RNA–Protein interactions for RNA: ENST00000505964.1

SGCA-205, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 494 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-205ENST00000505964 SPRR2DP22532 72 aa4.47□□□□□ -1.69
SGCA-205ENST00000505964 KRTAP8-1Q8IUC2 63 aa4.43□□□□□ -1.7
SGCA-205ENST00000505964 GPR98Q8WXG9 6306 aa4.43□□□□□ -1.7
SGCA-205ENST00000505964 KRTAP23-1A1A580 65 aa4.42□□□□□ -1.7
SGCA-205ENST00000505964 LCE3BQ5TA77 95 aa4.38□□□□□ -1.71
SGCA-205ENST00000505964 PP632Q6XCG6 107 aa4.36□□□□□ -1.71
SGCA-205ENST00000505964 KRTAP4-8A0A0G2JLE6 195 aa4.34□□□□□ -1.71
SGCA-205ENST00000505964 LCE3AQ5TA76 89 aa4.34□□□□□ -1.71
SGCA-205ENST00000505964 KRTAP4-8Q9BYQ9 185 aa4.34□□□□□ -1.71
SGCA-205ENST00000505964 DSTQ03001 7570 aaKnown RBP4.31□□□□□ -1.72
SGCA-205ENST00000505964 KRTAP4-9Q9BYQ8 210 aa4.22□□□□□ -1.73
SGCA-205ENST00000505964 KRTAP19-5Q3LI72 72 aa4.21□□□□□ -1.74
SGCA-205ENST00000505964 KRTAP19-7Q3SYF9 63 aa4.21□□□□□ -1.74
SGCA-205ENST00000505964 KRTAP12-3P60328 96 aa4.2□□□□□ -1.74
SGCA-205ENST00000505964 MT1EP04732 61 aa4.14□□□□□ -1.75
SGCA-205ENST00000505964 KRTAP15-1Q3LI76 137 aa4.08□□□□□ -1.76
SGCA-205ENST00000505964 KRTAP19-4Q3LI73 84 aa4.05□□□□□ -1.76
SGCA-205ENST00000505964 AHNAK2Q8IVF2 5795 aa4.04□□□□□ -1.76
SGCA-205ENST00000505964 LCE1DQ5T752 114 aa4.04□□□□□ -1.76
SGCA-205ENST00000505964 HMCN1Q96RW7 5635 aa4.03□□□□□ -1.76
SGCA-205ENST00000505964 MT1LQ93083 61 aa4.03□□□□□ -1.76
SGCA-205ENST00000505964 KRTAP19-3Q7Z4W3 81 aa4.02□□□□□ -1.77
SGCA-205ENST00000505964 MT1GP13640 62 aa3.99□□□□□ -1.77
SGCA-205ENST00000505964 MT4P47944 62 aa3.98□□□□□ -1.77
SGCA-205ENST00000505964 LCE5AQ5TCM9 118 aa3.97□□□□□ -1.77
SGCA-205ENST00000505964 KRTAP5-10Q6L8G5 202 aa3.93□□□□□ -1.78
SGCA-205ENST00000505964 LCE3CQ5T5A8 94 aa3.91□□□□□ -1.78
SGCA-205ENST00000505964 MT1MQ8N339 61 aa3.91□□□□□ -1.78
SGCA-205ENST00000505964 LCE4AQ5TA78 99 aa3.87□□□□□ -1.79
SGCA-205ENST00000505964 KRTAP4-7Q9BYR0 210 aa3.83□□□□□ -1.8
SGCA-205ENST00000505964 KRTAP5-7Q6L8G8 165 aa3.81□□□□□ -1.8
SGCA-205ENST00000505964 KRTAP4-6Q9BYQ5 205 aa3.8□□□□□ -1.8
SGCA-205ENST00000505964 SPRR5A0A1B0GTR4 108 aa3.79□□□□□ -1.8
SGCA-205ENST00000505964 KRTAP4-3Q9BYR4 195 aa3.77□□□□□ -1.81
SGCA-205ENST00000505964 NDUFAF8A1L188 74 aa3.76□□□□□ -1.81
SGCA-205ENST00000505964 KRTAP5-3Q6L8H2 238 aa3.75□□□□□ -1.81
SGCA-205ENST00000505964 LUZP6Q538Z0 58 aa3.74□□□□□ -1.81
SGCA-205ENST00000505964 KRTAP5-4Q6L8H1 288 aa3.74□□□□□ -1.81
SGCA-205ENST00000505964 KRTAP9-6A8MVA2 160 aa3.66□□□□□ -1.82
SGCA-205ENST00000505964 LOC100996750A0A140TA64 210 aa3.61□□□□□ -1.83
SGCA-205ENST00000505964 KRTAP20-2Q3LI61 65 aa3.58□□□□□ -1.84
SGCA-205ENST00000505964 H3BS24 57 aa3.56□□□□□ -1.84
SGCA-205ENST00000505964 KRTAP5-5Q701N2 237 aaPredicted RBP3.55□□□□□ -1.84
SGCA-205ENST00000505964 MT1AP04731 61 aa3.45□□□□□ -1.86
SGCA-205ENST00000505964 SYNE1Q8NF91 8797 aaKnown RBP3.45□□□□□ -1.86
SGCA-205ENST00000505964 KRTAP12-4P60329 112 aa3.42□□□□□ -1.86
SGCA-205ENST00000505964 KRTAP6-1Q3LI64 71 aa3.38□□□□□ -1.87
SGCA-205ENST00000505964 AHNAKQ09666 5890 aaKnown RBP3.37□□□□□ -1.87
SGCA-205ENST00000505964 A0A0A0MQY5 61 aa3.36□□□□□ -1.87
SGCA-205ENST00000505964 KRTAP4-11Q9BYQ6 195 aa3.36□□□□□ -1.87
SGCA-205ENST00000505964 MUC5ACP98088 5654 aa3.35□□□□□ -1.87
SGCA-205ENST00000505964 MUC5BQ9HC84 5762 aaPredicted RBP3.35□□□□□ -1.87
SGCA-205ENST00000505964 KRTAP5-8O75690 187 aa3.29□□□□□ -1.88
SGCA-205ENST00000505964 KRTAP9-4Q9BYQ2 154 aa3.29□□□□□ -1.88
SGCA-205ENST00000505964 OBSCNQ5VST9 7968 aa3.27□□□□□ -1.89
SGCA-205ENST00000505964 KRTAP5-2Q701N4 177 aa3.21□□□□□ -1.9
SGCA-205ENST00000505964 KRTAP9-9Q9BYP9 154 aa3.16□□□□□ -1.9
SGCA-205ENST00000505964 MT3P25713 68 aa3.14□□□□□ -1.91
SGCA-205ENST00000505964 KRTAP6-2Q3LI66 62 aa3.14□□□□□ -1.91
SGCA-205ENST00000505964 INE1O15225 51 aa3.11□□□□□ -1.91
SGCA-205ENST00000505964 KRTAP5-1Q6L8H4 278 aa2.96□□□□□ -1.94
SGCA-205ENST00000505964 LCE3DQ9BYE3 92 aa2.92□□□□□ -1.94
SGCA-205ENST00000505964 LCE3EQ5T5B0 92 aa2.83□□□□□ -1.96
SGCA-205ENST00000505964 LCE1EQ5T753 118 aa2.79□□□□□ -1.96
SGCA-205ENST00000505964 LCE1BQ5T7P3 118 aa2.62□□□□□ -1.99
SGCA-205ENST00000505964 KRTAP4-2Q9BYR5 136 aa2.59□□□□□ -1.99
SGCA-205ENST00000505964 LCE1CQ5T751 118 aa2.58□□□□□ -2
SGCA-205ENST00000505964 KRTAP4-12Q9BQ66 201 aa2.56□□□□□ -2
SGCA-205ENST00000505964 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.42□□□□□ -2.02
SGCA-205ENST00000505964 PRM1P04553 51 aa2.4□□□□□ -2.03
SGCA-205ENST00000505964 KRTAP5-11Q6L8G4 156 aa2.34□□□□□ -2.03
SGCA-205ENST00000505964 PHGR1C9JFL3 82 aa2.33□□□□□ -2.04
SGCA-205ENST00000505964 LCE1FQ5T754 118 aa2.28□□□□□ -2.04
SGCA-205ENST00000505964 KRTAP21-2Q3LI59 83 aa2.23□□□□□ -2.05
SGCA-205ENST00000505964 MUC19Q7Z5P9 8384 aa2.05□□□□□ -2.08
SGCA-205ENST00000505964 KRTAP4-4Q9BYR3 166 aa2□□□□□ -2.09
SGCA-205ENST00000505964 KRTAP21-1Q3LI58 79 aa1.73□□□□□ -2.13
SGCA-205ENST00000505964 MUC16Q8WXI7 14507 aa1.44□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 45.9 ms