RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 KRTAP19-5Q3LI72 72 aa5.82□□□□□ -1.48
PDLIM7-213ENST00000505074 MT1GP13640 62 aa5.8□□□□□ -1.48
PDLIM7-213ENST00000505074 KRTAP5-3Q6L8H2 238 aa5.8□□□□□ -1.48
PDLIM7-213ENST00000505074 KRTAP4-6Q9BYQ5 205 aa5.8□□□□□ -1.48
PDLIM7-213ENST00000505074 KRTAP12-1P59990 96 aa5.78□□□□□ -1.48
PDLIM7-213ENST00000505074 KRTAP5-4Q6L8H1 288 aa5.78□□□□□ -1.48
PDLIM7-213ENST00000505074 PP632Q6XCG6 107 aa5.78□□□□□ -1.48
PDLIM7-213ENST00000505074 SPRR5A0A1B0GTR4 108 aa5.77□□□□□ -1.49
PDLIM7-213ENST00000505074 PRR15LQ9BU68 103 aa5.77□□□□□ -1.49
PDLIM7-213ENST00000505074 A0A1B0GU69 56 aa5.75□□□□□ -1.49
PDLIM7-213ENST00000505074 PSPHP1O15172 72 aa5.73□□□□□ -1.49
PDLIM7-213ENST00000505074 MT1MQ8N339 61 aa5.68□□□□□ -1.5
PDLIM7-213ENST00000505074 MT1LQ93083 61 aa5.66□□□□□ -1.5
PDLIM7-213ENST00000505074 A8MU10 97 aa5.65□□□□□ -1.5
PDLIM7-213ENST00000505074 LCE3AQ5TA76 89 aa5.62□□□□□ -1.51
PDLIM7-213ENST00000505074 C10orf95Q9H7T3 257 aa5.62□□□□□ -1.51
PDLIM7-213ENST00000505074 TNP1P09430 55 aa5.6□□□□□ -1.51
PDLIM7-213ENST00000505074 A6NED7 52 aa5.59□□□□□ -1.51
PDLIM7-213ENST00000505074 UQCR11O14957 56 aa5.59□□□□□ -1.51
PDLIM7-213ENST00000505074 KRTAP4-3Q9BYR4 195 aa5.57□□□□□ -1.52
PDLIM7-213ENST00000505074 CDC42SE1Q9NRR8 79 aa5.53□□□□□ -1.52
PDLIM7-213ENST00000505074 MIR22HGQ0VDD5 57 aa5.51□□□□□ -1.53
PDLIM7-213ENST00000505074 KRTAP20-2Q3LI61 65 aa5.51□□□□□ -1.53
PDLIM7-213ENST00000505074 BRK1Q8WUW1 75 aa5.51□□□□□ -1.53
PDLIM7-213ENST00000505074 PRO0628Q9UI54 55 aa5.42□□□□□ -1.54
PDLIM7-213ENST00000505074 KRTAP12-3P60328 96 aa5.39□□□□□ -1.55
PDLIM7-213ENST00000505074 KRTAP4-7Q9BYR0 210 aa5.39□□□□□ -1.55
PDLIM7-213ENST00000505074 KRTAP12-4P60329 112 aa5.32□□□□□ -1.56
PDLIM7-213ENST00000505074 K7ERS5 55 aa5.29□□□□□ -1.56
PDLIM7-213ENST00000505074 KRTAP5-5Q701N2 237 aaPredicted RBP5.25□□□□□ -1.57
PDLIM7-213ENST00000505074 PMAIP1Q13794 54 aa5.21□□□□□ -1.58
PDLIM7-213ENST00000505074 KRTAP4-11Q9BYQ6 195 aa5.19□□□□□ -1.58
PDLIM7-213ENST00000505074 KRTAP25-1Q3LHN0 102 aa5.17□□□□□ -1.58
PDLIM7-213ENST00000505074 AHNAKQ09666 5890 aaKnown RBP5.15□□□□□ -1.58
PDLIM7-213ENST00000505074 MUC5ACP98088 5654 aa5.12□□□□□ -1.59
PDLIM7-213ENST00000505074 LOC100996750A0A140TA64 210 aa5.12□□□□□ -1.59
PDLIM7-213ENST00000505074 SYNE1Q8NF91 8797 aaKnown RBP5.1□□□□□ -1.59
PDLIM7-213ENST00000505074 KRTAP5-8O75690 187 aa5.05□□□□□ -1.6
PDLIM7-213ENST00000505074 ROMO1P60602 79 aa5.05□□□□□ -1.6
PDLIM7-213ENST00000505074 MUC5BQ9HC84 5762 aaPredicted RBP5.04□□□□□ -1.6
PDLIM7-213ENST00000505074 KTN1-AS1Q86SY8 53 aa5.03□□□□□ -1.6
PDLIM7-213ENST00000505074 KRTAP19-4Q3LI73 84 aa5□□□□□ -1.61
PDLIM7-213ENST00000505074 KRTAP15-1Q3LI76 137 aa4.97□□□□□ -1.61
PDLIM7-213ENST00000505074 KRTAP5-2Q701N4 177 aa4.94□□□□□ -1.62
PDLIM7-213ENST00000505074 LCE3CQ5T5A8 94 aa4.93□□□□□ -1.62
PDLIM7-213ENST00000505074 KRTAP9-9Q9BYP9 154 aa4.91□□□□□ -1.62
PDLIM7-213ENST00000505074 KRTAP23-1A1A580 65 aa4.9□□□□□ -1.63
PDLIM7-213ENST00000505074 PRAC1Q96KF2 57 aa4.85□□□□□ -1.63
PDLIM7-213ENST00000505074 OBSCNQ5VST9 7968 aa4.84□□□□□ -1.64
PDLIM7-213ENST00000505074 MT1AP04731 61 aa4.81□□□□□ -1.64
PDLIM7-213ENST00000505074 KRTAP6-1Q3LI64 71 aa4.8□□□□□ -1.64
PDLIM7-213ENST00000505074 KRTAP9-4Q9BYQ2 154 aa4.66□□□□□ -1.66
PDLIM7-213ENST00000505074 KRTAP9-6A8MVA2 160 aa4.63□□□□□ -1.67
PDLIM7-213ENST00000505074 KRTAP6-2Q3LI66 62 aa4.63□□□□□ -1.67
PDLIM7-213ENST00000505074 KRTAP5-1Q6L8H4 278 aa4.56□□□□□ -1.68
PDLIM7-213ENST00000505074 H3BS24 57 aa4.5□□□□□ -1.69
PDLIM7-213ENST00000505074 MT3P25713 68 aa4.42□□□□□ -1.7
PDLIM7-213ENST00000505074 LCE1EQ5T753 118 aa4.14□□□□□ -1.75
PDLIM7-213ENST00000505074 A0A0A0MQY5 61 aa4.06□□□□□ -1.76
PDLIM7-213ENST00000505074 LUZP6Q538Z0 58 aa4.01□□□□□ -1.77
PDLIM7-213ENST00000505074 LCE1BQ5T7P3 118 aa3.97□□□□□ -1.77
PDLIM7-213ENST00000505074 KRTAP4-2Q9BYR5 136 aa3.96□□□□□ -1.78
PDLIM7-213ENST00000505074 NDUFAF8A1L188 74 aa3.85□□□□□ -1.79
PDLIM7-213ENST00000505074 LCE1CQ5T751 118 aa3.84□□□□□ -1.79
PDLIM7-213ENST00000505074 KRTAP4-12Q9BQ66 201 aa3.84□□□□□ -1.79
PDLIM7-213ENST00000505074 KRTAP5-11Q6L8G4 156 aa3.64□□□□□ -1.83
PDLIM7-213ENST00000505074 LCE1FQ5T754 118 aa3.61□□□□□ -1.83
PDLIM7-213ENST00000505074 PHGR1C9JFL3 82 aa3.59□□□□□ -1.83
PDLIM7-213ENST00000505074 LCE3DQ9BYE3 92 aa3.54□□□□□ -1.84
PDLIM7-213ENST00000505074 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.4□□□□□ -1.87
PDLIM7-213ENST00000505074 INE1O15225 51 aa3.29□□□□□ -1.88
PDLIM7-213ENST00000505074 LCE3EQ5T5B0 92 aa3.29□□□□□ -1.88
PDLIM7-213ENST00000505074 KRTAP21-2Q3LI59 83 aa3.13□□□□□ -1.91
PDLIM7-213ENST00000505074 MUC19Q7Z5P9 8384 aa2.99□□□□□ -1.93
PDLIM7-213ENST00000505074 KRTAP4-4Q9BYR3 166 aa2.97□□□□□ -1.93
PDLIM7-213ENST00000505074 KRTAP21-1Q3LI58 79 aa2.74□□□□□ -1.97
PDLIM7-213ENST00000505074 PRM1P04553 51 aa2.62□□□□□ -1.99
PDLIM7-213ENST00000505074 MUC16Q8WXI7 14507 aa2.05□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 206 ms