RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 KRTAP10-7P60409 375 aaPredicted RBP3.87□□□□□ -1.79
NR1I3-220ENST00000505005 ROMO1P60602 79 aa3.87□□□□□ -1.79
NR1I3-220ENST00000505005 TNP1P09430 55 aa3.84□□□□□ -1.79
NR1I3-220ENST00000505005 LCE1AQ5T7P2 110 aa3.84□□□□□ -1.79
NR1I3-220ENST00000505005 NEBP20929 6669 aa3.83□□□□□ -1.8
NR1I3-220ENST00000505005 KRTAP5-3Q6L8H2 238 aa3.83□□□□□ -1.8
NR1I3-220ENST00000505005 PRAC1Q96KF2 57 aa3.83□□□□□ -1.8
NR1I3-220ENST00000505005 KTN1-AS1Q86SY8 53 aa3.82□□□□□ -1.8
NR1I3-220ENST00000505005 MUC12Q9UKN1 5478 aa3.82□□□□□ -1.8
NR1I3-220ENST00000505005 KMT2DO14686 5537 aa3.81□□□□□ -1.8
NR1I3-220ENST00000505005 SPRR2EP22531 72 aa3.81□□□□□ -1.8
NR1I3-220ENST00000505005 SPRR2BP35325 72 aa3.81□□□□□ -1.8
NR1I3-220ENST00000505005 SPRR2AP35326 72 aa3.81□□□□□ -1.8
NR1I3-220ENST00000505005 KRTAP25-1Q3LHN0 102 aa3.78□□□□□ -1.8
NR1I3-220ENST00000505005 KRTAP20-1Q3LI63 56 aa3.77□□□□□ -1.81
NR1I3-220ENST00000505005 C10orf95Q9H7T3 257 aa3.77□□□□□ -1.81
NR1I3-220ENST00000505005 KRTAP2-3P0C7H8 128 aa3.76□□□□□ -1.81
NR1I3-220ENST00000505005 KRTAP2-4Q9BYR9 128 aa3.76□□□□□ -1.81
NR1I3-220ENST00000505005 MT3P25713 68 aa3.75□□□□□ -1.81
NR1I3-220ENST00000505005 MDN1Q9NU22 5596 aa3.75□□□□□ -1.81
NR1I3-220ENST00000505005 SPRR2DP22532 72 aa3.7□□□□□ -1.82
NR1I3-220ENST00000505005 PP632Q6XCG6 107 aa3.68□□□□□ -1.82
NR1I3-220ENST00000505005 NDUFAF8A1L188 74 aa3.67□□□□□ -1.82
NR1I3-220ENST00000505005 KRTAP2-2Q9BYT5 123 aa3.65□□□□□ -1.83
NR1I3-220ENST00000505005 KRTAP2-1Q9BYU5 128 aa3.65□□□□□ -1.83
NR1I3-220ENST00000505005 KRTAP19-7Q3SYF9 63 aa3.64□□□□□ -1.83
NR1I3-220ENST00000505005 MT1EP04732 61 aa3.63□□□□□ -1.83
NR1I3-220ENST00000505005 MT1GP13640 62 aa3.62□□□□□ -1.83
NR1I3-220ENST00000505005 KRTAP19-3Q7Z4W3 81 aa3.62□□□□□ -1.83
NR1I3-220ENST00000505005 KRTAP19-5Q3LI72 72 aa3.6□□□□□ -1.83
NR1I3-220ENST00000505005 LCE3AQ5TA76 89 aa3.59□□□□□ -1.83
NR1I3-220ENST00000505005 KRTAP12-3P60328 96 aa3.54□□□□□ -1.84
NR1I3-220ENST00000505005 MT1LQ93083 61 aa3.49□□□□□ -1.85
NR1I3-220ENST00000505005 GPR98Q8WXG9 6306 aa3.49□□□□□ -1.85
NR1I3-220ENST00000505005 MT1MQ8N339 61 aa3.45□□□□□ -1.86
NR1I3-220ENST00000505005 DSTQ03001 7570 aaKnown RBP3.43□□□□□ -1.86
NR1I3-220ENST00000505005 LCE1FQ5T754 118 aa3.28□□□□□ -1.88
NR1I3-220ENST00000505005 LCE3CQ5T5A8 94 aa3.27□□□□□ -1.89
NR1I3-220ENST00000505005 KRTAP5-4Q6L8H1 288 aa3.23□□□□□ -1.89
NR1I3-220ENST00000505005 SPRR5A0A1B0GTR4 108 aa3.22□□□□□ -1.89
NR1I3-220ENST00000505005 KRTAP4-3Q9BYR4 195 aa3.22□□□□□ -1.89
NR1I3-220ENST00000505005 KRTAP12-4P60329 112 aa3.17□□□□□ -1.9
NR1I3-220ENST00000505005 MT4P47944 62 aa3.16□□□□□ -1.9
NR1I3-220ENST00000505005 KRTAP5-5Q701N2 237 aaPredicted RBP3.13□□□□□ -1.91
NR1I3-220ENST00000505005 LUZP6Q538Z0 58 aa3.08□□□□□ -1.92
NR1I3-220ENST00000505005 LCE1EQ5T753 118 aa3.08□□□□□ -1.92
NR1I3-220ENST00000505005 HMCN1Q96RW7 5635 aa3.07□□□□□ -1.92
NR1I3-220ENST00000505005 MT1AP04731 61 aa3.02□□□□□ -1.93
NR1I3-220ENST00000505005 KRTAP20-2Q3LI61 65 aa3.02□□□□□ -1.93
NR1I3-220ENST00000505005 KRTAP9-6A8MVA2 160 aa2.96□□□□□ -1.94
NR1I3-220ENST00000505005 AHNAK2Q8IVF2 5795 aa2.95□□□□□ -1.94
NR1I3-220ENST00000505005 SYNE1Q8NF91 8797 aaKnown RBP2.95□□□□□ -1.94
NR1I3-220ENST00000505005 KRTAP6-1Q3LI64 71 aa2.91□□□□□ -1.94
NR1I3-220ENST00000505005 KRTAP5-10Q6L8G5 202 aa2.91□□□□□ -1.94
NR1I3-220ENST00000505005 KRTAP5-7Q6L8G8 165 aa2.88□□□□□ -1.95
NR1I3-220ENST00000505005 KRTAP5-11Q6L8G4 156 aa2.86□□□□□ -1.95
NR1I3-220ENST00000505005 KRTAP5-2Q701N4 177 aa2.84□□□□□ -1.95
NR1I3-220ENST00000505005 LCE3EQ5T5B0 92 aa2.79□□□□□ -1.96
NR1I3-220ENST00000505005 KRTAP6-2Q3LI66 62 aa2.77□□□□□ -1.97
NR1I3-220ENST00000505005 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.73□□□□□ -1.97
NR1I3-220ENST00000505005 AHNAKQ09666 5890 aaKnown RBP2.63□□□□□ -1.99
NR1I3-220ENST00000505005 KRTAP5-8O75690 187 aa2.61□□□□□ -1.99
NR1I3-220ENST00000505005 OBSCNQ5VST9 7968 aa2.6□□□□□ -1.99
NR1I3-220ENST00000505005 MUC5ACP98088 5654 aa2.53□□□□□ -2
NR1I3-220ENST00000505005 INE1O15225 51 aa2.51□□□□□ -2.01
NR1I3-220ENST00000505005 MUC5BQ9HC84 5762 aaPredicted RBP2.51□□□□□ -2.01
NR1I3-220ENST00000505005 KRTAP5-1Q6L8H4 278 aa2.5□□□□□ -2.01
NR1I3-220ENST00000505005 LCE3DQ9BYE3 92 aa2.43□□□□□ -2.02
NR1I3-220ENST00000505005 LCE1CQ5T751 118 aa2.36□□□□□ -2.03
NR1I3-220ENST00000505005 LCE1BQ5T7P3 118 aa2.36□□□□□ -2.03
NR1I3-220ENST00000505005 KRTAP4-4Q9BYR3 166 aa2.27□□□□□ -2.05
NR1I3-220ENST00000505005 PRM1P04553 51 aa1.96□□□□□ -2.1
NR1I3-220ENST00000505005 KRTAP21-2Q3LI59 83 aa1.92□□□□□ -2.1
NR1I3-220ENST00000505005 PHGR1C9JFL3 82 aa1.8□□□□□ -2.12
NR1I3-220ENST00000505005 MUC19Q7Z5P9 8384 aa1.58□□□□□ -2.16
NR1I3-220ENST00000505005 KRTAP21-1Q3LI58 79 aa1.36□□□□□ -2.19
NR1I3-220ENST00000505005 MUC16Q8WXI7 14507 aa1.15□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 74.6 ms