RNA–Protein interactions for RNA: ENST00000504417.1

ITGA3-203, Transcript of integrin subunit alpha 3, humanhuman

TSL 3

Gene ITGA3, Length 227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-203ENST00000504417 MIR22HGQ0VDD5 57 aa2.9□□□□□ -1.95
ITGA3-203ENST00000504417 PLAC4Q8WY50 150 aa2.89□□□□□ -1.95
ITGA3-203ENST00000504417 KRTAP10-7P60409 375 aaPredicted RBP2.88□□□□□ -1.95
ITGA3-203ENST00000504417 KRTAP10-12P60413 245 aa2.88□□□□□ -1.95
ITGA3-203ENST00000504417 KRTAP20-1Q3LI63 56 aa2.88□□□□□ -1.95
ITGA3-203ENST00000504417 LINC01554Q52M75 96 aa2.88□□□□□ -1.95
ITGA3-203ENST00000504417 SPRR2FQ96RM1 72 aa2.87□□□□□ -1.95
ITGA3-203ENST00000504417 KRTAP13-4Q3LI77 160 aa2.86□□□□□ -1.95
ITGA3-203ENST00000504417 KRTAP8-1Q8IUC2 63 aa2.85□□□□□ -1.95
ITGA3-203ENST00000504417 SPRR2EP22531 72 aa2.83□□□□□ -1.96
ITGA3-203ENST00000504417 SPRR2BP35325 72 aa2.83□□□□□ -1.96
ITGA3-203ENST00000504417 SPRR2AP35326 72 aa2.83□□□□□ -1.96
ITGA3-203ENST00000504417 A0A1B0GU33 70 aa2.82□□□□□ -1.96
ITGA3-203ENST00000504417 K7ERS5 55 aa2.81□□□□□ -1.96
ITGA3-203ENST00000504417 KRTAP2-3P0C7H8 128 aa2.81□□□□□ -1.96
ITGA3-203ENST00000504417 KRTAP2-4Q9BYR9 128 aa2.81□□□□□ -1.96
ITGA3-203ENST00000504417 A0A0D9SG42 100 aa2.77□□□□□ -1.97
ITGA3-203ENST00000504417 SPRR2DP22532 72 aa2.73□□□□□ -1.97
ITGA3-203ENST00000504417 KRTAP19-7Q3SYF9 63 aa2.73□□□□□ -1.97
ITGA3-203ENST00000504417 SPINT4Q6UDR6 99 aa2.73□□□□□ -1.97
ITGA3-203ENST00000504417 CAMK2N1Q7Z7J9 78 aa2.73□□□□□ -1.97
ITGA3-203ENST00000504417 KRTAP2-1Q9BYU5 128 aa2.72□□□□□ -1.97
ITGA3-203ENST00000504417 KRTAP12-1P59990 96 aa2.71□□□□□ -1.98
ITGA3-203ENST00000504417 KRTAP25-1Q3LHN0 102 aa2.7□□□□□ -1.98
ITGA3-203ENST00000504417 LCE3CQ5T5A8 94 aa2.7□□□□□ -1.98
ITGA3-203ENST00000504417 LCE1EQ5T753 118 aa2.69□□□□□ -1.98
ITGA3-203ENST00000504417 MT1EP04732 61 aa2.68□□□□□ -1.98
ITGA3-203ENST00000504417 ROMO1P60602 79 aa2.66□□□□□ -1.98
ITGA3-203ENST00000504417 KRTAP19-3Q7Z4W3 81 aa2.64□□□□□ -1.99
ITGA3-203ENST00000504417 KRTAP19-5Q3LI72 72 aa2.6□□□□□ -1.99
ITGA3-203ENST00000504417 C10orf95Q9H7T3 257 aa2.6□□□□□ -1.99
ITGA3-203ENST00000504417 KRTAP5-11Q6L8G4 156 aa2.57□□□□□ -2
ITGA3-203ENST00000504417 MT1LQ93083 61 aa2.56□□□□□ -2
ITGA3-203ENST00000504417 TNP1P09430 55 aa2.55□□□□□ -2
ITGA3-203ENST00000504417 MT1GP13640 62 aa2.55□□□□□ -2
ITGA3-203ENST00000504417 MT1MQ8N339 61 aa2.55□□□□□ -2
ITGA3-203ENST00000504417 LCE3AQ5TA76 89 aa2.54□□□□□ -2
ITGA3-203ENST00000504417 DSTQ03001 7570 aaKnown RBP2.53□□□□□ -2
ITGA3-203ENST00000504417 HMCN1Q96RW7 5635 aa2.49□□□□□ -2.01
ITGA3-203ENST00000504417 KRTAP5-4Q6L8H1 288 aa2.48□□□□□ -2.01
ITGA3-203ENST00000504417 KRTAP4-3Q9BYR4 195 aa2.48□□□□□ -2.01
ITGA3-203ENST00000504417 KRTAP9-6A8MVA2 160 aa2.47□□□□□ -2.01
ITGA3-203ENST00000504417 PP632Q6XCG6 107 aa2.47□□□□□ -2.01
ITGA3-203ENST00000504417 LCE3EQ5T5B0 92 aa2.46□□□□□ -2.02
ITGA3-203ENST00000504417 AHNAK2Q8IVF2 5795 aa2.43□□□□□ -2.02
ITGA3-203ENST00000504417 GPR98Q8WXG9 6306 aa2.42□□□□□ -2.02
ITGA3-203ENST00000504417 KRTAP12-3P60328 96 aa2.42□□□□□ -2.02
ITGA3-203ENST00000504417 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.4□□□□□ -2.03
ITGA3-203ENST00000504417 KRTAP5-5Q701N2 237 aaPredicted RBP2.39□□□□□ -2.03
ITGA3-203ENST00000504417 MT4P47944 62 aa2.38□□□□□ -2.03
ITGA3-203ENST00000504417 LUZP6Q538Z0 58 aa2.33□□□□□ -2.04
ITGA3-203ENST00000504417 KRTAP5-10Q6L8G5 202 aa2.33□□□□□ -2.04
ITGA3-203ENST00000504417 KRTAP20-2Q3LI61 65 aa2.3□□□□□ -2.04
ITGA3-203ENST00000504417 SPRR5A0A1B0GTR4 108 aa2.27□□□□□ -2.05
ITGA3-203ENST00000504417 KRTAP5-7Q6L8G8 165 aa2.23□□□□□ -2.05
ITGA3-203ENST00000504417 SYNE1Q8NF91 8797 aaKnown RBP2.2□□□□□ -2.06
ITGA3-203ENST00000504417 KRTAP12-4P60329 112 aa2.19□□□□□ -2.06
ITGA3-203ENST00000504417 KRTAP5-2Q701N4 177 aa2.19□□□□□ -2.06
ITGA3-203ENST00000504417 MT1AP04731 61 aa2.18□□□□□ -2.06
ITGA3-203ENST00000504417 KRTAP6-1Q3LI64 71 aa2.17□□□□□ -2.06
ITGA3-203ENST00000504417 KRTAP5-1Q6L8H4 278 aa2.11□□□□□ -2.07
ITGA3-203ENST00000504417 INE1O15225 51 aa2.07□□□□□ -2.08
ITGA3-203ENST00000504417 LCE3DQ9BYE3 92 aa2.07□□□□□ -2.08
ITGA3-203ENST00000504417 KRTAP5-8O75690 187 aa2.04□□□□□ -2.08
ITGA3-203ENST00000504417 KRTAP6-2Q3LI66 62 aa2.04□□□□□ -2.08
ITGA3-203ENST00000504417 MUC5BQ9HC84 5762 aaPredicted RBP2□□□□□ -2.09
ITGA3-203ENST00000504417 KRTAP4-4Q9BYR3 166 aa1.98□□□□□ -2.09
ITGA3-203ENST00000504417 AHNAKQ09666 5890 aaKnown RBP1.94□□□□□ -2.1
ITGA3-203ENST00000504417 MUC5ACP98088 5654 aa1.94□□□□□ -2.1
ITGA3-203ENST00000504417 OBSCNQ5VST9 7968 aa1.85□□□□□ -2.11
ITGA3-203ENST00000504417 LCE1CQ5T751 118 aa1.8□□□□□ -2.12
ITGA3-203ENST00000504417 LCE1BQ5T7P3 118 aa1.8□□□□□ -2.12
ITGA3-203ENST00000504417 KRTAP21-2Q3LI59 83 aa1.45□□□□□ -2.18
ITGA3-203ENST00000504417 MUC19Q7Z5P9 8384 aa1.37□□□□□ -2.19
ITGA3-203ENST00000504417 PRM1P04553 51 aa1.37□□□□□ -2.19
ITGA3-203ENST00000504417 PHGR1C9JFL3 82 aa1.33□□□□□ -2.2
ITGA3-203ENST00000504417 KRTAP21-1Q3LI58 79 aa0.99□□□□□ -2.25
ITGA3-203ENST00000504417 MUC16Q8WXI7 14507 aa0.87□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 36.8 ms