RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 KRTAP25-1Q3LHN0 102 aa4.94□□□□□ -1.62
PDLIM7-212ENST00000504380 BRK1Q8WUW1 75 aa4.94□□□□□ -1.62
PDLIM7-212ENST00000504380 ROMO1P60602 79 aa4.91□□□□□ -1.62
PDLIM7-212ENST00000504380 MT1EP04732 61 aa4.9□□□□□ -1.63
PDLIM7-212ENST00000504380 LCE3BQ5TA77 95 aa4.88□□□□□ -1.63
PDLIM7-212ENST00000504380 DSTQ03001 7570 aaKnown RBP4.79□□□□□ -1.64
PDLIM7-212ENST00000504380 KRTAP12-3P60328 96 aa4.78□□□□□ -1.64
PDLIM7-212ENST00000504380 KRTAP19-3Q7Z4W3 81 aa4.78□□□□□ -1.64
PDLIM7-212ENST00000504380 KRTAP23-1A1A580 65 aa4.74□□□□□ -1.65
PDLIM7-212ENST00000504380 MT1LQ93083 61 aa4.74□□□□□ -1.65
PDLIM7-212ENST00000504380 LCE5AQ5TCM9 118 aa4.73□□□□□ -1.65
PDLIM7-212ENST00000504380 MT1GP13640 62 aa4.68□□□□□ -1.66
PDLIM7-212ENST00000504380 KRTAP4-9Q9BYQ8 210 aa4.68□□□□□ -1.66
PDLIM7-212ENST00000504380 PMAIP1Q13794 54 aa4.64□□□□□ -1.67
PDLIM7-212ENST00000504380 PP632Q6XCG6 107 aa4.64□□□□□ -1.67
PDLIM7-212ENST00000504380 MT1MQ8N339 61 aa4.64□□□□□ -1.67
PDLIM7-212ENST00000504380 KRTAP4-7Q9BYR0 210 aa4.6□□□□□ -1.67
PDLIM7-212ENST00000504380 KRTAP4-3Q9BYR4 195 aa4.6□□□□□ -1.67
PDLIM7-212ENST00000504380 KRTAP15-1Q3LI76 137 aa4.57□□□□□ -1.68
PDLIM7-212ENST00000504380 PRO0628Q9UI54 55 aa4.56□□□□□ -1.68
PDLIM7-212ENST00000504380 LCE1DQ5T752 114 aa4.52□□□□□ -1.69
PDLIM7-212ENST00000504380 KRTAP5-10Q6L8G5 202 aa4.52□□□□□ -1.69
PDLIM7-212ENST00000504380 HMCN1Q96RW7 5635 aa4.5□□□□□ -1.69
PDLIM7-212ENST00000504380 KRTAP19-4Q3LI73 84 aa4.48□□□□□ -1.69
PDLIM7-212ENST00000504380 PRAC1Q96KF2 57 aa4.47□□□□□ -1.69
PDLIM7-212ENST00000504380 AHNAK2Q8IVF2 5795 aa4.46□□□□□ -1.7
PDLIM7-212ENST00000504380 LCE3CQ5T5A8 94 aa4.44□□□□□ -1.7
PDLIM7-212ENST00000504380 KRTAP5-7Q6L8G8 165 aa4.43□□□□□ -1.7
PDLIM7-212ENST00000504380 LCE4AQ5TA78 99 aa4.39□□□□□ -1.71
PDLIM7-212ENST00000504380 MT4P47944 62 aa4.35□□□□□ -1.71
PDLIM7-212ENST00000504380 LOC100996750A0A140TA64 210 aa4.33□□□□□ -1.72
PDLIM7-212ENST00000504380 KTN1-AS1Q86SY8 53 aa4.29□□□□□ -1.72
PDLIM7-212ENST00000504380 KRTAP5-3Q6L8H2 238 aa4.28□□□□□ -1.72
PDLIM7-212ENST00000504380 KRTAP5-4Q6L8H1 288 aa4.24□□□□□ -1.73
PDLIM7-212ENST00000504380 KRTAP9-6A8MVA2 160 aa4.22□□□□□ -1.73
PDLIM7-212ENST00000504380 KRTAP4-6Q9BYQ5 205 aa4.22□□□□□ -1.73
PDLIM7-212ENST00000504380 KRTAP5-5Q701N2 237 aaPredicted RBP4.2□□□□□ -1.74
PDLIM7-212ENST00000504380 SPRR5A0A1B0GTR4 108 aa4.19□□□□□ -1.74
PDLIM7-212ENST00000504380 SVIPQ8NHG7 77 aa4.11□□□□□ -1.75
PDLIM7-212ENST00000504380 MT1AP04731 61 aa4.03□□□□□ -1.76
PDLIM7-212ENST00000504380 KRTAP6-1Q3LI64 71 aa4.02□□□□□ -1.77
PDLIM7-212ENST00000504380 KRTAP20-2Q3LI61 65 aa4□□□□□ -1.77
PDLIM7-212ENST00000504380 KRTAP12-4P60329 112 aa3.99□□□□□ -1.77
PDLIM7-212ENST00000504380 SYNE1Q8NF91 8797 aaKnown RBP3.96□□□□□ -1.78
PDLIM7-212ENST00000504380 AHNAKQ09666 5890 aaKnown RBP3.88□□□□□ -1.79
PDLIM7-212ENST00000504380 KRTAP9-4Q9BYQ2 154 aa3.86□□□□□ -1.79
PDLIM7-212ENST00000504380 MUC5ACP98088 5654 aa3.85□□□□□ -1.79
PDLIM7-212ENST00000504380 KRTAP4-11Q9BYQ6 195 aa3.79□□□□□ -1.8
PDLIM7-212ENST00000504380 MUC5BQ9HC84 5762 aaPredicted RBP3.78□□□□□ -1.8
PDLIM7-212ENST00000504380 KRTAP6-2Q3LI66 62 aa3.77□□□□□ -1.81
PDLIM7-212ENST00000504380 KRTAP5-2Q701N4 177 aa3.74□□□□□ -1.81
PDLIM7-212ENST00000504380 KRTAP5-8O75690 187 aa3.71□□□□□ -1.82
PDLIM7-212ENST00000504380 MT3P25713 68 aa3.65□□□□□ -1.83
PDLIM7-212ENST00000504380 LUZP6Q538Z0 58 aa3.61□□□□□ -1.83
PDLIM7-212ENST00000504380 OBSCNQ5VST9 7968 aa3.57□□□□□ -1.84
PDLIM7-212ENST00000504380 KRTAP9-9Q9BYP9 154 aa3.57□□□□□ -1.84
PDLIM7-212ENST00000504380 KRTAP5-1Q6L8H4 278 aa3.34□□□□□ -1.87
PDLIM7-212ENST00000504380 NDUFAF8A1L188 74 aa3.29□□□□□ -1.88
PDLIM7-212ENST00000504380 LCE3DQ9BYE3 92 aa3.25□□□□□ -1.89
PDLIM7-212ENST00000504380 LCE1EQ5T753 118 aa3.24□□□□□ -1.89
PDLIM7-212ENST00000504380 LCE3EQ5T5B0 92 aa3.12□□□□□ -1.91
PDLIM7-212ENST00000504380 LCE1BQ5T7P3 118 aa3.12□□□□□ -1.91
PDLIM7-212ENST00000504380 KRTAP4-2Q9BYR5 136 aa3.09□□□□□ -1.91
PDLIM7-212ENST00000504380 LCE1CQ5T751 118 aa3.02□□□□□ -1.93
PDLIM7-212ENST00000504380 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.77□□□□□ -1.97
PDLIM7-212ENST00000504380 KRTAP4-12Q9BQ66 201 aa2.76□□□□□ -1.97
PDLIM7-212ENST00000504380 A0A0A0MQY5 61 aa2.71□□□□□ -1.98
PDLIM7-212ENST00000504380 KRTAP5-11Q6L8G4 156 aa2.7□□□□□ -1.98
PDLIM7-212ENST00000504380 INE1O15225 51 aa2.66□□□□□ -1.98
PDLIM7-212ENST00000504380 LCE1FQ5T754 118 aa2.65□□□□□ -1.99
PDLIM7-212ENST00000504380 PHGR1C9JFL3 82 aa2.62□□□□□ -1.99
PDLIM7-212ENST00000504380 KRTAP21-2Q3LI59 83 aa2.62□□□□□ -1.99
PDLIM7-212ENST00000504380 PRM1P04553 51 aa2.56□□□□□ -2
PDLIM7-212ENST00000504380 KRTAP4-4Q9BYR3 166 aa2.42□□□□□ -2.02
PDLIM7-212ENST00000504380 MUC19Q7Z5P9 8384 aa2.22□□□□□ -2.05
PDLIM7-212ENST00000504380 H3BS24 57 aa2.12□□□□□ -2.07
PDLIM7-212ENST00000504380 KRTAP21-1Q3LI58 79 aa2.02□□□□□ -2.09
PDLIM7-212ENST00000504380 MUC16Q8WXI7 14507 aa1.54□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 59 ms