RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 MUC5BQ9HC84 5762 aaPredicted RBP2.02□□□□□ -2.09
LMNB1-208ENST00000504788 KRTAP12-2P59991 146 aa2.02□□□□□ -2.09
LMNB1-208ENST00000504788 KRTAP4-4Q9BYR3 166 aa2.02□□□□□ -2.09
LMNB1-208ENST00000504788 PLAC4Q8WY50 150 aa2.01□□□□□ -2.09
LMNB1-208ENST00000504788 ROMO1P60602 79 aa2□□□□□ -2.09
LMNB1-208ENST00000504788 KRTAP10-12P60413 245 aa1.99□□□□□ -2.09
LMNB1-208ENST00000504788 A0A0D9SG42 100 aa1.98□□□□□ -2.09
LMNB1-208ENST00000504788 MT3P25713 68 aa1.98□□□□□ -2.09
LMNB1-208ENST00000504788 PRO2289Q9P1D8 64 aa1.98□□□□□ -2.09
LMNB1-208ENST00000504788 SYNE2Q8WXH0 6885 aaKnown RBP1.97□□□□□ -2.09
LMNB1-208ENST00000504788 UQCR11O14957 56 aa1.97□□□□□ -2.09
LMNB1-208ENST00000504788 MUC12Q9UKN1 5478 aa1.96□□□□□ -2.1
LMNB1-208ENST00000504788 KRTAP6-3Q3LI67 103 aa1.96□□□□□ -2.1
LMNB1-208ENST00000504788 KRTAP2-2Q9BYT5 123 aa1.96□□□□□ -2.1
LMNB1-208ENST00000504788 NDUFAF8A1L188 74 aa1.95□□□□□ -2.1
LMNB1-208ENST00000504788 MIR22HGQ0VDD5 57 aa1.94□□□□□ -2.1
LMNB1-208ENST00000504788 C10orf95Q9H7T3 257 aa1.94□□□□□ -2.1
LMNB1-208ENST00000504788 KRTAP25-1Q3LHN0 102 aa1.94□□□□□ -2.1
LMNB1-208ENST00000504788 SPINT4Q6UDR6 99 aa1.94□□□□□ -2.1
LMNB1-208ENST00000504788 CAMK2N1Q7Z7J9 78 aa1.91□□□□□ -2.1
LMNB1-208ENST00000504788 MDN1Q9NU22 5596 aa1.89□□□□□ -2.11
LMNB1-208ENST00000504788 KRTAP19-7Q3SYF9 63 aa1.89□□□□□ -2.11
LMNB1-208ENST00000504788 KRTAP8-1Q8IUC2 63 aa1.88□□□□□ -2.11
LMNB1-208ENST00000504788 SPRR2FQ96RM1 72 aa1.86□□□□□ -2.11
LMNB1-208ENST00000504788 MT1EP04732 61 aa1.84□□□□□ -2.12
LMNB1-208ENST00000504788 LCE3AQ5TA76 89 aa1.84□□□□□ -2.12
LMNB1-208ENST00000504788 TNP1P09430 55 aa1.83□□□□□ -2.12
LMNB1-208ENST00000504788 KRTAP19-5Q3LI72 72 aa1.82□□□□□ -2.12
LMNB1-208ENST00000504788 NEBP20929 6669 aa1.81□□□□□ -2.12
LMNB1-208ENST00000504788 OBSCNQ5VST9 7968 aa1.8□□□□□ -2.12
LMNB1-208ENST00000504788 KRTAP20-1Q3LI63 56 aa1.8□□□□□ -2.12
LMNB1-208ENST00000504788 LUZP6Q538Z0 58 aa1.8□□□□□ -2.12
LMNB1-208ENST00000504788 K7ERS5 55 aa1.8□□□□□ -2.12
LMNB1-208ENST00000504788 SPRR2EP22531 72 aa1.79□□□□□ -2.12
LMNB1-208ENST00000504788 SPRR2BP35325 72 aa1.79□□□□□ -2.12
LMNB1-208ENST00000504788 SPRR2AP35326 72 aa1.79□□□□□ -2.12
LMNB1-208ENST00000504788 KRTAP19-3Q7Z4W3 81 aa1.78□□□□□ -2.12
LMNB1-208ENST00000504788 MT1LQ93083 61 aa1.77□□□□□ -2.13
LMNB1-208ENST00000504788 KRTAP12-3P60328 96 aa1.75□□□□□ -2.13
LMNB1-208ENST00000504788 KRTAP4-3Q9BYR4 195 aa1.75□□□□□ -2.13
LMNB1-208ENST00000504788 KRTAP9-6A8MVA2 160 aa1.75□□□□□ -2.13
LMNB1-208ENST00000504788 MT1GP13640 62 aa1.75□□□□□ -2.13
LMNB1-208ENST00000504788 MT1MQ8N339 61 aa1.74□□□□□ -2.13
LMNB1-208ENST00000504788 DSTQ03001 7570 aaKnown RBP1.73□□□□□ -2.13
LMNB1-208ENST00000504788 KRTAP5-2Q701N4 177 aa1.73□□□□□ -2.13
LMNB1-208ENST00000504788 KRTAP2-3P0C7H8 128 aa1.72□□□□□ -2.13
LMNB1-208ENST00000504788 SPRR2DP22532 72 aa1.72□□□□□ -2.13
LMNB1-208ENST00000504788 KRTAP2-4Q9BYR9 128 aa1.72□□□□□ -2.13
LMNB1-208ENST00000504788 PP632Q6XCG6 107 aa1.69□□□□□ -2.14
LMNB1-208ENST00000504788 KRTAP2-1Q9BYU5 128 aa1.67□□□□□ -2.14
LMNB1-208ENST00000504788 KRTAP5-5Q701N2 237 aaPredicted RBP1.66□□□□□ -2.14
LMNB1-208ENST00000504788 LCE3CQ5T5A8 94 aa1.64□□□□□ -2.15
LMNB1-208ENST00000504788 LCE1FQ5T754 118 aa1.63□□□□□ -2.15
LMNB1-208ENST00000504788 AHNAKQ09666 5890 aaKnown RBP1.54□□□□□ -2.16
LMNB1-208ENST00000504788 SPRR5A0A1B0GTR4 108 aa1.54□□□□□ -2.16
LMNB1-208ENST00000504788 KRTAP5-8O75690 187 aa1.54□□□□□ -2.16
LMNB1-208ENST00000504788 SYNE1Q8NF91 8797 aaKnown RBP1.53□□□□□ -2.17
LMNB1-208ENST00000504788 INE1O15225 51 aa1.51□□□□□ -2.17
LMNB1-208ENST00000504788 MT1AP04731 61 aa1.5□□□□□ -2.17
LMNB1-208ENST00000504788 MT4P47944 62 aa1.5□□□□□ -2.17
LMNB1-208ENST00000504788 KRTAP6-1Q3LI64 71 aa1.5□□□□□ -2.17
LMNB1-208ENST00000504788 KRTAP20-2Q3LI61 65 aa1.49□□□□□ -2.17
LMNB1-208ENST00000504788 AHNAK2Q8IVF2 5795 aa1.45□□□□□ -2.18
LMNB1-208ENST00000504788 KRTAP12-4P60329 112 aa1.44□□□□□ -2.18
LMNB1-208ENST00000504788 KRTAP5-10Q6L8G5 202 aa1.41□□□□□ -2.18
LMNB1-208ENST00000504788 KRTAP6-2Q3LI66 62 aa1.39□□□□□ -2.19
LMNB1-208ENST00000504788 KRTAP5-7Q6L8G8 165 aa1.38□□□□□ -2.19
LMNB1-208ENST00000504788 LCE1CQ5T751 118 aa1.35□□□□□ -2.19
LMNB1-208ENST00000504788 LCE1BQ5T7P3 118 aa1.35□□□□□ -2.19
LMNB1-208ENST00000504788 LCE3EQ5T5B0 92 aa1.34□□□□□ -2.19
LMNB1-208ENST00000504788 MUC5ACP98088 5654 aa1.23□□□□□ -2.21
LMNB1-208ENST00000504788 LCE3DQ9BYE3 92 aa1.19□□□□□ -2.22
LMNB1-208ENST00000504788 MUC19Q7Z5P9 8384 aa1.17□□□□□ -2.22
LMNB1-208ENST00000504788 KRTAP21-2Q3LI59 83 aa1.02□□□□□ -2.25
LMNB1-208ENST00000504788 PRM1P04553 51 aa0.96□□□□□ -2.26
LMNB1-208ENST00000504788 PHGR1C9JFL3 82 aa0.89□□□□□ -2.27
LMNB1-208ENST00000504788 KRTAP21-1Q3LI58 79 aa0.66□□□□□ -2.3
LMNB1-208ENST00000504788 MUC16Q8WXI7 14507 aa0.53□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 6.7 ms