134 PRM1P04553 51 aa1.9□□□□□ -2.11
TRIM6-208ENST00000506134 MUC19Q7Z5P9 8384 aa1.88□□□□□ -2.11
TRIM6-208ENST00000506134 PHGR1C9JFL3 82 aa1.73□□□□□ -2.13
TRIM6-208ENST00000506134 KRTAP21-1Q3LI58 79 aa1.34□□□□□ -2.19
TRIM6-208ENST00000506134 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 42.2 ms